EnhancerDB
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  3. vista43312[chr3:178978348-178978737]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43312[chr3:178978348-178978737]
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Tissue distribution of vista43312
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Transcription factor that possibly regulate vista43312[chr3:178978348-178978737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 178978730 178979480 POLR2A UCSC Txn Factor no Conserved 108531204
chr3 178978344 178978348 H4TF2 TRANSFAC yes 7990438
chr3 178978344 178978348 H4TF2 TRANSFAC yes 71092829
chr3 178978355 178978359 NFE TRANSFAC yes 7990439
chr3 178978355 178978359 NFE TRANSFAC yes 71092830
chr3 178978367 178978371 LFA1 TRANSFAC yes 7990440
chr3 178978367 178978371 LFA1 TRANSFAC yes 71092831
chr3 178978370 178978374 YY1 TRANSFAC yes 7990441
chr3 178978370 178978374 YY1 TRANSFAC yes 71092832
chr3 178978374 178978377 MYB TRANSFAC yes 7990442
chr3 178978374 178978377 MYB TRANSFAC yes 71092833
chr3 178978381 178978394 ATF4 JASPAR yes 7990443
chr3 178978381 178978394 ATF4 JASPAR yes 71092834
chr3 178978415 178978419 YY1 TRANSFAC yes 7990444
chr3 178978415 178978419 YY1 TRANSFAC yes 71092835
chr3 178978430 178978436 ETS1 JASPAR yes 7990445
chr3 178978430 178978436 SPI1 JASPAR yes 7990446
chr3 178978430 178978436 ETS1 JASPAR yes 71092836
chr3 178978430 178978436 SPI1 JASPAR yes 71092837
chr3 178978446 178978456 HMBOX1 JASPAR yes 7990447
chr3 178978446 178978456 HMBOX1 JASPAR yes 71092838
chr3 178978448 178978451 MYB TRANSFAC yes 7990448
chr3 178978448 178978451 MYB TRANSFAC yes 71092839
chr3 178978448 178978463 MEF2A JASPAR yes 7990449
chr3 178978448 178978463 MEF2A JASPAR yes 71092840
chr3 178978449 178978464 MEF2C JASPAR yes 7990450
chr3 178978449 178978464 MEF2C JASPAR yes 71092841
chr3 178978452 178978456 YY1 TRANSFAC yes 7990451
chr3 178978452 178978456 YY1 TRANSFAC yes 71092842
chr3 178978465 178978473 OTX2 JASPAR yes 7990452
chr3 178978465 178978473 OTX2 JASPAR yes 71092843
chr3 178978477 178978497 TP53 JASPAR yes 7990453
chr3 178978477 178978497 TP53 JASPAR yes 71092844
chr3 178978480 178978493 HSF2 JASPAR yes 7990454
chr3 178978480 178978493 HSF2 JASPAR yes 71092845
chr3 178978487 178978498 FLI1 JASPAR yes 7990455
chr3 178978487 178978498 FLI1 JASPAR yes 71092846
chr3 178978488 178978492 YY1 TRANSFAC yes 7990456
chr3 178978488 178978492 YY1 TRANSFAC yes 71092847
chr3 178978488 178978498 ETV6 JASPAR yes 7990457
chr3 178978488 178978498 ETV6 JASPAR yes 71092848
chr3 178978488 178978501 ELF1 JASPAR yes 7990458
chr3 178978488 178978501 ELF1 JASPAR yes 71092849
chr3 178978489 178978497 FEV JASPAR yes 7990459
chr3 178978489 178978497 FEV JASPAR yes 71092850
chr3 178978491 178978498 SPIB JASPAR yes 7990460
chr3 178978491 178978498 SPIB JASPAR yes 71092851
chr3 178978494 178978509 FOXP1 JASPAR yes 7990461
chr3 178978494 178978509 FOXP1 JASPAR yes 71092852
chr3 178978498 178978513 TFAP2A JASPAR yes 7990462
chr3 178978498 178978513 TFAP2C JASPAR yes 7990463
chr3 178978498 178978513 TFAP2A JASPAR yes 71092853
chr3 178978498 178978513 TFAP2C JASPAR yes 71092854
chr3 178978503 178978523 ESR1 JASPAR yes 7990464
chr3 178978503 178978523 ESR1 JASPAR yes 71092855
chr3 178978507 178978525 ESR1 JASPAR yes 7990465
chr3 178978507 178978525 ESR1 JASPAR yes 71092856
chr3 178978521 178978542 IRF1 JASPAR yes 7990466
chr3 178978521 178978542 IRF1 JASPAR yes 71092857
chr3 178978523 178978538 IRF9 JASPAR yes 7990467
chr3 178978523 178978538 IRF9 JASPAR yes 71092858
chr3 178978524 178978538 IRF7 JASPAR yes 7990468
chr3 178978524 178978538 IRF7 JASPAR yes 71092859
chr3 178978525 178978539 STAT1 JASPAR yes 7990469
chr3 178978525 178978539 STAT1 JASPAR yes 71092860
chr3 178978525 178978540 STAT2 JASPAR yes 7990470
chr3 178978525 178978540 STAT2 JASPAR yes 71092861
