EnhancerDB
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  3. vista42788[chr3:150478267-150478712]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42788[chr3:150478267-150478712]
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Tissue distribution of vista42788
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Transcription factor that possibly regulate vista42788[chr3:150478267-150478712]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 150478366 150478789 RELA UCSC Txn Factor no Conserved 108530717
chr3 150478484 150478722 RUNX3 UCSC Txn Factor no Conserved 108530718
chr3 150478284 150478296 BHLHE23 JASPAR yes 6592421
chr3 150478284 150478296 BHLHE23 JASPAR yes 71067735
chr3 150478285 150478295 BHLHE22 JASPAR yes 6592422
chr3 150478285 150478295 OLIG1 JASPAR yes 6592423
chr3 150478285 150478295 BHLHE22 JASPAR yes 71067736
chr3 150478285 150478295 OLIG1 JASPAR yes 71067737
chr3 150478291 150478307 RFX3 JASPAR yes 6592424
chr3 150478291 150478307 RFX3 JASPAR yes 71067738
chr3 150478294 150478309 RFX5 JASPAR yes 6592425
chr3 150478294 150478309 RFX5 JASPAR yes 71067739
chr3 150478300 150478315 HNF4G JASPAR yes 6592426
chr3 150478300 150478315 HNF4G JASPAR yes 71067740
chr3 150478317 150478338 IRF1 JASPAR yes 6592427
chr3 150478317 150478338 IRF1 JASPAR yes 71067741
chr3 150478319 150478334 IRF9 JASPAR yes 6592428
chr3 150478319 150478334 IRF9 JASPAR yes 71067742
chr3 150478320 150478334 IRF7 JASPAR yes 6592429
chr3 150478320 150478334 IRF8 JASPAR yes 6592430
chr3 150478320 150478334 IRF7 JASPAR yes 71067743
chr3 150478320 150478334 IRF8 JASPAR yes 71067744
chr3 150478321 150478335 STAT1 JASPAR yes 6592431
chr3 150478321 150478335 STAT1 JASPAR yes 71067745
chr3 150478321 150478336 PRDM1 JASPAR yes 6592432
chr3 150478321 150478336 STAT2 JASPAR yes 6592433
chr3 150478321 150478336 PRDM1 JASPAR yes 71067746
chr3 150478321 150478336 STAT2 JASPAR yes 71067747
chr3 150478321 150478339 IRF2 JASPAR yes 6592434
chr3 150478321 150478339 IRF2 JASPAR yes 71067748
chr3 150478322 150478334 IRF1 JASPAR yes 6592435
chr3 150478322 150478334 IRF1 JASPAR yes 71067749
chr3 150478351 150478354 MYB TRANSFAC yes 6592436
chr3 150478351 150478354 MYB TRANSFAC yes 71067750
chr3 150478358 150478363 ETS2 TRANSFAC yes 6592437
chr3 150478358 150478363 ETS2 TRANSFAC yes 71067751
chr3 150478363 150478378 PRDM1 JASPAR yes 6592438
chr3 150478363 150478378 PRDM1 JASPAR yes 71067752
chr3 150478367 150478381 EBF1 JASPAR yes 6592439
chr3 150478367 150478381 EBF1 JASPAR yes 71067753
chr3 150478368 150478379 EBF1 JASPAR yes 6592440
chr3 150478368 150478379 EBF1 JASPAR yes 71067754
chr3 150478369 150478380 EBF1 JASPAR yes 6592441
chr3 150478369 150478380 EBF1 JASPAR yes 71067755
chr3 150478369 150478384 RFX5 JASPAR yes 6592442
chr3 150478369 150478384 RFX5 JASPAR yes 71067756
chr3 150478378 150478393 SOX21 JASPAR yes 6592443
chr3 150478378 150478393 SOX21 JASPAR yes 71067757
