EnhancerDB
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  3. vista43317[chr3:179165833-179166212]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43317[chr3:179165833-179166212]
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Tissue distribution of vista43317
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Transcription factor that possibly regulate vista43317[chr3:179165833-179166212]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 179165825 179165836 EBF1 JASPAR yes 7995527
chr3 179165825 179165836 EBF1 JASPAR yes 71093078
chr3 179165830 179165841 ESRRA JASPAR yes 7995528
chr3 179165830 179165841 ESRRA JASPAR yes 71093079
chr3 179165846 179165855 SRY JASPAR yes 7995529
chr3 179165846 179165855 SRY JASPAR yes 71093080
chr3 179165866 179165871 GATA2 JASPAR yes 7995530
chr3 179165866 179165871 GATA2 JASPAR yes 71093081
chr3 179165896 179165908 YY1 JASPAR yes 7995531
chr3 179165896 179165908 YY1 JASPAR yes 71093082
chr3 179165899 179165905 YY1 JASPAR yes 7995532
chr3 179165899 179165905 YY1 JASPAR yes 71093083
chr3 179165903 179165917 GATA2 JASPAR yes 7995533
chr3 179165903 179165917 GATA2 JASPAR yes 71093084
chr3 179165905 179165913 GATA3 JASPAR yes 7995534
chr3 179165905 179165913 GATA5 JASPAR yes 7995535
chr3 179165905 179165913 GATA3 JASPAR yes 71093085
chr3 179165905 179165913 GATA5 JASPAR yes 71093086
chr3 179165939 179165945 TCF1 TRANSFAC yes 7995536
chr3 179165939 179165945 TCF1 TRANSFAC yes 71093087
chr3 179165970 179165979 SRY JASPAR yes 7995537
chr3 179165970 179165979 SRY JASPAR yes 71093088
chr3 179165975 179165990 LEF1 JASPAR yes 7995538
chr3 179165975 179165990 LEF1 JASPAR yes 71093089
chr3 179165981 179166002 IRF1 JASPAR yes 7995539
chr3 179165981 179166002 IRF1 JASPAR yes 71093090
chr3 179165983 179165998 STAT2 JASPAR yes 7995540
chr3 179165983 179165998 STAT2 JASPAR yes 71093091
chr3 179165985 179165997 IRF1 JASPAR yes 7995541
chr3 179165985 179165997 IRF1 JASPAR yes 71093092
chr3 179165986 179166001 MEF2A JASPAR yes 7995542
chr3 179165986 179166001 MEF2A JASPAR yes 71093093
chr3 179165987 179166002 MEF2C JASPAR yes 7995543
chr3 179165987 179166002 MEF2C JASPAR yes 71093094
chr3 179165988 179166000 MEF2A JASPAR yes 7995544
chr3 179165988 179166000 MEF2B JASPAR yes 7995545
chr3 179165988 179166000 MEF2D JASPAR yes 7995546
chr3 179165988 179166000 MEF2A JASPAR yes 71093095
chr3 179165988 179166000 MEF2B JASPAR yes 71093096
chr3 179165988 179166000 MEF2D JASPAR yes 71093097
chr3 179165989 179165999 MEF2A JASPAR yes 7995547
chr3 179165989 179165999 MEF2A JASPAR yes 71093098
chr3 179165990 179165994 YY1 TRANSFAC yes 7995548
chr3 179165990 179165994 YY1 TRANSFAC yes 71093099
chr3 179165996 179165999 MYB TRANSFAC yes 7995549
chr3 179165996 179165999 MYB TRANSFAC yes 71093100
chr3 179165996 179166011 PRDM1 JASPAR yes 7995550
chr3 179165996 179166011 STAT2 JASPAR yes 7995551
chr3 179165996 179166011 PRDM1 JASPAR yes 71093101
chr3 179165996 179166011 STAT2 JASPAR yes 71093102
chr3 179166004 179166008 YY1 TRANSFAC yes 7995552
chr3 179166004 179166008 YY1 TRANSFAC yes 71093103
chr3 179166017 179166036 PITX2 TRANSFAC yes 7995553
chr3 179166017 179166036 PITX2 TRANSFAC yes 71093104
chr3 179166023 179166036 ZBTB18 JASPAR yes 7995554
chr3 179166023 179166036 ZBTB18 JASPAR yes 71093105
chr3 179166024 179166036 PKNOX1 JASPAR yes 7995555
chr3 179166024 179166036 TGIF1 JASPAR yes 7995556
chr3 179166024 179166036 PKNOX1 JASPAR yes 71093106
chr3 179166024 179166036 TGIF1 JASPAR yes 71093107
chr3 179166025 179166034 SNAI2 JASPAR yes 7995557
chr3 179166025 179166034 SNAI2 JASPAR yes 71093108
chr3 179166025 179166035 FIGLA JASPAR yes 7995558
chr3 179166025 179166035 ID4 JASPAR yes 7995559
chr3 179166025 179166035 TCF3 JASPAR yes 7995560
chr3 179166025 179166035 TCF4 JASPAR yes 7995561
chr3 179166025 179166035 FIGLA JASPAR yes 71093109
