EnhancerDB
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  3. vista4279[chr1:185796352-185796554]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4279[chr1:185796352-185796554]
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Tissue distribution of vista4279
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Transcription factor that possibly regulate vista4279[chr1:185796352-185796554]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 185796352 185796370 IRF2 JASPAR yes 118418033
chr1 185796353 185796364 E2F6 JASPAR yes 118418034
chr1 185796354 185796375 IRF1 JASPAR yes 118418035
chr1 185796356 185796371 IRF9 JASPAR yes 118418036
chr1 185796358 185796373 STAT2 JASPAR yes 118418037
chr1 185796359 185796371 IRF1 JASPAR yes 118418038
chr1 185796383 185796398 FOXP1 JASPAR yes 118418039
chr1 185796387 185796395 FOXO3 JASPAR yes 118418040
chr1 185796388 185796403 FOXP1 JASPAR yes 118418041
chr1 185796397 185796403 SOX10 JASPAR yes 118418042
chr1 185796412 185796418 TCF4 TRANSFAC yes 118418043
chr1 185796447 185796451 TEAD2 TRANSFAC yes 118418044
chr1 185796447 185796452 TBP TRANSFAC yes 118418045
chr1 185796447 185796453 TMF TRANSFAC yes 118418046
chr1 185796451 185796466 MEF2C JASPAR yes 118418047
chr1 185796452 185796467 MEF2A JASPAR yes 118418048
chr1 185796453 185796465 MEF2A JASPAR yes 118418049
chr1 185796453 185796465 MEF2B JASPAR yes 118418050
chr1 185796453 185796465 MEF2D JASPAR yes 118418051
chr1 185796454 185796464 MEF2A JASPAR yes 118418052
chr1 185796456 185796477 IRF1 JASPAR yes 118418053
chr1 185796463 185796478 IRF9 JASPAR yes 118418054
chr1 185796464 185796478 IRF7 JASPAR yes 118418055
chr1 185796465 185796480 STAT2 JASPAR yes 118418056
chr1 185796491 185796505 FOXF2 JASPAR yes 118418057
chr1 185796492 185796500 FOXG1 JASPAR yes 118418058
chr1 185796508 185796520 FOXC2 JASPAR yes 118418059
chr1 185796510 185796516 NFIC JASPAR yes 118418060
chr1 185796510 185796521 CDX2 JASPAR yes 118418061
chr1 185796511 185796522 HOXA10 JASPAR yes 118418062
chr1 185796512 185796516 H1TF2 TRANSFAC yes 118418063
chr1 185796512 185796516 NFE TRANSFAC yes 118418064
chr1 185796512 185796516 SRF TRANSFAC yes 118418065
chr1 185796512 185796521 CDX1 JASPAR yes 118418066
chr1 185796512 185796522 HOXA13 JASPAR yes 118418067
chr1 185796512 185796522 HOXB13 JASPAR yes 118418068
chr1 185796512 185796522 HOXD13 JASPAR yes 118418069
chr1 185796513 185796534 IRF1 JASPAR yes 118418070
chr1 185796516 185796522 TBP TRANSFAC yes 118418071
chr1 185796518 185796530 IRF1 JASPAR yes 118418072
SNP sites on vista4279[chr1:185796352-185796554]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista4279[chr1:185796352-185796554]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 185703683 186160085 + HMCN1 ENSG00000143341.7 185703683 0.94 0.93 1654 7331
Expression level of Genes
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miRNAs possibly regulated by vista4279[chr1:185796352-185796554]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results