chr3 150478391 150478402 RUNX1 JASPAR yes 6592444
chr3 150478391 150478402 RUNX1 JASPAR yes 71067758
chr3 150478395 150478406 DMRT3 JASPAR yes 6592445
chr3 150478395 150478406 DMRT3 JASPAR yes 71067759
chr3 150478398 150478410 HNF1B JASPAR yes 6592446
chr3 150478398 150478410 HNF1B JASPAR yes 71067760
chr3 150478402 150478406 YY1 TRANSFAC yes 6592447
chr3 150478402 150478406 YY1 TRANSFAC yes 71067761
chr3 150478403 150478418 FOXP1 JASPAR yes 6592448
chr3 150478403 150478418 MEF2C JASPAR yes 6592449
chr3 150478403 150478418 FOXP1 JASPAR yes 71067762
chr3 150478403 150478418 MEF2C JASPAR yes 71067763
chr3 150478409 150478420 PROP1 JASPAR yes 6592450
chr3 150478409 150478420 PROP1 JASPAR yes 71067764
chr3 150478416 150478430 ONECUT2 JASPAR yes 6592451
chr3 150478416 150478430 ONECUT2 JASPAR yes 71067765
chr3 150478426 150478437 JUND JASPAR yes 6592452
chr3 150478426 150478437 JUND JASPAR yes 71067766
chr3 150478428 150478439 BATF JASPAR yes 6592453
chr3 150478428 150478439 BATF JASPAR yes 71067767
chr3 150478446 150478450 YY1 TRANSFAC yes 6592454
chr3 150478446 150478450 YY1 TRANSFAC yes 71067768
chr3 150478451 150478466 STAT2 JASPAR yes 6592455
chr3 150478451 150478466 STAT2 JASPAR yes 71067769
chr3 150478475 150478479 YY1 TRANSFAC yes 6592456
chr3 150478475 150478479 YY1 TRANSFAC yes 71067770
chr3 150478481 150478487 TCF4 TRANSFAC yes 6592457
chr3 150478481 150478487 TCF4 TRANSFAC yes 71067771
chr3 150478489 150478500 NRF1 JASPAR yes 6592458
chr3 150478489 150478500 NRF1 JASPAR yes 71067772
chr3 150478500 150478511 STAT1 JASPAR yes 6592459
chr3 150478500 150478511 STAT1 JASPAR yes 71067773
chr3 150478500 150478515 PRDM1 JASPAR yes 6592460
chr3 150478500 150478515 PRDM1 JASPAR yes 71067774
chr3 150478523 150478535 YY1 JASPAR yes 6592461
chr3 150478523 150478535 YY1 JASPAR yes 71067775
chr3 150478532 150478538 MZF1 JASPAR yes 6592462
chr3 150478532 150478538 MZF1 JASPAR yes 71067776
chr3 150478547 150478560 NFKB1 JASPAR yes 6592463
chr3 150478547 150478560 NFKB2 JASPAR yes 6592464
chr3 150478547 150478560 NFKB1 JASPAR yes 71067777
chr3 150478547 150478560 NFKB2 JASPAR yes 71067778
chr3 150478548 150478558 NFKB1 JASPAR yes 6592465
chr3 150478548 150478558 RELA JASPAR yes 6592466
chr3 150478548 150478558 NFKB1 JASPAR yes 71067779
chr3 150478548 150478558 RELA JASPAR yes 71067780
chr3 150478548 150478559 NFKB1 JASPAR yes 6592467
chr3 150478548 150478559 NFKB1 JASPAR yes 71067781
chr3 150478548 150478561 NFKB1 JASPAR yes 6592468
chr3 150478548 150478561 NFKB1 JASPAR yes 71067782
chr3 150478549 150478553 LFA1 TRANSFAC yes 6592469
chr3 150478549 150478553 LFA1 TRANSFAC yes 71067783
chr3 150478549 150478559 NFKB1 JASPAR yes 6592470
chr3 150478549 150478559 NFKB1 JASPAR yes 71067784
chr3 150478600 150478610 HMBOX1 JASPAR yes 6592471
chr3 150478600 150478610 HMBOX1 JASPAR yes 71067785
chr3 150478602 150478605 MYB TRANSFAC yes 6592472
chr3 150478602 150478605 MYB TRANSFAC yes 71067786
