EnhancerDB
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  3. vista42729[chr3:149113631-149114007]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42729[chr3:149113631-149114007]
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Tissue distribution of vista42729
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Transcription factor that possibly regulate vista42729[chr3:149113631-149114007]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149113635 149113649 RORA JASPAR yes 6490505
chr3 149113635 149113649 RORA JASPAR yes 71064937
chr3 149113643 149113655 PKNOX2 JASPAR yes 6490506
chr3 149113643 149113655 PKNOX2 JASPAR yes 71064938
chr3 149113650 149113656 NFIC JASPAR yes 6490507
chr3 149113650 149113656 NFIC JASPAR yes 71064939
chr3 149113662 149113674 IRF1 JASPAR yes 6490508
chr3 149113662 149113674 IRF1 JASPAR yes 71064940
chr3 149113669 149113674 GATA1 TRANSFAC yes 6490509
chr3 149113669 149113674 GATA1 TRANSFAC yes 71064941
chr3 149113695 149113699 LFA1 TRANSFAC yes 6490510
chr3 149113695 149113699 LFA1 TRANSFAC yes 71064942
chr3 149113701 149113721 RREB1 JASPAR yes 6490511
chr3 149113701 149113721 RREB1 JASPAR yes 71064943
chr3 149113703 149113724 ZNF263 JASPAR yes 6490512
chr3 149113703 149113724 ZNF263 JASPAR yes 71064944
chr3 149113704 149113710 ZNF354C JASPAR yes 6490513
chr3 149113704 149113710 ZNF354C JASPAR yes 71064945
chr3 149113704 149113724 RREB1 JASPAR yes 6490514
chr3 149113704 149113724 RREB1 JASPAR yes 71064946
chr3 149113705 149113725 RREB1 JASPAR yes 6490515
chr3 149113705 149113725 RREB1 JASPAR yes 71064947
chr3 149113712 149113717 SP1 TRANSFAC yes 6490516
chr3 149113712 149113717 SP1 TRANSFAC yes 71064948
chr3 149113713 149113723 ZNF740 JASPAR yes 6490517
chr3 149113713 149113723 ZNF740 JASPAR yes 71064949
chr3 149113715 149113736 ZNF263 JASPAR yes 6490518
chr3 149113715 149113736 ZNF263 JASPAR yes 71064950
chr3 149113718 149113723 SP1 TRANSFAC yes 6490519
chr3 149113718 149113723 SP1 TRANSFAC yes 71064951
chr3 149113739 149113744 GATA2 JASPAR yes 6490520
chr3 149113739 149113744 GATA2 JASPAR yes 71064952
chr3 149113745 149113755 ERF JASPAR yes 6490521
chr3 149113745 149113755 ERG JASPAR yes 6490522
chr3 149113745 149113755 ETS1 JASPAR yes 6490523
chr3 149113745 149113755 FLI1 JASPAR yes 6490524
chr3 149113745 149113755 ERF JASPAR yes 71064953
chr3 149113745 149113755 ERG JASPAR yes 71064954
chr3 149113745 149113755 ETS1 JASPAR yes 71064955
chr3 149113745 149113755 FLI1 JASPAR yes 71064956
chr3 149113745 149113756 ETV2 JASPAR yes 6490525
chr3 149113745 149113756 ETV2 JASPAR yes 71064957
chr3 149113746 149113754 FEV JASPAR yes 6490526
chr3 149113746 149113754 FEV JASPAR yes 71064958
chr3 149113771 149113785 RORA JASPAR yes 6490527
chr3 149113771 149113785 RORA JASPAR yes 71064959
chr3 149113773 149113776 MYB TRANSFAC yes 6490528
chr3 149113773 149113776 MYB TRANSFAC yes 71064960
chr3 149113774 149113784 RORA JASPAR yes 6490529
chr3 149113774 149113784 RORA JASPAR yes 71064961
chr3 149113775 149113786 ESRRA JASPAR yes 6490530
chr3 149113775 149113786 ESRRB JASPAR yes 6490531
chr3 149113775 149113786 ESRRA JASPAR yes 71064962
chr3 149113775 149113786 ESRRB JASPAR yes 71064963
chr3 149113777 149113785 NR4A2 JASPAR yes 6490532
chr3 149113777 149113785 NR4A2 JASPAR yes 71064964
chr3 149113779 149113783 ESR1 TRANSFAC yes 6490533
chr3 149113779 149113783 ESR1 TRANSFAC yes 71064965
chr3 149113794 149113799 ETS2 TRANSFAC yes 6490534
chr3 149113794 149113799 ETS2 TRANSFAC yes 71064966
chr3 149113800 149113803 MYB TRANSFAC yes 6490535
chr3 149113800 149113803 MYB TRANSFAC yes 71064967
chr3 149113804 149113814 REL JASPAR yes 6490536
