EnhancerDB
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  3. vista43347[chr3:180590296-180590653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43347[chr3:180590296-180590653]
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Tissue distribution of vista43347
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Transcription factor that possibly regulate vista43347[chr3:180590296-180590653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 180590335 180590339 ESR1 TRANSFAC yes 71094281
chr3 180590335 180590346 USF1 JASPAR yes 71094282
chr3 180590335 180590346 USF2 JASPAR yes 71094283
chr3 180590336 180590343 USF2 TRANSFAC yes 71094284
chr3 180590336 180590346 SREBF2 JASPAR yes 71094285
chr3 180590338 180590343 USF2 TRANSFAC yes 71094286
chr3 180590356 180590364 SP1 TRANSFAC yes 71094287
chr3 180590371 180590383 YY1 JASPAR yes 71094288
chr3 180590386 180590390 NFE TRANSFAC yes 71094289
chr3 180590392 180590407 MEF2C JASPAR yes 71094290
chr3 180590393 180590408 MEF2A JASPAR yes 71094291
chr3 180590394 180590406 MEF2A JASPAR yes 71094292
chr3 180590394 180590406 MEF2B JASPAR yes 71094293
chr3 180590394 180590406 MEF2D JASPAR yes 71094294
chr3 180590400 180590415 MEF2C JASPAR yes 71094295
chr3 180590401 180590416 MEF2A JASPAR yes 71094296
chr3 180590410 180590422 ELF1 JASPAR yes 71094297
chr3 180590410 180590423 ELF3 JASPAR yes 71094298
chr3 180590411 180590422 SPDEF JASPAR yes 71094299
chr3 180590412 180590421 ELK4 JASPAR yes 71094300
chr3 180590412 180590422 ELK1 JASPAR yes 71094301
chr3 180590412 180590422 ELK3 JASPAR yes 71094302
chr3 180590412 180590422 ERF JASPAR yes 71094303
chr3 180590412 180590422 ERG JASPAR yes 71094304
chr3 180590412 180590422 ETS1 JASPAR yes 71094305
chr3 180590412 180590422 ETV1 JASPAR yes 71094306
chr3 180590412 180590422 ETV3 JASPAR yes 71094307
chr3 180590412 180590422 ETV4 JASPAR yes 71094308
chr3 180590412 180590422 ETV5 JASPAR yes 71094309
chr3 180590412 180590422 FEV JASPAR yes 71094310
chr3 180590412 180590422 FLI1 JASPAR yes 71094311
chr3 180590412 180590423 FLI1 JASPAR yes 71094312
chr3 180590426 180590443 BCL6B JASPAR yes 71094313
chr3 180590427 180590435 TEAD3 JASPAR yes 71094314
chr3 180590427 180590442 STAT1 JASPAR yes 71094315
chr3 180590429 180590440 STAT1 JASPAR yes 71094316
chr3 180590484 180590494 SP1 JASPAR yes 71094317
chr3 180590485 180590495 SP1 JASPAR yes 71094318
chr3 180590494 180590504 RUNX3 JASPAR yes 71094319
chr3 180590495 180590504 RUNX2 JASPAR yes 71094320
chr3 180590506 180590518 YY1 JASPAR yes 71094321
chr3 180590509 180590515 YY1 JASPAR yes 71094322
chr3 180590533 180590537 LFA1 TRANSFAC yes 71094323
chr3 180590535 180590556 IRF1 JASPAR yes 71094324
chr3 180590537 180590552 IRF9 JASPAR yes 71094325
chr3 180590538 180590552 IRF8 JASPAR yes 71094326
chr3 180590539 180590553 STAT1 JASPAR yes 71094327
chr3 180590539 180590557 IRF2 JASPAR yes 71094328
chr3 180590560 180590581 IRF1 JASPAR yes 71094329
chr3 180590560 180590581 ZNF263 JASPAR yes 71094330
chr3 180590562 180590583 IRF1 JASPAR yes 71094331
chr3 180590563 180590584 ZNF263 JASPAR yes 71094332
chr3 180590564 180590585 ZNF263 JASPAR yes 71094333
chr3 180590566 180590587 IRF1 JASPAR yes 71094334
chr3 180590567 180590588 ZNF263 JASPAR yes 71094335
chr3 180590568 180590589 IRF1 JASPAR yes 71094336
chr3 180590568 180590589 ZNF263 JASPAR yes 71094337
chr3 180590570 180590585 PRDM1 JASPAR yes 71094338
chr3 180590571 180590592 ZNF263 JASPAR yes 71094339
chr3 180590572 180590593 IRF1 JASPAR yes 71094340
chr3 180590574 180590589 PRDM1 JASPAR yes 71094341
chr3 180590575 180590596 ZNF263 JASPAR yes 71094342