chr3 150478604 150478616 ZBTB7B JASPAR yes 6592473
chr3 150478604 150478616 ZBTB7C JASPAR yes 6592474
chr3 150478604 150478616 ZBTB7B JASPAR yes 71067787
chr3 150478604 150478616 ZBTB7C JASPAR yes 71067788
chr3 150478618 150478625 NFATC2 JASPAR yes 6592475
chr3 150478618 150478625 NFATC2 JASPAR yes 71067789
chr3 150478662 150478674 POU2F1 JASPAR yes 6592476
chr3 150478662 150478674 POU2F1 JASPAR yes 71067790
chr3 150478662 150478675 POU3F3 JASPAR yes 6592477
chr3 150478662 150478675 POU3F3 JASPAR yes 71067791
chr3 150478662 150478676 POU1F1 JASPAR yes 6592478
chr3 150478662 150478676 POU1F1 JASPAR yes 71067792
chr3 150478663 150478674 FOXA1 JASPAR yes 6592479
chr3 150478663 150478674 FOXA1 JASPAR yes 71067793
chr3 150478663 150478675 POU3F1 JASPAR yes 6592480
chr3 150478663 150478675 POU3F2 JASPAR yes 6592481
chr3 150478663 150478675 POU3F1 JASPAR yes 71067794
chr3 150478663 150478675 POU3F2 JASPAR yes 71067795
chr3 150478663 150478676 POU2F2 JASPAR yes 6592482
chr3 150478663 150478676 POU2F2 JASPAR yes 71067796
chr3 150478663 150478678 FOXA1 JASPAR yes 6592483
chr3 150478663 150478678 FOXA1 JASPAR yes 71067797
chr3 150478664 150478672 POU2F1 TRANSFAC yes 6592484
chr3 150478664 150478672 POU2F1 TRANSFAC yes 71067798
chr3 150478664 150478673 POU3F4 JASPAR yes 6592485
chr3 150478664 150478673 POU5F1B JASPAR yes 6592486
chr3 150478664 150478673 POU3F4 JASPAR yes 71067799
chr3 150478664 150478673 POU5F1B JASPAR yes 71067800
chr3 150478665 150478672 POU2F1 TRANSFAC yes 6592487
chr3 150478665 150478672 POU2F2 TRANSFAC yes 6592488
chr3 150478665 150478672 POU2F1 TRANSFAC yes 71067801
chr3 150478665 150478672 POU2F2 TRANSFAC yes 71067802
chr3 150478674 150478682 GATA3 JASPAR yes 6592489
chr3 150478674 150478682 GATA3 JASPAR yes 71067803
chr3 150478675 150478688 POU3F3 JASPAR yes 6592490
chr3 150478675 150478688 POU3F3 JASPAR yes 71067804
chr3 150478707 150478725 MAFF JASPAR yes 6592491
chr3 150478707 150478725 MAFF JASPAR yes 71067805
chr3 150478708 150478723 MAFK JASPAR yes 6592492
chr3 150478708 150478723 MAFK JASPAR yes 71067806
chr3 150478712 150478723 NRL JASPAR yes 6592493
chr3 150478712 150478723 NRL JASPAR yes 71067807
SNP sites on vista42788[chr3:150478267-150478712]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 150478492 rs567101781 C T
NRF1 RELA RUNX3
7110030
chr3 150478574 rs552386983 A C
RELA RUNX3
7110031
chr3 150478690 rs147867347 G C
RELA RUNX3
7110032
Genes possibly regulated by vista42788[chr3:150478267-150478712]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 150377672 150421758 - FAM194A ENSG00000163645.10 150421758 0.92 0.99 4186 43491
chr3 150458914 150481264 - SIAH2 ENSG00000181788.3 150481264 0.67 1.0 4187 97448
Expression level of Genes
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miRNAs possibly regulated by vista42788[chr3:150478267-150478712]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results