EnhancerDB
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  3. vista42738[chr3:149229459-149229794]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42738[chr3:149229459-149229794]
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Tissue distribution of vista42738
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Transcription factor that possibly regulate vista42738[chr3:149229459-149229794]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149229438 149229459 ZNF263 JASPAR yes 6501229
chr3 149229438 149229459 ZNF263 JASPAR yes 71065358
chr3 149229453 149229464 NFKB1 JASPAR yes 6501231
chr3 149229453 149229464 NFKB1 JASPAR yes 71065359
chr3 149229454 149229464 NFKB1 JASPAR yes 6501232
chr3 149229454 149229464 NFKB1 JASPAR yes 71065360
chr3 149229459 149229475 ZNF143 JASPAR yes 6501233
chr3 149229459 149229475 ZNF143 JASPAR yes 71065361
chr3 149229472 149229477 MYB TRANSFAC yes 6501234
chr3 149229472 149229477 MYB TRANSFAC yes 71065362
chr3 149229480 149229492 IRF1 JASPAR yes 6501235
chr3 149229480 149229492 IRF1 JASPAR yes 71065363
chr3 149229499 149229507 OTX2 JASPAR yes 6501236
chr3 149229499 149229507 OTX2 JASPAR yes 71065364
chr3 149229523 149229528 SP1 TRANSFAC yes 6501237
chr3 149229523 149229528 SP1 TRANSFAC yes 71065365
chr3 149229537 149229551 IRF7 JASPAR yes 6501238
chr3 149229537 149229551 IRF7 JASPAR yes 71065366
chr3 149229538 149229552 STAT1 JASPAR yes 6501239
chr3 149229538 149229552 STAT1 JASPAR yes 71065367
chr3 149229538 149229553 PRDM1 JASPAR yes 6501240
chr3 149229538 149229553 PRDM1 JASPAR yes 71065368
chr3 149229538 149229556 IRF2 JASPAR yes 6501241
chr3 149229538 149229556 IRF2 JASPAR yes 71065369
chr3 149229554 149229560 YY1 JASPAR yes 6501242
chr3 149229554 149229560 YY1 JASPAR yes 71065370
chr3 149229577 149229588 NFIL3 JASPAR yes 6501243
chr3 149229577 149229588 NFIL3 JASPAR yes 71065371
chr3 149229578 149229590 DBP JASPAR yes 6501244
chr3 149229578 149229590 HLF JASPAR yes 6501245
chr3 149229578 149229590 TEF JASPAR yes 6501246
chr3 149229578 149229590 DBP JASPAR yes 71065372
chr3 149229578 149229590 HLF JASPAR yes 71065373
chr3 149229578 149229590 TEF JASPAR yes 71065374
chr3 149229580 149229591 NFIL3 JASPAR yes 6501247
chr3 149229580 149229591 NFIL3 JASPAR yes 71065375
chr3 149229585 149229588 MYB TRANSFAC yes 6501248
chr3 149229585 149229588 MYB TRANSFAC yes 71065376
chr3 149229588 149229592 YY1 TRANSFAC yes 6501249
chr3 149229588 149229592 YY1 TRANSFAC yes 71065377
chr3 149229593 149229604 HOXC11 JASPAR yes 6501250
chr3 149229593 149229604 HOXD12 JASPAR yes 6501251
chr3 149229593 149229604 HOXC11 JASPAR yes 71065378
chr3 149229593 149229604 HOXD12 JASPAR yes 71065379
chr3 149229594 149229604 HOXC10 JASPAR yes 6501252
chr3 149229594 149229604 HOXD11 JASPAR yes 6501253
chr3 149229594 149229604 HOXC10 JASPAR yes 71065380
chr3 149229594 149229604 HOXD11 JASPAR yes 71065381
chr3 149229594 149229610 POU4F3 JASPAR yes 6501254
chr3 149229594 149229610 POU4F3 JASPAR yes 71065382
chr3 149229626 149229631 ETS2 TRANSFAC yes 6501255
chr3 149229626 149229631 ETS2 TRANSFAC yes 71065383
chr3 149229635 149229647 POU3F1 JASPAR yes 6501256
chr3 149229635 149229647 POU3F1 JASPAR yes 71065384
chr3 149229636 149229644 FOXL1 JASPAR yes 6501257
chr3 149229636 149229644 FOXL1 JASPAR yes 71065385
chr3 149229636 149229647 FOXB1 JASPAR yes 6501258
chr3 149229636 149229647 FOXB1 JASPAR yes 71065386
chr3 149229652 149229656 YY1 TRANSFAC yes 6501259
chr3 149229652 149229656 YY1 TRANSFAC yes 71065387
chr3 149229653 149229668 FOXP1 JASPAR yes 6501260
chr3 149229653 149229668 FOXP1 JASPAR yes 71065388
chr3 149229668 149229684 SOX8 JASPAR yes 6501261
chr3 149229668 149229684 SOX8 JASPAR yes 71065389
chr3 149229669 149229683 POU1F1 JASPAR yes 6501262
chr3 149229669 149229683 POU1F1 JASPAR yes 71065390
chr3 149229670 149229682 POU3F1 JASPAR yes 6501263
chr3 149229670 149229682 POU3F2 JASPAR yes 6501264
chr3 149229670 149229682 POU3F1 JASPAR yes 71065391
chr3 149229670 149229682 POU3F2 JASPAR yes 71065392
chr3 149229670 149229683 POU3F3 JASPAR yes 6501265
chr3 149229670 149229683 POU3F3 JASPAR yes 71065393
chr3 149229671 149229681 NFATC3 JASPAR yes 6501266
