EnhancerDB
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  3. vista43301[chr3:178423779-178424120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43301[chr3:178423779-178424120]
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Tissue distribution of vista43301
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Transcription factor that possibly regulate vista43301[chr3:178423779-178424120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 178423779 178423799 RREB1 JASPAR yes 7968441
chr3 178423779 178423799 RREB1 JASPAR yes 71092226
chr3 178423782 178423802 RREB1 JASPAR yes 7968442
chr3 178423782 178423802 RREB1 JASPAR yes 71092227
chr3 178423799 178423807 TBX5 JASPAR yes 7968443
chr3 178423799 178423807 TBX5 JASPAR yes 71092228
chr3 178423803 178423819 POU4F2 JASPAR yes 7968444
chr3 178423803 178423819 POU4F2 JASPAR yes 71092229
chr3 178423805 178423819 POU4F1 JASPAR yes 7968445
chr3 178423805 178423819 POU4F1 JASPAR yes 71092230
chr3 178423818 178423824 MAZ TRANSFAC yes 7968446
chr3 178423818 178423824 MAZ TRANSFAC yes 71092231
chr3 178423818 178423829 E2F6 JASPAR yes 7968447
chr3 178423818 178423829 E2F6 JASPAR yes 71092232
chr3 178423820 178423828 SP1 TRANSFAC yes 7968448
chr3 178423820 178423828 SP1 TRANSFAC yes 71092233
chr3 178423820 178423830 SP1 JASPAR yes 7968449
chr3 178423820 178423830 SP1 JASPAR yes 71092234
chr3 178423822 178423828 MAZ TRANSFAC yes 7968450
chr3 178423822 178423828 MAZ TRANSFAC yes 71092235
chr3 178423823 178423833 MZF1 JASPAR yes 7968451
chr3 178423823 178423833 MZF1 JASPAR yes 71092236
chr3 178423858 178423863 MYC TRANSFAC yes 7968452
chr3 178423858 178423863 MYC TRANSFAC yes 71092237
chr3 178423862 178423873 TFAP2A JASPAR yes 7968453
chr3 178423862 178423873 TFAP2B JASPAR yes 7968454
chr3 178423862 178423873 TFAP2C JASPAR yes 7968455
chr3 178423862 178423873 TFAP2A JASPAR yes 71092238
chr3 178423862 178423873 TFAP2B JASPAR yes 71092239
chr3 178423862 178423873 TFAP2C JASPAR yes 71092240
chr3 178423882 178423885 MYB TRANSFAC yes 7968456
chr3 178423882 178423885 MYB TRANSFAC yes 71092241
chr3 178423891 178423911 TP53 JASPAR yes 7968457
chr3 178423891 178423911 TP53 JASPAR yes 71092242
chr3 178423894 178423912 TP53 JASPAR yes 7968458
chr3 178423894 178423912 TP53 JASPAR yes 71092243
chr3 178423895 178423910 TP53 JASPAR yes 7968459
chr3 178423895 178423910 TP53 JASPAR yes 71092244
chr3 178423912 178423923 FLI1 JASPAR yes 7968460
chr3 178423912 178423923 FLI1 JASPAR yes 71092245
chr3 178423913 178423917 YY1 TRANSFAC yes 7968461
chr3 178423913 178423917 YY1 TRANSFAC yes 71092246
chr3 178423913 178423926 ELF1 JASPAR yes 7968462
chr3 178423913 178423926 ELF1 JASPAR yes 71092247
chr3 178423914 178423922 FEV JASPAR yes 7968463
chr3 178423914 178423922 FEV JASPAR yes 71092248
chr3 178423949 178423961 FOXI1 JASPAR yes 7968464
chr3 178423949 178423961 FOXI1 JASPAR yes 71092249
chr3 178423952 178423956 YY1 TRANSFAC yes 7968465
chr3 178423952 178423956 YY1 TRANSFAC yes 71092250
chr3 178423954 178423966 FOXC2 JASPAR yes 7968466
chr3 178423954 178423966 FOXC2 JASPAR yes 71092251
chr3 178423954 178423967 POU2F2 JASPAR yes 7968467
chr3 178423954 178423967 POU2F2 JASPAR yes 71092252
chr3 178423955 178423968 POU3F3 JASPAR yes 7968468
chr3 178423955 178423968 POU3F3 JASPAR yes 71092253
chr3 178423956 178423960 YY1 TRANSFAC yes 7968469
chr3 178423956 178423960 YY1 TRANSFAC yes 71092254
chr3 178423975 178423987 TAL1 JASPAR yes 7968470
chr3 178423975 178423987 TAL1 JASPAR yes 71092255
chr3 178423976 178423988 NHLH1 JASPAR yes 7968471
chr3 178423976 178423988 NHLH1 JASPAR yes 71092256
chr3 178423977 178423987 MSC JASPAR yes 7968472
chr3 178423977 178423987 NHLH1 JASPAR yes 7968473
chr3 178423977 178423987 TFAP4 JASPAR yes 7968474
chr3 178423977 178423987 MSC JASPAR yes 71092257
