EnhancerDB
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  3. vista42733[chr3:149180653-149180836]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42733[chr3:149180653-149180836]
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Tissue distribution of vista42733
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Transcription factor that possibly regulate vista42733[chr3:149180653-149180836]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149180657 149180668 TBX20 JASPAR yes 6497984
chr3 149180657 149180668 TBX2 JASPAR yes 6497985
chr3 149180657 149180668 TBX20 JASPAR yes 71065148
chr3 149180657 149180668 TBX2 JASPAR yes 71065149
chr3 149180693 149180697 NFE TRANSFAC yes 6497986
chr3 149180693 149180697 NFE TRANSFAC yes 71065150
chr3 149180693 149180700 MEIS1 JASPAR yes 6497987
chr3 149180693 149180700 MEIS1 JASPAR yes 71065151
chr3 149180695 149180705 GSX2 JASPAR yes 6497988
chr3 149180695 149180705 HESX1 JASPAR yes 6497989
chr3 149180695 149180705 LBX2 JASPAR yes 6497990
chr3 149180695 149180705 MIXL1 JASPAR yes 6497991
chr3 149180695 149180705 MNX1 JASPAR yes 6497992
chr3 149180695 149180705 RAX JASPAR yes 6497993
chr3 149180695 149180705 GSX2 JASPAR yes 71065152
chr3 149180695 149180705 HESX1 JASPAR yes 71065153
chr3 149180695 149180705 LBX2 JASPAR yes 71065154
chr3 149180695 149180705 MIXL1 JASPAR yes 71065155
chr3 149180695 149180705 MNX1 JASPAR yes 71065156
chr3 149180695 149180705 RAX JASPAR yes 71065157
chr3 149180696 149180704 ISX JASPAR yes 6497994
chr3 149180696 149180704 LHX9 JASPAR yes 6497995
chr3 149180696 149180704 LMX1B JASPAR yes 6497996
chr3 149180696 149180704 PRRX1 JASPAR yes 6497997
chr3 149180696 149180704 RAX2 JASPAR yes 6497998
chr3 149180696 149180704 SHOX JASPAR yes 6497999
chr3 149180696 149180704 UNCX JASPAR yes 6498000
chr3 149180696 149180704 ISX JASPAR yes 71065158
chr3 149180696 149180704 LHX9 JASPAR yes 71065159
chr3 149180696 149180704 LMX1B JASPAR yes 71065160
chr3 149180696 149180704 PRRX1 JASPAR yes 71065161
chr3 149180696 149180704 RAX2 JASPAR yes 71065162
chr3 149180696 149180704 SHOX JASPAR yes 71065163
chr3 149180696 149180704 UNCX JASPAR yes 71065164
chr3 149180712 149180726 SPI1 JASPAR yes 6498001
chr3 149180712 149180726 SPI1 JASPAR yes 71065165
chr3 149180718 149180725 SPI1 JASPAR yes 6498002
chr3 149180718 149180725 SPI1 JASPAR yes 71065166
chr3 149180746 149180757 NFIL3 JASPAR yes 6498003
chr3 149180746 149180757 NFIL3 JASPAR yes 71065167
chr3 149180748 149180758 CEBPD JASPAR yes 6498004
chr3 149180748 149180758 CEBPD JASPAR yes 71065168
chr3 149180748 149180759 CEBPA JASPAR yes 6498005
chr3 149180748 149180759 CEBPA JASPAR yes 71065169
chr3 149180776 149180791 RUNX2 JASPAR yes 6498006
chr3 149180776 149180791 RUNX2 JASPAR yes 71065170
chr3 149180777 149180786 RUNX2 JASPAR yes 6498007
chr3 149180777 149180786 RUNX2 JASPAR yes 71065171
chr3 149180777 149180787 RUNX3 JASPAR yes 6498008
chr3 149180777 149180787 RUNX3 JASPAR yes 71065172
chr3 149180777 149180788 RUNX1 JASPAR yes 6498009
chr3 149180777 149180788 RUNX1 JASPAR yes 71065173