chr3 179166025 179166035 ID4 JASPAR yes 71093110
chr3 179166025 179166035 TCF3 JASPAR yes 71093111
chr3 179166025 179166035 TCF4 JASPAR yes 71093112
chr3 179166027 179166036 ZEB1 JASPAR yes 7995562
chr3 179166027 179166036 ZEB1 JASPAR yes 71093113
chr3 179166027 179166037 TBX21 JASPAR yes 7995563
chr3 179166027 179166037 TBX21 JASPAR yes 71093114
chr3 179166028 179166036 MGA JASPAR yes 7995564
chr3 179166028 179166036 TBX15 JASPAR yes 7995565
chr3 179166028 179166036 TBX1 JASPAR yes 7995566
chr3 179166028 179166036 TBX4 JASPAR yes 7995567
chr3 179166028 179166036 TBX5 JASPAR yes 7995568
chr3 179166028 179166036 MGA JASPAR yes 71093115
chr3 179166028 179166036 TBX15 JASPAR yes 71093116
chr3 179166028 179166036 TBX1 JASPAR yes 71093117
chr3 179166028 179166036 TBX4 JASPAR yes 71093118
chr3 179166028 179166036 TBX5 JASPAR yes 71093119
chr3 179166028 179166038 TBR1 JASPAR yes 7995569
chr3 179166028 179166038 TBR1 JASPAR yes 71093120
chr3 179166028 179166041 SMAD2 JASPAR yes 7995570
chr3 179166028 179166041 SMAD2 JASPAR yes 71093121
chr3 179166032 179166043 FOSL2 JASPAR yes 7995571
chr3 179166032 179166043 FOSL2 JASPAR yes 71093122
chr3 179166051 179166065 STAT1 JASPAR yes 7995572
chr3 179166051 179166065 STAT1 JASPAR yes 71093123
chr3 179166056 179166077 IRF1 JASPAR yes 7995573
chr3 179166056 179166077 IRF1 JASPAR yes 71093124
chr3 179166058 179166069 FOXB1 JASPAR yes 7995574
chr3 179166058 179166069 FOXC1 JASPAR yes 7995575
chr3 179166058 179166069 FOXB1 JASPAR yes 71093125
chr3 179166058 179166069 FOXC1 JASPAR yes 71093126
chr3 179166059 179166067 FOXO3 JASPAR yes 7995576
chr3 179166059 179166067 FOXO3 JASPAR yes 71093127
chr3 179166059 179166070 FOXA1 JASPAR yes 7995577
chr3 179166059 179166070 FOXA1 JASPAR yes 71093128
chr3 179166059 179166073 STAT1 JASPAR yes 7995578
chr3 179166059 179166073 STAT1 JASPAR yes 71093129
chr3 179166060 179166072 IRF1 JASPAR yes 7995579
chr3 179166060 179166072 IRF1 JASPAR yes 71093130
chr3 179166065 179166069 YY1 TRANSFAC yes 7995580
chr3 179166065 179166069 YY1 TRANSFAC yes 71093131
chr3 179166095 179166110 MEF2C JASPAR yes 7995581
chr3 179166095 179166110 MEF2C JASPAR yes 71093132
chr3 179166101 179166115 ONECUT2 JASPAR yes 7995582
chr3 179166101 179166115 ONECUT3 JASPAR yes 7995583
chr3 179166101 179166115 ONECUT2 JASPAR yes 71093133
chr3 179166101 179166115 ONECUT3 JASPAR yes 71093134
chr3 179166116 179166127 BATF JASPAR yes 7995584
chr3 179166116 179166127 BATF JASPAR yes 71093135
chr3 179166119 179166133 POU1F1 JASPAR yes 7995585
chr3 179166119 179166133 POU1F1 JASPAR yes 71093136
chr3 179166121 179166125 YY1 TRANSFAC yes 7995586
chr3 179166121 179166125 YY1 TRANSFAC yes 71093137
chr3 179166135 179166139 TEAD2 TRANSFAC yes 7995587
chr3 179166135 179166139 TEAD2 TRANSFAC yes 71093138
chr3 179166178 179166190 FOXI1 JASPAR yes 7995588
chr3 179166178 179166190 FOXI1 JASPAR yes 71093139
chr3 179166180 179166192 MEF2D JASPAR yes 7995589
chr3 179166180 179166192 MEF2D JASPAR yes 71093140
SNP sites on vista43317[chr3:179165833-179166212]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 179165854 rs116213813 C T
SRY
7230009
chr3 179165887 rs76260794 G A,C no 7230010
chr3 179165949 rs115270803 T C no 7230011
chr3 179166048 rs534168753 T C no 7230012
chr3 179166083 rs2111279 G A no 7230013
chr3 179166084 rs75766215 T C no 7230014
chr3 179166101 rs76371960 C G
MEF2C ONECUT2 ONECUT3
7230015
chr3 179166141 rs116662955 T C no 7230016
chr3 179166194 rs7618766 T C no 7230017
Genes possibly regulated by vista43317[chr3:179165833-179166212]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 179116990 179169378 - GNB4 ENSG00000114450.5 179169378 0.79 0.9 4295 96834
Expression level of Genes
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miRNAs possibly regulated by vista43317[chr3:179165833-179166212]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results