EnhancerDB
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  3. vista43316[chr3:179161841-179162229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43316[chr3:179161841-179162229]
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Tissue distribution of vista43316
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Transcription factor that possibly regulate vista43316[chr3:179161841-179162229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 179161869 179161887 MAFF JASPAR yes 71092969
chr3 179161870 179161874 NFE TRANSFAC yes 71092970
chr3 179161870 179161885 MAFK JASPAR yes 71092971
chr3 179161879 179161883 YY1 TRANSFAC yes 71092972
chr3 179161894 179161900 TCF4 TRANSFAC yes 71092973
chr3 179161902 179161915 POU2F2 JASPAR yes 71092974
chr3 179161903 179161915 POU3F1 JASPAR yes 71092975
chr3 179161910 179161914 YY1 TRANSFAC yes 71092976
chr3 179161914 179161928 JUN JASPAR yes 71092977
chr3 179161917 179161928 JUNB JASPAR yes 71092978
chr3 179161918 179161929 FOSL1 JASPAR yes 71092979
chr3 179161919 179161930 FOSL2 JASPAR yes 71092980
chr3 179161919 179161930 FOXA1 JASPAR yes 71092981
chr3 179161919 179161934 FOXA1 JASPAR yes 71092982
chr3 179161920 179161931 BATF JASPAR yes 71092983
chr3 179161920 179161932 FOXC2 JASPAR yes 71092984
chr3 179161926 179161940 FOXF2 JASPAR yes 71092985
chr3 179161929 179161941 FOXI1 JASPAR yes 71092986
chr3 179161931 179161939 FOXG1 JASPAR yes 71092987
chr3 179161943 179161956 POU2F2 JASPAR yes 71092988
chr3 179161943 179161957 POU1F1 JASPAR yes 71092989
chr3 179161944 179161955 FOXB1 JASPAR yes 71092990
chr3 179161944 179161956 POU3F1 JASPAR yes 71092991
chr3 179161944 179161956 POU3F2 JASPAR yes 71092992
chr3 179161944 179161957 POU3F3 JASPAR yes 71092993
chr3 179161945 179161957 POU2F1 JASPAR yes 71092994
chr3 179161946 179161955 POU3F4 JASPAR yes 71092995
chr3 179161946 179161955 POU5F1B JASPAR yes 71092996
chr3 179161947 179161955 FOXL1 JASPAR yes 71092997
chr3 179161956 179161959 MYB TRANSFAC yes 71092998
chr3 179161960 179161964 NFE TRANSFAC yes 71092999
chr3 179161960 179161965 GATA1 TRANSFAC yes 71093000
chr3 179161960 179161966 GATA3 JASPAR yes 71093001
chr3 179161964 179161979 FOXP1 JASPAR yes 71093002
chr3 179161967 179161971 YY1 TRANSFAC yes 71093003
chr3 179161994 179162009 RUNX2 JASPAR yes 71093004
chr3 179161997 179162008 RUNX1 JASPAR yes 71093005
chr3 179161998 179162008 RUNX3 JASPAR yes 71093006
chr3 179161999 179162008 RUNX2 JASPAR yes 71093007
chr3 179162002 179162023 IRF1 JASPAR yes 71093008
chr3 179162006 179162018 IRF1 JASPAR yes 71093009
chr3 179162006 179162020 IRF7 JASPAR yes 71093010
chr3 179162011 179162015 YY1 TRANSFAC yes 71093011
chr3 179162016 179162028 E2F8 JASPAR yes 71093012
chr3 179162016 179162030 E2F7 JASPAR yes 71093013
chr3 179162017 179162029 E2F8 JASPAR yes 71093014
chr3 179162034 179162045 EBF1 JASPAR yes 71093015
chr3 179162043 179162057 ONECUT3 JASPAR yes 71093016
chr3 179162045 179162061 POU4F3 JASPAR yes 71093017
chr3 179162047 179162061 POU4F1 JASPAR yes 71093018
chr3 179162047 179162062 HNF1A JASPAR yes 71093019
chr3 179162048 179162061 HNF1B JASPAR yes 71093020
chr3 179162048 179162062 POU4F1 JASPAR yes 71093021
chr3 179162048 179162064 POU4F2 JASPAR yes 71093022
chr3 179162048 179162064 POU4F3 JASPAR yes 71093023
chr3 179162049 179162061 HNF1B JASPAR yes 71093024
chr3 179162049 179162065 POU4F3 JASPAR yes 71093025
chr3 179162051 179162061 LHX6 JASPAR yes 71093026