chr3 180590577 180590598 ZNF263 JASPAR yes 71094343
chr3 180590578 180590593 PRDM1 JASPAR yes 71094344
chr3 180590579 180590600 ZNF263 JASPAR yes 71094345
chr3 180590581 180590602 ZNF263 JASPAR yes 71094346
chr3 180590583 180590604 ZNF263 JASPAR yes 71094347
chr3 180590584 180590605 ZNF263 JASPAR yes 71094348
chr3 180590585 180590596 E2F6 JASPAR yes 71094349
chr3 180590586 180590607 ZNF263 JASPAR yes 71094350
chr3 180590587 180590595 SP1 TRANSFAC yes 71094351
chr3 180590587 180590608 ZNF263 JASPAR yes 71094352
chr3 180590589 180590595 MAZ TRANSFAC yes 71094353
chr3 180590589 180590600 E2F6 JASPAR yes 71094354
chr3 180590590 180590611 ZNF263 JASPAR yes 71094355
chr3 180590591 180590599 SP1 TRANSFAC yes 71094356
chr3 180590591 180590612 ZNF263 JASPAR yes 71094357
chr3 180590593 180590599 MAZ TRANSFAC yes 71094358
chr3 180590593 180590604 E2F6 JASPAR yes 71094359
chr3 180590594 180590615 ZNF263 JASPAR yes 71094360
chr3 180590595 180590603 SP1 TRANSFAC yes 71094361
chr3 180590595 180590616 ZNF263 JASPAR yes 71094362
chr3 180590597 180590603 MAZ TRANSFAC yes 71094363
chr3 180590597 180590608 E2F6 JASPAR yes 71094364
chr3 180590598 180590619 ZNF263 JASPAR yes 71094365
chr3 180590599 180590607 SP1 TRANSFAC yes 71094366
chr3 180590599 180590620 ZNF263 JASPAR yes 71094367
chr3 180590601 180590607 MAZ TRANSFAC yes 71094368
chr3 180590601 180590612 E2F6 JASPAR yes 71094369
chr3 180590602 180590623 ZNF263 JASPAR yes 71094370
chr3 180590603 180590611 SP1 TRANSFAC yes 71094371
chr3 180590603 180590624 ZNF263 JASPAR yes 71094372
chr3 180590605 180590611 MAZ TRANSFAC yes 71094373
chr3 180590605 180590616 E2F6 JASPAR yes 71094374
chr3 180590606 180590627 ZNF263 JASPAR yes 71094375
chr3 180590607 180590615 SP1 TRANSFAC yes 71094376
chr3 180590607 180590628 ZNF263 JASPAR yes 71094377
chr3 180590609 180590615 MAZ TRANSFAC yes 71094378
chr3 180590609 180590620 E2F6 JASPAR yes 71094379
chr3 180590610 180590631 ZNF263 JASPAR yes 71094380
chr3 180590611 180590632 ZNF263 JASPAR yes 71094381
chr3 180590614 180590620 PEA3 TRANSFAC yes 71094382
chr3 180590614 180590635 ZNF263 JASPAR yes 71094383
chr3 180590615 180590636 ZNF263 JASPAR yes 71094384
chr3 180590618 180590639 ZNF263 JASPAR yes 71094385
chr3 180590619 180590640 ZNF263 JASPAR yes 71094386
chr3 180590622 180590643 ZNF263 JASPAR yes 71094387
chr3 180590624 180590645 ZNF263 JASPAR yes 71094388
chr3 180590626 180590647 ZNF263 JASPAR yes 71094389
chr3 180590627 180590648 ZNF263 JASPAR yes 71094390
chr3 180590630 180590651 ZNF263 JASPAR yes 71094391
chr3 180590631 180590636 ETS2 TRANSFAC yes 71094392
chr3 180590631 180590639 EHF JASPAR yes 71094393
chr3 180590635 180590640 ETS2 TRANSFAC yes 71094394
chr3 180590640 180590645 ETS2 TRANSFAC yes 71094395
chr3 180590640 180590648 EHF JASPAR yes 71094396
SNP sites on vista43347[chr3:180590296-180590653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 180590297 rs34312605 C T no 7234240
chr3 180590483 rs565459576 G A no 7234241
chr3 180590548 rs560089142 A G
IRF1 IRF2 IRF8 IRF9 STAT1
7234242
chr3 180590560 rs13074054 A G
IRF1 ZNF263
7234243
chr3 180590578 rs57196550 G A
IRF1 PRDM1 ZNF263
7234244
Genes possibly regulated by vista43347[chr3:180590296-180590653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 180320646 180588793 - CCDC39 ENSG00000145075.7 180588793 0.83 0.99 4302 98497
chr3 180585929 180700541 + FXR1 ENSG00000114416.13 180585929 0.77 1.0 4303 95633
Expression level of Genes
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miRNAs possibly regulated by vista43347[chr3:180590296-180590653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results