EnhancerDB
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  3. vista42836[chr3:152100220-152100544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42836[chr3:152100220-152100544]
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Tissue distribution of vista42836
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Transcription factor that possibly regulate vista42836[chr3:152100220-152100544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 152100224 152100238 ONECUT2 JASPAR yes 6696316
chr3 152100224 152100238 ONECUT3 JASPAR yes 6696317
chr3 152100224 152100238 ONECUT2 JASPAR yes 71070054
chr3 152100224 152100238 ONECUT3 JASPAR yes 71070055
chr3 152100227 152100248 IRF1 JASPAR yes 6696318
chr3 152100227 152100248 IRF1 JASPAR yes 71070056
chr3 152100244 152100255 NFKB1 JASPAR yes 6696319
chr3 152100244 152100255 NFKB1 JASPAR yes 71070057
chr3 152100253 152100259 NFE2 TRANSFAC yes 6696320
chr3 152100253 152100259 NFE2 TRANSFAC yes 71070058
chr3 152100279 152100293 PAX6 JASPAR yes 6696321
chr3 152100279 152100293 PAX6 JASPAR yes 71070059
chr3 152100283 152100296 EOMES JASPAR yes 6696322
chr3 152100283 152100296 EOMES JASPAR yes 71070060
chr3 152100284 152100294 TBR1 JASPAR yes 6696323
chr3 152100284 152100294 TBR1 JASPAR yes 71070061
chr3 152100285 152100306 IRF1 JASPAR yes 6696324
chr3 152100285 152100306 IRF1 JASPAR yes 71070062
chr3 152100288 152100302 IRF7 JASPAR yes 6696325
chr3 152100288 152100302 IRF8 JASPAR yes 6696326
chr3 152100288 152100302 IRF7 JASPAR yes 71070063
chr3 152100288 152100302 IRF8 JASPAR yes 71070064
chr3 152100289 152100304 PRDM1 JASPAR yes 6696327
chr3 152100289 152100304 STAT2 JASPAR yes 6696328
chr3 152100289 152100304 PRDM1 JASPAR yes 71070065
chr3 152100289 152100304 STAT2 JASPAR yes 71070066
chr3 152100291 152100312 IRF1 JASPAR yes 6696329
chr3 152100291 152100312 IRF1 JASPAR yes 71070067
chr3 152100293 152100308 IRF9 JASPAR yes 6696330
chr3 152100293 152100308 IRF9 JASPAR yes 71070068
chr3 152100294 152100308 IRF7 JASPAR yes 6696331
chr3 152100294 152100308 IRF8 JASPAR yes 6696332
chr3 152100294 152100308 IRF7 JASPAR yes 71070069
chr3 152100294 152100308 IRF8 JASPAR yes 71070070
chr3 152100295 152100309 STAT1 JASPAR yes 6696333
chr3 152100295 152100309 STAT1 JASPAR yes 71070071
chr3 152100295 152100310 PRDM1 JASPAR yes 6696334
chr3 152100295 152100310 STAT2 JASPAR yes 6696335
chr3 152100295 152100310 PRDM1 JASPAR yes 71070072
chr3 152100295 152100310 STAT2 JASPAR yes 71070073
chr3 152100295 152100313 IRF2 JASPAR yes 6696336
chr3 152100295 152100313 IRF2 JASPAR yes 71070074
chr3 152100296 152100308 IRF1 JASPAR yes 6696337
chr3 152100296 152100308 IRF1 JASPAR yes 71070075
chr3 152100299 152100314 IRF9 JASPAR yes 6696338
chr3 152100299 152100314 IRF9 JASPAR yes 71070076
chr3 152100308 152100314 TBP TRANSFAC yes 6696339
chr3 152100308 152100314 TBP TRANSFAC yes 71070077
chr3 152100320 152100335 AR JASPAR yes 6696340
chr3 152100320 152100335 AR JASPAR yes 71070078
chr3 152100332 152100346 EBF1 JASPAR yes 6696341
chr3 152100332 152100346 EBF1 JASPAR yes 71070079
chr3 152100334 152100345 EBF1 JASPAR yes 6696342
chr3 152100334 152100345 EBF1 JASPAR yes 71070080
chr3 152100351 152100355 YY1 TRANSFAC yes 6696343
chr3 152100351 152100355 YY1 TRANSFAC yes 71070081
chr3 152100360 152100369 NKX3-2 JASPAR yes 6696344
chr3 152100360 152100369 NKX3-2 JASPAR yes 71070082
chr3 152100365 152100385 TP53 JASPAR yes 6696345
chr3 152100365 152100385 TP53 JASPAR yes 71070083
chr3 152100366 152100370 YY1 TRANSFAC yes 6696346
chr3 152100366 152100370 YY1 TRANSFAC yes 71070084
