EnhancerDB
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  3. vista42748[chr3:149499134-149499345]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42748[chr3:149499134-149499345]
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Tissue distribution of vista42748
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Transcription factor that possibly regulate vista42748[chr3:149499134-149499345]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 149499134 149499139 TFAP2A TRANSFAC yes 71065813
chr3 149499134 149499140 MZF1 JASPAR yes 71065814
chr3 149499137 149499143 PEA3 TRANSFAC yes 71065815
chr3 149499152 149499173 IRF1 JASPAR yes 71065816
chr3 149499155 149499159 YY1 TRANSFAC yes 71065817
chr3 149499168 149499184 POU4F2 JASPAR yes 71065818
chr3 149499168 149499184 POU4F3 JASPAR yes 71065819
chr3 149499169 149499190 IRF1 JASPAR yes 71065820
chr3 149499170 149499184 POU4F1 JASPAR yes 71065821
chr3 149499171 149499186 IRF9 JASPAR yes 71065822
chr3 149499172 149499186 IRF7 JASPAR yes 71065823
chr3 149499172 149499186 IRF8 JASPAR yes 71065824
chr3 149499173 149499187 STAT1 JASPAR yes 71065825
chr3 149499173 149499188 PRDM1 JASPAR yes 71065826
chr3 149499173 149499188 STAT2 JASPAR yes 71065827
chr3 149499173 149499191 IRF2 JASPAR yes 71065828
chr3 149499174 149499186 IRF1 JASPAR yes 71065829
chr3 149499190 149499201 FLI1 JASPAR yes 71065830
chr3 149499190 149499203 ELF3 JASPAR yes 71065831
chr3 149499191 149499201 ETV6 JASPAR yes 71065832
chr3 149499191 149499202 ELF5 JASPAR yes 71065833
chr3 149499191 149499202 ETV2 JASPAR yes 71065834
chr3 149499191 149499203 EHF JASPAR yes 71065835
chr3 149499191 149499203 ELF1 JASPAR yes 71065836
chr3 149499191 149499203 ELF4 JASPAR yes 71065837
chr3 149499191 149499204 ELF1 JASPAR yes 71065838
chr3 149499191 149499205 SPI1 JASPAR yes 71065839
chr3 149499191 149499205 SPIC JASPAR yes 71065840
chr3 149499192 149499199 SPI1 JASPAR yes 71065841
chr3 149499192 149499200 EHF JASPAR yes 71065842
chr3 149499194 149499201 SPIB JASPAR yes 71065843
chr3 149499214 149499229 SOX21 JASPAR yes 71065844
chr3 149499222 149499226 YY1 TRANSFAC yes 71065845
chr3 149499250 149499256 NFIC JASPAR yes 71065846
chr3 149499251 149499263 PKNOX1 JASPAR yes 71065847
chr3 149499251 149499263 PKNOX2 JASPAR yes 71065848
chr3 149499251 149499263 TGIF1 JASPAR yes 71065849
chr3 149499251 149499263 TGIF2 JASPAR yes 71065850
chr3 149499252 149499262 NEUROG2 JASPAR yes 71065851
chr3 149499279 149499287 TEAD3 JASPAR yes 71065852
chr3 149499280 149499290 RELA JASPAR yes 71065853
chr3 149499280 149499290 REL JASPAR yes 71065854
chr3 149499316 149499321 GATA1 TRANSFAC yes 71065855
SNP sites on vista42748[chr3:149499134-149499345]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 149499186 rs557219548 T C
IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 STAT1 STAT2
7104431
chr3 149499194 rs534828332 C T
EHF ELF1 ELF3 ELF4 ELF5 ETV2 ETV6 FLI1 SPI1 SPIB SPIC
7104432
Genes possibly regulated by vista42748[chr3:149499134-149499345]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 149235022 149454501 - WWTR1 ENSG00000018408.10 149454501 0.8 0.99 4176 55367
chr3 149456257 149470286 - COMMD2 ENSG00000114744.4 149470286 0.69 0.99 4177 71152
chr3 149530495 149679926 + RNF13 ENSG00000082996.15 149530495 0.73 0.99 4179 68850
Expression level of Genes
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miRNAs possibly regulated by vista42748[chr3:149499134-149499345]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results