chr3 149180786 149180796 NFATC3 JASPAR yes 6498010
chr3 149180786 149180796 NFATC3 JASPAR yes 71065174
chr3 149180788 149180795 NFATC2 JASPAR yes 6498011
chr3 149180788 149180795 NFATC2 JASPAR yes 71065175
chr3 149180790 149180804 FOXF2 JASPAR yes 6498012
chr3 149180790 149180804 ONECUT2 JASPAR yes 6498013
chr3 149180790 149180804 ONECUT3 JASPAR yes 6498014
chr3 149180790 149180804 FOXF2 JASPAR yes 71065176
chr3 149180790 149180804 ONECUT2 JASPAR yes 71065177
chr3 149180790 149180804 ONECUT3 JASPAR yes 71065178
chr3 149180790 149180805 FOXP1 JASPAR yes 6498015
chr3 149180790 149180805 FOXP1 JASPAR yes 71065179
chr3 149180791 149180806 FOXA1 JASPAR yes 6498016
chr3 149180791 149180806 FOXA1 JASPAR yes 71065180
chr3 149180792 149180803 FOXB1 JASPAR yes 6498017
chr3 149180792 149180803 FOXC1 JASPAR yes 6498018
chr3 149180792 149180803 FOXB1 JASPAR yes 71065181
chr3 149180792 149180803 FOXC1 JASPAR yes 71065182
chr3 149180792 149180804 FOXC2 JASPAR yes 6498019
chr3 149180792 149180804 FOXC2 JASPAR yes 71065183
chr3 149180793 149180805 FOXI1 JASPAR yes 6498020
chr3 149180793 149180805 FOXI1 JASPAR yes 71065184
chr3 149180794 149180808 ONECUT3 JASPAR yes 6498021
chr3 149180794 149180808 ONECUT3 JASPAR yes 71065185
chr3 149180794 149180809 FOXP1 JASPAR yes 6498022
chr3 149180794 149180809 FOXP1 JASPAR yes 71065186
chr3 149180795 149180810 FOXA1 JASPAR yes 6498023
chr3 149180795 149180810 FOXA1 JASPAR yes 71065187
chr3 149180796 149180807 FOXB1 JASPAR yes 6498024
chr3 149180796 149180807 FOXC1 JASPAR yes 6498025
chr3 149180796 149180807 FOXB1 JASPAR yes 71065188
chr3 149180796 149180807 FOXC1 JASPAR yes 71065189
chr3 149180796 149180808 FOXC2 JASPAR yes 6498026
chr3 149180796 149180808 FOXC2 JASPAR yes 71065190
chr3 149180797 149180809 FOXI1 JASPAR yes 6498027
chr3 149180797 149180809 FOXI1 JASPAR yes 71065191
chr3 149180802 149180810 FOXL1 JASPAR yes 6498028
chr3 149180802 149180810 FOXL1 JASPAR yes 71065192
chr3 149180813 149180828 RUNX2 JASPAR yes 6498029
chr3 149180813 149180828 RUNX2 JASPAR yes 71065193
chr3 149180819 149180825 SOX10 JASPAR yes 6498030
chr3 149180819 149180825 SOX10 JASPAR yes 71065194
chr3 149180827 149180841 NR2F1 JASPAR yes 6498031
chr3 149180827 149180841 NR2F1 JASPAR yes 71065195
chr3 149180836 149180840 H4TF2 TRANSFAC yes 6498032
chr3 149180836 149180840 H4TF2 TRANSFAC yes 71065196
SNP sites on vista42733[chr3:149180653-149180836]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149180778 rs62272015 A G
RUNX1 RUNX2 RUNX3
7101789
chr3 149180822 rs143877980 AAAG A
RUNX2 SOX10
7101790
chr3 149180822 rs373661623 AAAG A
RUNX2 SOX10
7101791
Genes possibly regulated by vista42733[chr3:149180653-149180836]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 0.82 0.88 4174 14999
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 89075
Expression level of Genes
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miRNAs possibly regulated by vista42733[chr3:149180653-149180836]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results