chr3 178423977 178423987 NHLH1 JASPAR yes 71092258
chr3 178423977 178423987 TFAP4 JASPAR yes 71092259
chr3 178423996 178424002 SOX10 JASPAR yes 7968475
chr3 178423996 178424002 SOX10 JASPAR yes 71092260
chr3 178424003 178424011 SP1 TRANSFAC yes 7968476
chr3 178424003 178424011 SP1 TRANSFAC yes 71092261
chr3 178424026 178424041 MEF2C JASPAR yes 7968477
chr3 178424026 178424041 MEF2C JASPAR yes 71092262
chr3 178424027 178424039 MEF2B JASPAR yes 7968478
chr3 178424027 178424039 MEF2B JASPAR yes 71092263
chr3 178424029 178424033 YY1 TRANSFAC yes 7968479
chr3 178424029 178424033 YY1 TRANSFAC yes 71092264
chr3 178424037 178424048 ESRRA JASPAR yes 7968480
chr3 178424037 178424048 ESRRB JASPAR yes 7968481
chr3 178424037 178424048 ESRRA JASPAR yes 71092265
chr3 178424037 178424048 ESRRB JASPAR yes 71092266
chr3 178424038 178424056 ESR2 JASPAR yes 7968482
chr3 178424038 178424056 ESR2 JASPAR yes 71092267
chr3 178424039 178424047 NR4A2 JASPAR yes 7968483
chr3 178424039 178424047 NR4A2 JASPAR yes 71092268
chr3 178424039 178424056 ESR1 JASPAR yes 7968484
chr3 178424039 178424056 ESR1 JASPAR yes 71092269
chr3 178424040 178424055 ESR2 JASPAR yes 7968485
chr3 178424040 178424055 ESR2 JASPAR yes 71092270
chr3 178424041 178424045 ESR1 TRANSFAC yes 7968486
chr3 178424041 178424045 ESR1 TRANSFAC yes 71092271
chr3 178424072 178424076 TEAD2 TRANSFAC yes 7968487
chr3 178424072 178424076 TEAD2 TRANSFAC yes 71092272
chr3 178424075 178424085 GSX2 JASPAR yes 7968488
chr3 178424075 178424085 HOXB2 JASPAR yes 7968489
chr3 178424075 178424085 HOXB3 JASPAR yes 7968490
chr3 178424075 178424085 MNX1 JASPAR yes 7968491
chr3 178424075 178424085 POU6F1 JASPAR yes 7968492
chr3 178424075 178424085 GSX2 JASPAR yes 71092273
chr3 178424075 178424085 HOXB2 JASPAR yes 71092274
chr3 178424075 178424085 HOXB3 JASPAR yes 71092275
chr3 178424075 178424085 MNX1 JASPAR yes 71092276
chr3 178424075 178424085 POU6F1 JASPAR yes 71092277
chr3 178424075 178424086 HOXA10 JASPAR yes 7968493
chr3 178424075 178424086 HOXA10 JASPAR yes 71092278
chr3 178424075 178424089 POU1F1 JASPAR yes 7968494
chr3 178424075 178424089 POU1F1 JASPAR yes 71092279
chr3 178424076 178424084 LMX1A JASPAR yes 7968495
chr3 178424076 178424084 LMX1B JASPAR yes 7968496
chr3 178424076 178424084 NKX6-1 JASPAR yes 7968497
chr3 178424076 178424084 NKX6-2 JASPAR yes 7968498
chr3 178424076 178424084 VAX1 JASPAR yes 7968499
chr3 178424076 178424084 VAX2 JASPAR yes 7968500
chr3 178424076 178424084 VSX1 JASPAR yes 7968501
chr3 178424076 178424084 VSX2 JASPAR yes 7968502
chr3 178424076 178424084 LMX1A JASPAR yes 71092280
chr3 178424076 178424084 LMX1B JASPAR yes 71092281
chr3 178424076 178424084 NKX6-1 JASPAR yes 71092282
chr3 178424076 178424084 NKX6-2 JASPAR yes 71092283
chr3 178424076 178424084 VAX1 JASPAR yes 71092284
chr3 178424076 178424084 VAX2 JASPAR yes 71092285
chr3 178424076 178424084 VSX1 JASPAR yes 71092286
chr3 178424076 178424084 VSX2 JASPAR yes 71092287
chr3 178424077 178424088 PHOX2A JASPAR yes 7968503
chr3 178424077 178424088 PROP1 JASPAR yes 7968504
chr3 178424077 178424088 PHOX2A JASPAR yes 71092288
chr3 178424077 178424088 PROP1 JASPAR yes 71092289
chr3 178424080 178424095 JUND JASPAR yes 7968505
chr3 178424080 178424095 JUND JASPAR yes 71092290
chr3 178424118 178424129 NFKB1 JASPAR yes 7968506
chr3 178424118 178424129 NFKB1 JASPAR yes 71092291
SNP sites on vista43301[chr3:178423779-178424120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 178423851 rs13071153 C A no 7227643
chr3 178423893 rs76444070 A G
TP53
7227644
chr3 178424000 rs141666820 A G,T
SOX10
7227645
chr3 178424105 rs9820218 C T no 7227646
Genes possibly regulated by vista43301[chr3:178423779-178424120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43301[chr3:178423779-178424120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results