EnhancerDB
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  3. vista42853[chr3:152878171-152878732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42853[chr3:152878171-152878732]
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Tissue distribution of vista42853
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Transcription factor that possibly regulate vista42853[chr3:152878171-152878732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 152878029 152881516 POLR2A UCSC Txn Factor no Conserved 108530769
chr3 152878213 152878548 EBF1 UCSC Txn Factor no Conserved 108530770
chr3 152878264 152878494 SPI1 UCSC Txn Factor no Conserved 108530771
chr3 152878178 152878189 ESRRB JASPAR yes 71070957
chr3 152878178 152878193 PRDM1 JASPAR yes 71070958
chr3 152878225 152878234 HIC2 JASPAR yes 71070959
chr3 152878228 152878232 LFA1 TRANSFAC yes 71070960
chr3 152878230 152878250 RREB1 JASPAR yes 71070961
chr3 152878235 152878245 SP1 JASPAR yes 71070962
chr3 152878235 152878255 RREB1 JASPAR yes 71070963
chr3 152878239 152878249 SP1 JASPAR yes 71070964
chr3 152878258 152878262 LFA1 TRANSFAC yes 71070965
chr3 152878272 152878277 SP1 TRANSFAC yes 71070966
chr3 152878315 152878321 ETS1 JASPAR yes 71070967
chr3 152878315 152878321 SPI1 JASPAR yes 71070968
chr3 152878328 152878340 INSM1 JASPAR yes 71070969
chr3 152878333 152878348 NR2C2 JASPAR yes 71070970
chr3 152878334 152878348 RXRB JASPAR yes 71070971
chr3 152878334 152878348 RXRG JASPAR yes 71070972
chr3 152878344 152878354 HMBOX1 JASPAR yes 71070973
chr3 152878345 152878353 LBX1 JASPAR yes 71070974
chr3 152878346 152878349 MYB TRANSFAC yes 71070975
chr3 152878358 152878372 JUN JASPAR yes 71070976
chr3 152878361 152878372 FOSL2 JASPAR yes 71070977
chr3 152878361 152878372 JUNB JASPAR yes 71070978
chr3 152878362 152878373 FOSL1 JASPAR yes 71070979
chr3 152878362 152878373 JUND JASPAR yes 71070980
chr3 152878362 152878373 NFE2 JASPAR yes 71070981
chr3 152878363 152878372 JDP2 JASPAR yes 71070982
chr3 152878363 152878374 FOSL2 JASPAR yes 71070983
chr3 152878363 152878374 JUNB JASPAR yes 71070984
chr3 152878377 152878398 IRF1 JASPAR yes 71070985
chr3 152878379 152878394 IRF9 JASPAR yes 71070986
chr3 152878381 152878395 STAT1 JASPAR yes 71070987
chr3 152878381 152878396 STAT2 JASPAR yes 71070988
chr3 152878382 152878394 IRF1 JASPAR yes 71070989
chr3 152878403 152878412 HIC2 JASPAR yes 71070990
chr3 152878423 152878435 HINFP JASPAR yes 71070991
chr3 152878444 152878459 JUND JASPAR yes 71070992
chr3 152878447 152878459 JDP2 JASPAR yes 71070993
chr3 152878448 152878461 JUN JASPAR yes 71070994
chr3 152878449 152878456 JUN TRANSFAC yes 71070995
chr3 152878481 152878502 ZNF263 JASPAR yes 71070996
chr3 152878489 152878500 E2F6 JASPAR yes 71070997
chr3 152878490 152878511 ZNF263 JASPAR yes 71070998
chr3 152878491 152878512 ZNF263 JASPAR yes 71070999
chr3 152878495 152878505 MZF1 JASPAR yes 71071000
chr3 152878496 152878502 MZF1 JASPAR yes 71071001
chr3 152878532 152878552 TP53 JASPAR yes 71071002
chr3 152878534 152878554 TP63 JASPAR yes 71071003
chr3 152878535 152878553 TP73 JASPAR yes 71071004
chr3 152878548 152878557 SP1 TRANSFAC yes 71071005
chr3 152878576 152878596 TP53 JASPAR yes 71071006
chr3 152878578 152878598 TP63 JASPAR yes 71071007
chr3 152878579 152878597 TP53 JASPAR yes 71071008
chr3 152878579 152878597 TP63 JASPAR yes 71071009
chr3 152878579 152878597 TP73 JASPAR yes 71071010
chr3 152878580 152878600 TP53 JASPAR yes 71071011
chr3 152878581 152878596 TP53 JASPAR yes 71071012
chr3 152878586 152878599 NFKB2 JASPAR yes 71071013
chr3 152878587 152878598 NFKB1 JASPAR yes 71071014
chr3 152878588 152878592 LFA1 TRANSFAC yes 71071015
chr3 152878614 152878634 TP63 JASPAR yes 71071016
chr3 152878618 152878637 PAX5 JASPAR yes 71071017
chr3 152878660 152878671 FLI1 JASPAR yes 71071018
chr3 152878661 152878671 ETV6 JASPAR yes 71071019
chr3 152878664 152878671 SPIB JASPAR yes 71071020
chr3 152878673 152878691 TP73 JASPAR yes 71071021
chr3 152878692 152878702 MZF1 JASPAR yes 71071022
chr3 152878695 152878701 SP1 TRANSFAC yes 71071023
chr3 152878715 152878725 NKX2-3 JASPAR yes 71071024
chr3 152878726 152878730 YY1 TRANSFAC yes 71071025
SNP sites on vista42853[chr3:152878171-152878732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 152878237 rs144281294 C T
EBF1 POLR2A RREB1 SP1
7122697
chr3 152878322 rs76484938 C A
EBF1 POLR2A SPI1
7122698
chr3 152878393 rs192987417 C A,G
EBF1 IRF1 IRF9 POLR2A SPI1 STAT1 STAT2
7122699
chr3 152878572 rs535998465 G A
POLR2A
7122700
chr3 152878711 rs558160228 C G
POLR2A
7122701
chr3 152878719 rs894802 A C,G
NKX2-3 POLR2A
7122702
Genes possibly regulated by vista42853[chr3:152878171-152878732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 152880029 152886265 + RAP2B ENSG00000181467.2 152880029 0.66 1.0 4204 98703
Expression level of Genes
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miRNAs possibly regulated by vista42853[chr3:152878171-152878732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results