chr3 149229671 149229681 NFATC3 JASPAR yes 71065394
chr3 149229671 149229683 POU2F1 JASPAR yes 6501267
chr3 149229671 149229683 POU2F1 JASPAR yes 71065395
chr3 149229672 149229686 IRF7 JASPAR yes 6501268
chr3 149229672 149229686 IRF7 JASPAR yes 71065396
chr3 149229673 149229691 SRF JASPAR yes 6501269
chr3 149229673 149229691 SRF JASPAR yes 71065397
chr3 149229677 149229681 YY1 TRANSFAC yes 6501270
chr3 149229677 149229681 YY1 TRANSFAC yes 71065398
chr3 149229683 149229698 HNF1A JASPAR yes 6501271
chr3 149229683 149229698 HNF1A JASPAR yes 71065399
chr3 149229684 149229698 POU4F1 JASPAR yes 6501272
chr3 149229684 149229698 POU4F1 JASPAR yes 71065400
chr3 149229684 149229700 POU4F3 JASPAR yes 6501273
chr3 149229684 149229700 POU4F3 JASPAR yes 71065401
chr3 149229694 149229698 TEAD2 TRANSFAC yes 6501274
chr3 149229694 149229698 TEAD2 TRANSFAC yes 71065402
chr3 149229696 149229711 FOXA1 JASPAR yes 6501275
chr3 149229696 149229711 FOXA1 JASPAR yes 71065403
chr3 149229703 149229714 FOXH1 JASPAR yes 6501276
chr3 149229703 149229714 FOXH1 JASPAR yes 71065404
chr3 149229720 149229736 POU4F2 JASPAR yes 6501277
chr3 149229720 149229736 POU4F2 JASPAR yes 71065405
chr3 149229722 149229726 YY1 TRANSFAC yes 6501278
chr3 149229722 149229726 YY1 TRANSFAC yes 71065406
chr3 149229729 149229733 YY1 TRANSFAC yes 6501279
chr3 149229729 149229733 YY1 TRANSFAC yes 71065407
chr3 149229738 149229742 TEAD2 TRANSFAC yes 6501280
chr3 149229738 149229742 TEAD2 TRANSFAC yes 71065408
chr3 149229740 149229743 MYB TRANSFAC yes 6501281
chr3 149229740 149229743 MYB TRANSFAC yes 71065409
chr3 149229742 149229752 HOXA13 JASPAR yes 6501282
chr3 149229742 149229752 HOXA13 JASPAR yes 71065410
chr3 149229743 149229747 YY1 TRANSFAC yes 6501283
chr3 149229743 149229747 YY1 TRANSFAC yes 71065411
chr3 149229743 149229758 HNF1A JASPAR yes 6501284
chr3 149229743 149229758 HNF1A JASPAR yes 71065412
chr3 149229746 149229752 TBP TRANSFAC yes 6501285
chr3 149229746 149229752 TBP TRANSFAC yes 71065413
chr3 149229747 149229761 FOXF2 JASPAR yes 6501286
chr3 149229747 149229761 FOXF2 JASPAR yes 71065414
chr3 149229747 149229762 FOXP1 JASPAR yes 6501287
chr3 149229747 149229762 FOXP1 JASPAR yes 71065415
chr3 149229748 149229759 FOXA1 JASPAR yes 6501288
chr3 149229748 149229759 FOXA1 JASPAR yes 71065416
chr3 149229748 149229763 FOXA1 JASPAR yes 6501289
chr3 149229748 149229763 FOXA1 JASPAR yes 71065417
chr3 149229749 149229760 FOXB1 JASPAR yes 6501290
chr3 149229749 149229760 FOXC1 JASPAR yes 6501291
chr3 149229749 149229760 FOXB1 JASPAR yes 71065418
chr3 149229749 149229760 FOXC1 JASPAR yes 71065419
chr3 149229749 149229761 FOXC2 JASPAR yes 6501292
chr3 149229749 149229761 FOXC2 JASPAR yes 71065420
chr3 149229750 149229761 FOXP2 JASPAR yes 6501293
chr3 149229750 149229761 FOXP2 JASPAR yes 71065421
chr3 149229750 149229762 FOXI1 JASPAR yes 6501294
chr3 149229750 149229762 FOXI1 JASPAR yes 71065422
chr3 149229752 149229760 FOXG1 JASPAR yes 6501295
chr3 149229752 149229760 FOXO3 JASPAR yes 6501296
chr3 149229752 149229760 FOXG1 JASPAR yes 71065423
chr3 149229752 149229760 FOXO3 JASPAR yes 71065424
chr3 149229756 149229767 FOXA1 JASPAR yes 6501297
chr3 149229756 149229767 FOXA1 JASPAR yes 71065425
chr3 149229757 149229769 FOXC2 JASPAR yes 6501298
chr3 149229757 149229769 FOXC2 JASPAR yes 71065426
chr3 149229785 149229800 FOXP1 JASPAR yes 6501299
chr3 149229785 149229800 FOXP1 JASPAR yes 71065427
SNP sites on vista42738[chr3:149229459-149229794]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149229516 rs143958892 T C no 7102177
chr3 149229522 rs138557349 T A,C no 7102178
chr3 149229650 rs182458732 A T no 7102179
chr3 149229718 rs115966829 A G no 7102180
chr3 149229761 rs373934854 G A
FOXA1 FOXC2 FOXF2 FOXI1 FOXP1 FOXP2
7102181
Genes possibly regulated by vista42738[chr3:149229459-149229794]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149191761 149221068 + TM4SF4 ENSG00000169903.6 149191761 0.99 1.0 4175 62302
Expression level of Genes
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miRNAs possibly regulated by vista42738[chr3:149229459-149229794]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results