chr3 179162051 179162061 MNX1 JASPAR yes 71093027
chr3 179162051 179162061 POU6F1 JASPAR yes 71093028
chr3 179162051 179162065 POU4F1 JASPAR yes 71093029
chr3 179162052 179162060 LMX1A JASPAR yes 71093030
chr3 179162052 179162060 LMX1B JASPAR yes 71093031
chr3 179162052 179162060 NKX6-1 JASPAR yes 71093032
chr3 179162052 179162060 NKX6-2 JASPAR yes 71093033
chr3 179162052 179162060 VAX1 JASPAR yes 71093034
chr3 179162052 179162060 VAX2 JASPAR yes 71093035
chr3 179162052 179162060 VSX1 JASPAR yes 71093036
chr3 179162052 179162060 VSX2 JASPAR yes 71093037
chr3 179162053 179162063 PAX7 JASPAR yes 71093038
chr3 179162081 179162088 TBP TRANSFAC yes 71093039
chr3 179162081 179162088 TFIID TRANSFAC yes 71093040
chr3 179162110 179162113 MYB TRANSFAC yes 71093041
chr3 179162142 179162158 POU4F2 JASPAR yes 71093042
chr3 179162142 179162158 POU4F3 JASPAR yes 71093043
chr3 179162148 179162158 HOXD13 JASPAR yes 71093044
chr3 179162148 179162159 HOXA10 JASPAR yes 71093045
chr3 179162149 179162159 EMX1 JASPAR yes 71093046
chr3 179162149 179162159 GBX2 JASPAR yes 71093047
chr3 179162149 179162159 GSX1 JASPAR yes 71093048
chr3 179162149 179162159 GSX2 JASPAR yes 71093049
chr3 179162149 179162159 HOXB2 JASPAR yes 71093050
chr3 179162149 179162159 HOXB3 JASPAR yes 71093051
chr3 179162149 179162159 MEOX1 JASPAR yes 71093052
chr3 179162149 179162159 MEOX2 JASPAR yes 71093053
chr3 179162149 179162159 MIXL1 JASPAR yes 71093054
chr3 179162149 179162159 MNX1 JASPAR yes 71093055
chr3 179162150 179162158 LMX1A JASPAR yes 71093056
chr3 179162150 179162158 LMX1B JASPAR yes 71093057
chr3 179162150 179162158 NKX6-1 JASPAR yes 71093058
chr3 179162150 179162158 NKX6-2 JASPAR yes 71093059
chr3 179162150 179162158 PDX1 JASPAR yes 71093060
chr3 179162150 179162158 VAX1 JASPAR yes 71093061
chr3 179162150 179162158 VAX2 JASPAR yes 71093062
chr3 179162150 179162158 VSX1 JASPAR yes 71093063
chr3 179162164 179162170 TCF4 TRANSFAC yes 71093064
chr3 179162164 179162179 FOXP1 JASPAR yes 71093065
chr3 179162174 179162186 GLI2 JASPAR yes 71093066
chr3 179162174 179162189 RUNX2 JASPAR yes 71093067
chr3 179162197 179162201 YY1 TRANSFAC yes 71093068
chr3 179162205 179162226 IRF1 JASPAR yes 71093069
chr3 179162206 179162221 FOXP1 JASPAR yes 71093070
chr3 179162206 179162227 IRF1 JASPAR yes 71093071
chr3 179162208 179162223 FOXP1 JASPAR yes 71093072
chr3 179162210 179162225 FOXP1 JASPAR yes 71093073
chr3 179162211 179162226 FOXP1 JASPAR yes 71093074
chr3 179162212 179162227 FOXP1 JASPAR yes 71093075
chr3 179162213 179162228 FOXP1 JASPAR yes 71093076
chr3 179162214 179162229 FOXP1 JASPAR yes 71093077
SNP sites on vista43316[chr3:179161841-179162229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 179161846 rs561721397 C CG no 7229961
chr3 179161970 rs112356058 T C
FOXP1 YY1
7229962
chr3 179162015 rs186566282 T C
IRF1 IRF7 YY1
7229963
chr3 179162023 rs549212876 C T
E2F7 E2F8 IRF1
7229964
chr3 179162135 rs571779635 T C no 7229965
chr3 179162217 rs114114266 T G
FOXP1 IRF1
7229966
Genes possibly regulated by vista43316[chr3:179161841-179162229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 179065480 179112719 + MFN1 ENSG00000171109.14 179065480 0.68 0.99 4294 3639
chr3 179116990 179169378 - GNB4 ENSG00000114450.5 179169378 0.79 0.9 4295 92851
Expression level of Genes
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miRNAs possibly regulated by vista43316[chr3:179161841-179162229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results