EnhancerDB
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  3. vista4276[chr1:185704575-185705000]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4276[chr1:185704575-185705000]
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Tissue distribution of vista4276
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Transcription factor that possibly regulate vista4276[chr1:185704575-185705000]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 185704594 185704597 MYB TRANSFAC yes 118417909
chr1 185704601 185704605 YY1 TRANSFAC yes 118417910
chr1 185704612 185704630 NR3C1 JASPAR yes 118417911
chr1 185704615 185704630 SCRT1 JASPAR yes 118417912
chr1 185704616 185704626 MSC JASPAR yes 118417913
chr1 185704616 185704628 GRHL1 JASPAR yes 118417914
chr1 185704617 185704630 SCRT2 JASPAR yes 118417915
chr1 185704619 185704625 PTF TRANSFAC yes 118417916
chr1 185704624 185704637 SMAD2 JASPAR yes 118417917
chr1 185704637 185704642 ETS2 TRANSFAC yes 118417918
chr1 185704655 185704658 MYB TRANSFAC yes 118417919
chr1 185704674 185704688 TCF7L2 JASPAR yes 118417920
chr1 185704674 185704689 LEF1 JASPAR yes 118417921
chr1 185704675 185704690 FOXP1 JASPAR yes 118417922
chr1 185704675 185704696 IRF1 JASPAR yes 118417923
chr1 185704680 185704695 FOXP1 JASPAR yes 118417924
chr1 185704683 185704704 IRF1 JASPAR yes 118417925
chr1 185704691 185704706 NFYB JASPAR yes 118417926
chr1 185704694 185704705 DUX4 JASPAR yes 118417927
chr1 185704695 185704707 PBX1 JASPAR yes 118417928
chr1 185704698 185704702 H1TF2 TRANSFAC yes 118417929
chr1 185704698 185704702 NFE TRANSFAC yes 118417930
chr1 185704698 185704702 SRF TRANSFAC yes 118417931
chr1 185704703 185704707 YY1 TRANSFAC yes 118417932
chr1 185704709 185704722 DUXA JASPAR yes 118417933
chr1 185704710 185704713 MYB TRANSFAC yes 118417934
chr1 185704710 185704721 DUX4 JASPAR yes 118417935
chr1 185704737 185704741 LFA1 TRANSFAC yes 118417936
chr1 185704743 185704747 YY1 TRANSFAC yes 118417937
chr1 185704747 185704753 GATA3 JASPAR yes 118417938
chr1 185704766 185704770 TEAD2 TRANSFAC yes 118417939
chr1 185704766 185704771 TBP TRANSFAC yes 118417940
chr1 185704767 185704775 FOXG1 JASPAR yes 118417941
chr1 185704772 185704776 YY1 TRANSFAC yes 118417942
chr1 185704812 185704820 TEAD3 JASPAR yes 118417943
chr1 185704850 185704853 MYB TRANSFAC yes 118417944
chr1 185704856 185704860 YY1 TRANSFAC yes 118417945
chr1 185704862 185704877 TFAP2A JASPAR yes 118417946
chr1 185704862 185704877 TFAP2C JASPAR yes 118417947
chr1 185704903 185704918 FOXA1 JASPAR yes 118417948
chr1 185704904 185704919 FOXP1 JASPAR yes 118417949
chr1 185704906 185704917 FOXB1 JASPAR yes 118417950
chr1 185704906 185704917 FOXC1 JASPAR yes 118417951
chr1 185704907 185704911 YY1 TRANSFAC yes 118417952
chr1 185704907 185704918 FOXA1 JASPAR yes 118417953
chr1 185704911 185704932 IRF1 JASPAR yes 118417954
chr1 185704914 185704928 STAT1 JASPAR yes 118417955
chr1 185704915 185704927 IRF1 JASPAR yes 118417956
chr1 185704915 185704929 IRF7 JASPAR yes 118417957
chr1 185704915 185704929 IRF8 JASPAR yes 118417958
chr1 185704915 185704930 IRF9 JASPAR yes 118417959
chr1 185704917 185704938 IRF1 JASPAR yes 118417960
chr1 185704919 185704934 PRDM1 JASPAR yes 118417961
chr1 185704919 185704934 STAT2 JASPAR yes 118417962
chr1 185704921 185704935 IRF8 JASPAR yes 118417963
chr1 185704921 185704936 IRF9 JASPAR yes 118417964
chr1 185704934 185704954 TBX19 JASPAR yes 118417965
chr1 185704936 185704952 T JASPAR yes 118417966
SNP sites on vista4276[chr1:185704575-185705000]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 185704641 rs576099821 G A
ETS2
795891
chr1 185704680 rs568381722 TGAAAA T
FOXP1 IRF1 LEF1 TCF7L2
795892
chr1 185704866 rs141189403 C A
TFAP2A TFAP2C
795893
chr1 185704872 rs528866313 G T
TFAP2A TFAP2C
795894
Genes possibly regulated by vista4276[chr1:185704575-185705000]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 185703683 186160085 + HMCN1 ENSG00000143341.7 185703683 0.94 0.93 1654 99108
Expression level of Genes
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miRNAs possibly regulated by vista4276[chr1:185704575-185705000]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results