chr3 152100366 152100381 STAT1 JASPAR yes 6696347
chr3 152100366 152100381 STAT1 JASPAR yes 71070085
chr3 152100368 152100379 STAT1 JASPAR yes 6696348
chr3 152100368 152100379 STAT3 JASPAR yes 6696349
chr3 152100368 152100379 STAT1 JASPAR yes 71070086
chr3 152100368 152100379 STAT3 JASPAR yes 71070087
chr3 152100392 152100397 GATA2 JASPAR yes 6696350
chr3 152100392 152100397 GATA2 JASPAR yes 71070088
chr3 152100399 152100409 GBX2 JASPAR yes 6696351
chr3 152100399 152100409 MNX1 JASPAR yes 6696352
chr3 152100399 152100409 RAX JASPAR yes 6696353
chr3 152100399 152100409 GBX2 JASPAR yes 71070089
chr3 152100399 152100409 MNX1 JASPAR yes 71070090
chr3 152100399 152100409 RAX JASPAR yes 71070091
chr3 152100400 152100408 BARX1 JASPAR yes 6696354
chr3 152100400 152100408 BSX JASPAR yes 6696355
chr3 152100400 152100408 ISL2 JASPAR yes 6696356
chr3 152100400 152100408 LMX1B JASPAR yes 6696357
chr3 152100400 152100408 MSX1 JASPAR yes 6696358
chr3 152100400 152100408 MSX2 JASPAR yes 6696359
chr3 152100400 152100408 BARX1 JASPAR yes 71070092
chr3 152100400 152100408 BSX JASPAR yes 71070093
chr3 152100400 152100408 ISL2 JASPAR yes 71070094
chr3 152100400 152100408 LMX1B JASPAR yes 71070095
chr3 152100400 152100408 MSX1 JASPAR yes 71070096
chr3 152100400 152100408 MSX2 JASPAR yes 71070097
chr3 152100417 152100421 YY1 TRANSFAC yes 6696360
chr3 152100417 152100421 YY1 TRANSFAC yes 71070098
chr3 152100433 152100440 NFATC2 JASPAR yes 6696361
chr3 152100433 152100440 NFATC2 JASPAR yes 71070099
chr3 152100449 152100453 YY1 TRANSFAC yes 6696362
chr3 152100449 152100453 YY1 TRANSFAC yes 71070100
chr3 152100470 152100474 TEAD2 TRANSFAC yes 6696363
chr3 152100470 152100474 TEAD2 TRANSFAC yes 71070101
chr3 152100470 152100475 TBP TRANSFAC yes 6696364
chr3 152100470 152100475 TBP TRANSFAC yes 71070102
chr3 152100470 152100476 TFIID TRANSFAC yes 6696365
chr3 152100470 152100476 TFIID TRANSFAC yes 71070103
chr3 152100479 152100497 RARA JASPAR yes 6696366
chr3 152100479 152100497 RARA JASPAR yes 71070104
chr3 152100489 152100510 IRF1 JASPAR yes 6696367
chr3 152100489 152100510 IRF1 JASPAR yes 71070105
chr3 152100491 152100506 STAT2 JASPAR yes 6696368
chr3 152100491 152100506 STAT2 JASPAR yes 71070106
chr3 152100493 152100508 IRF9 JASPAR yes 6696369
chr3 152100493 152100508 IRF9 JASPAR yes 71070107
chr3 152100495 152100516 IRF1 JASPAR yes 6696370
chr3 152100495 152100516 IRF1 JASPAR yes 71070108
chr3 152100504 152100508 YY1 TRANSFAC yes 6696371
chr3 152100504 152100508 YY1 TRANSFAC yes 71070109
chr3 152100513 152100528 FOXP1 JASPAR yes 6696372
chr3 152100513 152100528 FOXP1 JASPAR yes 71070110
chr3 152100543 152100547 NFE TRANSFAC yes 6696373
chr3 152100543 152100547 NFE TRANSFAC yes 71070111
chr3 152100543 152100548 GATA1 TRANSFAC yes 6696374
chr3 152100543 152100548 GATA1 TRANSFAC yes 71070112
chr3 152100543 152100549 GATA3 JASPAR yes 6696375
chr3 152100543 152100549 GATA3 JASPAR yes 71070113
SNP sites on vista42836[chr3:152100220-152100544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 152100230 rs16864231 A G
IRF1 ONECUT2 ONECUT3
7118601
chr3 152100371 rs546625985 T G
STAT1 STAT3 TP53
7118602
chr3 152100477 rs11925092 A T no 7118603
chr3 152100533 rs568921260 C T no 7118604
Genes possibly regulated by vista42836[chr3:152100220-152100544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 152057484 152058779 - TMEM14E ENSG00000221962.3 152058779 0.88 0.97 4202 58559
Expression level of Genes
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miRNAs possibly regulated by vista42836[chr3:152100220-152100544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results