EnhancerDB
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  3. vista42736[chr3:149225388-149225682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42736[chr3:149225388-149225682]
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Tissue distribution of vista42736
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Transcription factor that possibly regulate vista42736[chr3:149225388-149225682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149225394 149225408 ZIC1 JASPAR yes 6500428
chr3 149225394 149225408 ZIC1 JASPAR yes 71065297
chr3 149225394 149225409 ZIC3 JASPAR yes 6500429
chr3 149225394 149225409 ZIC4 JASPAR yes 6500430
chr3 149225394 149225409 ZIC3 JASPAR yes 71065298
chr3 149225394 149225409 ZIC4 JASPAR yes 71065299
chr3 149225413 149225416 MYB TRANSFAC yes 6500431
chr3 149225413 149225416 MYB TRANSFAC yes 71065300
chr3 149225414 149225425 ETV2 JASPAR yes 6500432
chr3 149225414 149225425 ETV2 JASPAR yes 71065301
chr3 149225415 149225425 ETS1 JASPAR yes 6500433
chr3 149225415 149225425 ETS1 JASPAR yes 71065302
chr3 149225420 149225426 HiNF-A TRANSFAC yes 6500434
chr3 149225420 149225426 HiNF-A TRANSFAC yes 71065303
chr3 149225424 149225435 FLI1 JASPAR yes 6500435
chr3 149225424 149225435 FLI1 JASPAR yes 71065304
chr3 149225439 149225444 TFAP2A TRANSFAC yes 6500436
chr3 149225439 149225444 TFAP2A TRANSFAC yes 71065305
chr3 149225439 149225445 MZF1 JASPAR yes 6500437
chr3 149225439 149225445 MZF1 JASPAR yes 71065306
chr3 149225452 149225467 FOXP1 JASPAR yes 6500438
chr3 149225452 149225467 FOXP1 JASPAR yes 71065307
chr3 149225455 149225463 FOXO3 JASPAR yes 6500439
chr3 149225455 149225463 FOXO3 JASPAR yes 71065308
chr3 149225469 149225473 YY1 TRANSFAC yes 6500440
chr3 149225469 149225473 YY1 TRANSFAC yes 71065309
chr3 149225510 149225524 IRF7 JASPAR yes 6500441
chr3 149225510 149225524 IRF7 JASPAR yes 71065310
chr3 149225523 149225543 RREB1 JASPAR yes 6500442
chr3 149225523 149225543 RREB1 JASPAR yes 71065311
chr3 149225525 149225545 RREB1 JASPAR yes 6500443
chr3 149225525 149225545 RREB1 JASPAR yes 71065312
chr3 149225531 149225546 RUNX2 JASPAR yes 6500444
chr3 149225531 149225546 RUNX2 JASPAR yes 71065313
chr3 149225535 149225545 RUNX3 JASPAR yes 6500445
chr3 149225535 149225545 RUNX3 JASPAR yes 71065314
chr3 149225536 149225545 RUNX2 JASPAR yes 6500446
chr3 149225536 149225545 RUNX2 JASPAR yes 71065315
chr3 149225546 149225560 RORA JASPAR yes 6500447
chr3 149225546 149225560 RORA JASPAR yes 71065316
chr3 149225549 149225559 RORA JASPAR yes 6500448
chr3 149225549 149225559 RORA JASPAR yes 71065317
chr3 149225554 149225558 ESR1 TRANSFAC yes 6500449
chr3 149225554 149225558 ESR1 TRANSFAC yes 71065318
chr3 149225581 149225587 ETS1 JASPAR yes 6500450
chr3 149225581 149225587 ETS1 JASPAR yes 71065319
chr3 149225635 149225649 RORA JASPAR yes 6500451
chr3 149225635 149225649 RORA JASPAR yes 71065320
chr3 149225638 149225642 YY1 TRANSFAC yes 6500452
chr3 149225638 149225642 YY1 TRANSFAC yes 71065321
chr3 149225638 149225653 JUND JASPAR yes 6500453
chr3 149225638 149225653 JUND JASPAR yes 71065322
chr3 149225643 149225647 ESR1 TRANSFAC yes 6500454
chr3 149225643 149225647 ESR1 TRANSFAC yes 71065323
chr3 149225649 149225661 GRHL1 JASPAR yes 6500455
chr3 149225649 149225661 GRHL1 JASPAR yes 71065324
chr3 149225660 149225672 INSM1 JASPAR yes 6500456
chr3 149225660 149225672 INSM1 JASPAR yes 71065325
SNP sites on vista42736[chr3:149225388-149225682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149225458 rs114589442 T C
FOXO3 FOXP1
7102117
chr3 149225571 rs10935764 C T no 7102118
chr3 149225577 rs116405795 C T no 7102119
chr3 149225581 rs12631134 A G
ETS1
7102120
chr3 149225582 rs13075906 C A
ETS1
7102121
chr3 149225618 rs190540893 C T no 7102122
Genes possibly regulated by vista42736[chr3:149225388-149225682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 66373
Expression level of Genes
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miRNAs possibly regulated by vista42736[chr3:149225388-149225682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results