chr3 149113804 149113814 REL JASPAR yes 71064968
chr3 149113804 149113815 NFKB1 JASPAR yes 6490537
chr3 149113804 149113815 NFKB1 JASPAR yes 71064969
chr3 149113807 149113811 YY1 TRANSFAC yes 6490538
chr3 149113807 149113811 YY1 TRANSFAC yes 71064970
chr3 149113813 149113827 STAT1 JASPAR yes 6490539
chr3 149113813 149113827 STAT1 JASPAR yes 71064971
chr3 149113820 149113837 PAX1 JASPAR yes 6490540
chr3 149113820 149113837 PAX9 JASPAR yes 6490541
chr3 149113820 149113837 PAX1 JASPAR yes 71064972
chr3 149113820 149113837 PAX9 JASPAR yes 71064973
chr3 149113830 149113841 TBX20 JASPAR yes 6490542
chr3 149113830 149113841 TBX2 JASPAR yes 6490543
chr3 149113830 149113841 TBX20 JASPAR yes 71064974
chr3 149113830 149113841 TBX2 JASPAR yes 71064975
chr3 149113832 149113840 TBX15 JASPAR yes 6490544
chr3 149113832 149113840 TBX1 JASPAR yes 6490545
chr3 149113832 149113840 TBX4 JASPAR yes 6490546
chr3 149113832 149113840 TBX5 JASPAR yes 6490547
chr3 149113832 149113840 TBX15 JASPAR yes 71064976
chr3 149113832 149113840 TBX1 JASPAR yes 71064977
chr3 149113832 149113840 TBX4 JASPAR yes 71064978
chr3 149113832 149113840 TBX5 JASPAR yes 71064979
chr3 149113868 149113874 SOX10 JASPAR yes 6490548
chr3 149113868 149113874 SOX10 JASPAR yes 71064980
chr3 149113875 149113891 ZNF143 JASPAR yes 6490549
chr3 149113875 149113891 ZNF143 JASPAR yes 71064981
chr3 149113877 149113881 LFA1 TRANSFAC yes 6490550
chr3 149113877 149113881 LFA1 TRANSFAC yes 71064982
chr3 149113921 149113925 H1TF2 TRANSFAC yes 6490551
chr3 149113921 149113925 NFE TRANSFAC yes 6490552
chr3 149113921 149113925 SRF TRANSFAC yes 6490553
chr3 149113921 149113925 H1TF2 TRANSFAC yes 71064983
chr3 149113921 149113925 NFE TRANSFAC yes 71064984
chr3 149113921 149113925 SRF TRANSFAC yes 71064985
chr3 149113928 149113933 ETS2 TRANSFAC yes 6490554
chr3 149113928 149113933 ETS2 TRANSFAC yes 71064986
chr3 149113935 149113939 YY1 TRANSFAC yes 6490555
chr3 149113935 149113939 YY1 TRANSFAC yes 71064987
chr3 149113941 149113956 TFAP2C JASPAR yes 6490556
chr3 149113941 149113956 TFAP2C JASPAR yes 71064988
chr3 149113960 149113965 TFAP2A TRANSFAC yes 6490557
chr3 149113960 149113965 TFAP2A TRANSFAC yes 71064989
chr3 149113960 149113966 MZF1 JASPAR yes 6490558
chr3 149113960 149113966 MZF1 JASPAR yes 71064990
chr3 149113961 149113975 MTF1 JASPAR yes 6490559
chr3 149113961 149113975 MTF1 JASPAR yes 71064991
chr3 149113988 149114003 HSF1 JASPAR yes 6490560
chr3 149113988 149114003 HSF1 JASPAR yes 71064992
chr3 149113989 149114002 HSF2 JASPAR yes 6490561
chr3 149113989 149114002 HSF2 JASPAR yes 71064993
SNP sites on vista42729[chr3:149113631-149114007]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149113636 rs74526806 G T
RORA
7101120
chr3 149113709 rs71619311 ATGTGGTGGGGG A
RREB1 ZNF263 ZNF354C
7101121
chr3 149113709 rs71918132 ATGTGGTGGGGG A
RREB1 ZNF263 ZNF354C
7101122
chr3 149113806 rs72615620 G A
NFKB1 REL
7101123
chr3 149113807 rs62275076 G A
NFKB1 REL YY1
7101124
chr3 149113840 rs76256350 T A
TBX1 TBX15 TBX2 TBX20 TBX4 TBX5
7101125
chr3 149113868 rs114790833 C G
SOX10
7101126
chr3 149114003 rs559947625 T C
HSF1
7101127
Genes possibly regulated by vista42729[chr3:149113631-149114007]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149036285 149052201 - TM4SF18 ENSG00000163762.2 149052201 0.82 0.96 4173 38570
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 0.82 0.88 4174 82021
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 22246
Expression level of Genes
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miRNAs possibly regulated by vista42729[chr3:149113631-149114007]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results