EnhancerDB
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  3. vista42728[chr3:149108520-149108892]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42728[chr3:149108520-149108892]
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Tissue distribution of vista42728
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Transcription factor that possibly regulate vista42728[chr3:149108520-149108892]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149108522 149108538 POU4F3 JASPAR yes 6489652
chr3 149108522 149108538 POU4F3 JASPAR yes 71064895
chr3 149108525 149108536 DMRT3 JASPAR yes 6489653
chr3 149108525 149108536 DMRT3 JASPAR yes 71064896
chr3 149108527 149108539 TEF JASPAR yes 6489654
chr3 149108527 149108539 TEF JASPAR yes 71064897
chr3 149108534 149108537 MYB TRANSFAC yes 6489655
chr3 149108534 149108537 MYB TRANSFAC yes 71064898
chr3 149108547 149108551 YY1 TRANSFAC yes 6489656
chr3 149108547 149108551 YY1 TRANSFAC yes 71064899
chr3 149108571 149108581 TEAD4 JASPAR yes 6489657
chr3 149108571 149108581 TEAD4 JASPAR yes 71064900
chr3 149108595 149108604 CDX1 JASPAR yes 6489658
chr3 149108595 149108604 CDX1 JASPAR yes 71064901
chr3 149108595 149108606 CDX2 JASPAR yes 6489659
chr3 149108595 149108606 CDX2 JASPAR yes 71064902
chr3 149108596 149108607 BATF JASPAR yes 6489660
chr3 149108596 149108607 BATF JASPAR yes 71064903
chr3 149108597 149108608 JUNB JASPAR yes 6489661
chr3 149108597 149108608 JUNB JASPAR yes 71064904
chr3 149108598 149108609 JUND JASPAR yes 6489662
chr3 149108598 149108609 JUND JASPAR yes 71064905
chr3 149108599 149108608 JDP2 JASPAR yes 6489663
chr3 149108599 149108608 JDP2 JASPAR yes 71064906
chr3 149108612 149108621 JDP2 JASPAR yes 6489664
chr3 149108612 149108621 JDP2 JASPAR yes 71064907
chr3 149108612 149108626 JUN JASPAR yes 6489665
chr3 149108612 149108626 JUN JASPAR yes 71064908
chr3 149108634 149108642 OTX2 JASPAR yes 6489666
chr3 149108634 149108642 OTX2 JASPAR yes 71064909
chr3 149108641 149108653 PBX1 JASPAR yes 6489667
chr3 149108641 149108653 PBX1 JASPAR yes 71064910
chr3 149108644 149108649 NFY TRANSFAC yes 6489668
chr3 149108644 149108649 NFY TRANSFAC yes 71064911
chr3 149108662 149108675 EOMES JASPAR yes 6489669
chr3 149108662 149108675 EOMES JASPAR yes 71064912
chr3 149108663 149108671 MGA JASPAR yes 6489670
chr3 149108663 149108671 MGA JASPAR yes 71064913
chr3 149108675 149108693 NFYA JASPAR yes 6489671
chr3 149108675 149108693 NFYA JASPAR yes 71064914
chr3 149108676 149108687 FOXC1 JASPAR yes 6489672
chr3 149108676 149108687 FOXC1 JASPAR yes 71064915
chr3 149108678 149108694 NFYA JASPAR yes 6489673
chr3 149108678 149108694 NFYA JASPAR yes 71064916
chr3 149108721 149108736 TFAP2A JASPAR yes 6489674
chr3 149108721 149108736 TFAP2C JASPAR yes 6489675
chr3 149108721 149108736 TFAP2A JASPAR yes 71064917
chr3 149108721 149108736 TFAP2C JASPAR yes 71064918
chr3 149108723 149108738 TFAP2A JASPAR yes 6489676
chr3 149108723 149108738 TFAP2C JASPAR yes 6489677
chr3 149108723 149108738 TFAP2A JASPAR yes 71064919
chr3 149108723 149108738 TFAP2C JASPAR yes 71064920
chr3 149108724 149108735 TFAP2A JASPAR yes 6489678
chr3 149108724 149108735 TFAP2B JASPAR yes 6489679
chr3 149108724 149108735 TFAP2C JASPAR yes 6489680
chr3 149108724 149108735 TFAP2A JASPAR yes 71064921
chr3 149108724 149108735 TFAP2B JASPAR yes 71064922
chr3 149108724 149108735 TFAP2C JASPAR yes 71064923
chr3 149108730 149108745 HNF4G JASPAR yes 6489681
chr3 149108730 149108745 HNF4G JASPAR yes 71064924
chr3 149108739 149108758 CTCF JASPAR yes 6489682
chr3 149108739 149108758 CTCF JASPAR yes 71064925
chr3 149108774 149108780 YY1 JASPAR yes 6489683
chr3 149108774 149108780 YY1 JASPAR yes 71064926
chr3 149108777 149108783 ZNF354C JASPAR yes 6489684
chr3 149108777 149108783 ZNF354C JASPAR yes 71064927
chr3 149108799 149108809 NFKB1 JASPAR yes 6489685
chr3 149108799 149108809 NFKB1 JASPAR yes 71064928
chr3 149108816 149108821 ETS2 TRANSFAC yes 6489686
chr3 149108816 149108821 ETS2 TRANSFAC yes 71064929
chr3 149108821 149108832 NFE2L2 JASPAR yes 6489687
chr3 149108821 149108832 NFE2L2 JASPAR yes 71064930
chr3 149108824 149108830 ATF1 TRANSFAC yes 6489688
chr3 149108824 149108830 ATF1 TRANSFAC yes 71064931
chr3 149108824 149108836 CREB1 JASPAR yes 6489689
chr3 149108824 149108836 CREB1 JASPAR yes 71064932
chr3 149108843 149108849 SP1 TRANSFAC yes 6489690
chr3 149108843 149108849 SP1 TRANSFAC yes 71064933
chr3 149108860 149108866 YY1 JASPAR yes 6489691
chr3 149108860 149108866 YY1 JASPAR yes 71064934
chr3 149108868 149108871 MYB TRANSFAC yes 6489692
chr3 149108868 149108871 MYB TRANSFAC yes 71064935
chr3 149108880 149108885 SP1 TRANSFAC yes 6489693
chr3 149108880 149108885 SP1 TRANSFAC yes 71064936
SNP sites on vista42728[chr3:149108520-149108892]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149108760 rs115379917 G A,T no 7101060
Genes possibly regulated by vista42728[chr3:149108520-149108892]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149036285 149052201 - TM4SF18 ENSG00000163762.2 149052201 0.82 0.96 4173 43681
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 0.82 0.88 4174 87132
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 17131
Expression level of Genes
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miRNAs possibly regulated by vista42728[chr3:149108520-149108892]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results