chr3 178978526 178978538 IRF1 JASPAR yes 7990471
chr3 178978526 178978538 IRF1 JASPAR yes 71092862
chr3 178978553 178978574 IRF1 JASPAR yes 7990472
chr3 178978553 178978574 IRF1 JASPAR yes 71092863
chr3 178978561 178978575 TCF7L2 JASPAR yes 7990473
chr3 178978561 178978575 TCF7L2 JASPAR yes 71092864
chr3 178978570 178978582 FOXI1 JASPAR yes 7990474
chr3 178978570 178978582 FOXI1 JASPAR yes 71092865
chr3 178978571 178978583 FOXC2 JASPAR yes 7990475
chr3 178978571 178978583 FOXC2 JASPAR yes 71092866
chr3 178978573 178978577 YY1 TRANSFAC yes 7990476
chr3 178978573 178978577 YY1 TRANSFAC yes 71092867
chr3 178978574 178978589 FOXP1 JASPAR yes 7990477
chr3 178978574 178978589 FOXP1 JASPAR yes 71092868
chr3 178978581 178978600 REST JASPAR yes 7990478
chr3 178978581 178978600 REST JASPAR yes 71092869
chr3 178978591 178978605 E2F7 JASPAR yes 7990479
chr3 178978591 178978605 E2F7 JASPAR yes 71092870
chr3 178978607 178978619 TAL1 JASPAR yes 7990480
chr3 178978607 178978619 TAL1 JASPAR yes 71092871
chr3 178978607 178978620 ZBTB18 JASPAR yes 7990481
chr3 178978607 178978620 ZBTB18 JASPAR yes 71092872
chr3 178978609 178978619 MSC JASPAR yes 7990482
chr3 178978609 178978619 MYF6 JASPAR yes 7990483
chr3 178978609 178978619 TFAP4 JASPAR yes 7990484
chr3 178978609 178978619 MSC JASPAR yes 71092873
chr3 178978609 178978619 MYF6 JASPAR yes 71092874
chr3 178978609 178978619 TFAP4 JASPAR yes 71092875
chr3 178978609 178978621 TAL1 JASPAR yes 7990485
chr3 178978609 178978621 TAL1 JASPAR yes 71092876
chr3 178978645 178978656 TBX2 JASPAR yes 7990486
chr3 178978645 178978656 TBX2 JASPAR yes 71092877
chr3 178978670 178978685 FOXP1 JASPAR yes 7990487
chr3 178978670 178978685 FOXP1 JASPAR yes 71092878
chr3 178978671 178978682 FOXP2 JASPAR yes 7990488
chr3 178978671 178978682 FOXP2 JASPAR yes 71092879
chr3 178978673 178978681 FOXO3 JASPAR yes 7990489
chr3 178978673 178978681 FOXO3 JASPAR yes 71092880
chr3 178978673 178978684 FOXA1 JASPAR yes 7990490
chr3 178978673 178978684 FOXA1 JASPAR yes 71092881
chr3 178978686 178978689 MYB TRANSFAC yes 7990491
chr3 178978686 178978689 MYB TRANSFAC yes 71092882
chr3 178978695 178978705 NFATC3 JASPAR yes 7990492
chr3 178978695 178978705 NFATC3 JASPAR yes 71092883
chr3 178978697 178978704 NFATC2 JASPAR yes 7990493
chr3 178978697 178978704 NFATC2 JASPAR yes 71092884
chr3 178978698 178978706 FOXO3 JASPAR yes 7990494
chr3 178978698 178978706 FOXO3 JASPAR yes 71092885
chr3 178978717 178978721 YY1 TRANSFAC yes 7990495
chr3 178978717 178978721 YY1 TRANSFAC yes 71092886
SNP sites on vista43312[chr3:178978348-178978737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 178978372 rs9853868 A G
YY1
7229376
chr3 178978392 rs537744657 T C
ATF4
7229377
chr3 178978431 rs188934706 C T
ETS1 SPI1
7229378
chr3 178978525 rs139927105 A G
ESR1 IRF1 IRF7 IRF9 STAT1 STAT2
7229379
chr3 178978532 rs73188910 T C
IRF1 IRF7 IRF9 STAT1 STAT2
7229380
chr3 178978542 rs62410372 G A
IRF1
7229381
chr3 178978599 rs181346013 G A
E2F7 REST
7229382
chr3 178978604 rs7429685 T G
E2F7
7229383
chr3 178978637 rs183984907 A G no 7229384
chr3 178978648 rs73188912 G A
TBX2
7229385
chr3 178978689 rs62410373 A G
MYB
7229386
chr3 178978700 rs550497738 G GA
FOXO3 NFATC2 NFATC3
7229387
chr3 178978707 rs189208615 T C no 7229388
chr3 178978718 rs62410374 C T
YY1
7229389
Genes possibly regulated by vista43312[chr3:178978348-178978737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 178957530 178984790 - KCNMB3 ENSG00000171121.12 178984790 0.75 0.95 4292 93947
chr3 179040779 179053323 + ZNF639 ENSG00000121864.5 179040779 0.57 0.99 4293 37958
chr3 179065480 179112719 + MFN1 ENSG00000171109.14 179065480 0.68 0.99 4294 13257
Expression level of Genes
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miRNAs possibly regulated by vista43312[chr3:178978348-178978737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results