EnhancerDB
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  3. vista43351[chr3:181329651-181329904]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43351[chr3:181329651-181329904]
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Tissue distribution of vista43351
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Transcription factor that possibly regulate vista43351[chr3:181329651-181329904]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 181329652 181329655 MYB TRANSFAC yes 8054877
chr3 181329652 181329655 MYB TRANSFAC yes 71094547
chr3 181329672 181329676 YY1 TRANSFAC yes 8054878
chr3 181329672 181329676 YY1 TRANSFAC yes 71094548
chr3 181329701 181329719 RARA JASPAR yes 8054879
chr3 181329701 181329719 RARA JASPAR yes 71094549
chr3 181329708 181329727 CTCF JASPAR yes 8054880
chr3 181329708 181329727 CTCF JASPAR yes 71094550
chr3 181329711 181329721 MZF1 JASPAR yes 8054881
chr3 181329711 181329721 MZF1 JASPAR yes 71094551
chr3 181329714 181329720 SP1 TRANSFAC yes 8054882
chr3 181329714 181329720 SP1 TRANSFAC yes 71094552
chr3 181329731 181329735 NFE TRANSFAC yes 8054883
chr3 181329731 181329735 NFE TRANSFAC yes 71094553
chr3 181329743 181329747 TEAD2 TRANSFAC yes 8054884
chr3 181329743 181329747 TEAD2 TRANSFAC yes 71094554
chr3 181329749 181329754 MYB TRANSFAC yes 8054885
chr3 181329749 181329754 MYB TRANSFAC yes 71094555
chr3 181329781 181329791 EMX1 JASPAR yes 8054886
chr3 181329781 181329791 EMX2 JASPAR yes 8054887
chr3 181329781 181329791 EN2 JASPAR yes 8054888
chr3 181329781 181329791 EVX1 JASPAR yes 8054889
chr3 181329781 181329791 EVX2 JASPAR yes 8054890
chr3 181329781 181329791 GBX1 JASPAR yes 8054891
chr3 181329781 181329791 HOXA2 JASPAR yes 8054892
chr3 181329781 181329791 HOXB2 JASPAR yes 8054893
chr3 181329781 181329791 HOXB3 JASPAR yes 8054894
chr3 181329781 181329791 MEOX1 JASPAR yes 8054895
chr3 181329781 181329791 MEOX2 JASPAR yes 8054896
chr3 181329781 181329791 EMX1 JASPAR yes 71094556
chr3 181329781 181329791 EMX2 JASPAR yes 71094557
chr3 181329781 181329791 EN2 JASPAR yes 71094558
chr3 181329781 181329791 EVX1 JASPAR yes 71094559
chr3 181329781 181329791 EVX2 JASPAR yes 71094560
chr3 181329781 181329791 GBX1 JASPAR yes 71094561
chr3 181329781 181329791 HOXA2 JASPAR yes 71094562
chr3 181329781 181329791 HOXB2 JASPAR yes 71094563
chr3 181329781 181329791 HOXB3 JASPAR yes 71094564
chr3 181329781 181329791 MEOX1 JASPAR yes 71094565
chr3 181329781 181329791 MEOX2 JASPAR yes 71094566
chr3 181329782 181329799 BCL6B JASPAR yes 8054897
chr3 181329782 181329799 BCL6B JASPAR yes 71094567
chr3 181329791 181329797 SOX10 JASPAR yes 8054898
chr3 181329791 181329797 SOX10 JASPAR yes 71094568
chr3 181329807 181329822 FOXP1 JASPAR yes 8054899
chr3 181329807 181329822 FOXP1 JASPAR yes 71094569
chr3 181329850 181329868 NFYA JASPAR yes 8054900
chr3 181329850 181329868 NFYA JASPAR yes 71094570
chr3 181329853 181329869 NFYA JASPAR yes 8054901
chr3 181329853 181329869 NFYA JASPAR yes 71094571
chr3 181329854 181329864 HOXA13 JASPAR yes 8054902
chr3 181329854 181329864 HOXA13 JASPAR yes 71094572
chr3 181329856 181329871 NFYB JASPAR yes 8054903
chr3 181329856 181329871 NFYB JASPAR yes 71094573
chr3 181329858 181329863 NFY TRANSFAC yes 8054904
chr3 181329858 181329863 NFY TRANSFAC yes 71094574
chr3 181329896 181329903 SPI1 JASPAR yes 8054905
chr3 181329896 181329903 SPI1 JASPAR yes 71094575
SNP sites on vista43351[chr3:181329651-181329904]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 181329682 rs6443750 T C no 7234916
chr3 181329833 rs116281562 G A no 7234917
chr3 181329854 rs73061258 G A
HOXA13 NFYA
7234918
Genes possibly regulated by vista43351[chr3:181329651-181329904]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 181429714 181432221 + SOX2 ENSG00000181449.2 181429714 0.93 0.94 4305 190
Expression level of Genes
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miRNAs possibly regulated by vista43351[chr3:181329651-181329904]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results