EnhancerDB
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  3. vista43397[chr3:182962465-182962759]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43397[chr3:182962465-182962759]
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Tissue distribution of vista43397
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Transcription factor that possibly regulate vista43397[chr3:182962465-182962759]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 182962450 182962465 MEF2A JASPAR yes 8153525
chr3 182962450 182962465 MEF2A JASPAR yes 71096994
chr3 182962487 182962502 FOXA1 JASPAR yes 8153526
chr3 182962487 182962502 FOXA1 JASPAR yes 71096995
chr3 182962489 182962501 FOXC2 JASPAR yes 8153527
chr3 182962489 182962501 FOXC2 JASPAR yes 71096996
chr3 182962491 182962502 FOXA1 JASPAR yes 8153528
chr3 182962491 182962502 FOXA1 JASPAR yes 71096997
chr3 182962491 182962503 POU2F1 JASPAR yes 8153529
chr3 182962491 182962503 POU2F1 JASPAR yes 71096998
chr3 182962492 182962501 POU3F4 JASPAR yes 8153530
chr3 182962492 182962501 POU5F1B JASPAR yes 8153531
chr3 182962492 182962501 POU3F4 JASPAR yes 71096999
chr3 182962492 182962501 POU5F1B JASPAR yes 71097000
chr3 182962503 182962515 POU2F1 JASPAR yes 8153532
chr3 182962503 182962515 POU2F1 JASPAR yes 71097001
chr3 182962503 182962516 POU3F3 JASPAR yes 8153533
chr3 182962503 182962516 POU3F3 JASPAR yes 71097002
chr3 182962505 182962514 POU3F4 JASPAR yes 8153534
chr3 182962505 182962514 POU5F1B JASPAR yes 8153535
chr3 182962505 182962514 POU3F4 JASPAR yes 71097003
chr3 182962505 182962514 POU5F1B JASPAR yes 71097004
chr3 182962514 182962527 POU3F3 JASPAR yes 8153536
chr3 182962514 182962527 POU3F3 JASPAR yes 71097005
chr3 182962522 182962530 HOXA5 JASPAR yes 8153537
chr3 182962522 182962530 HOXA5 JASPAR yes 71097006
chr3 182962531 182962547 POU4F2 JASPAR yes 8153538
chr3 182962531 182962547 POU4F2 JASPAR yes 71097007
chr3 182962532 182962543 PHOX2A JASPAR yes 8153539
chr3 182962532 182962543 PHOX2A JASPAR yes 71097008
chr3 182962533 182962537 YY1 TRANSFAC yes 8153540
chr3 182962533 182962537 YY1 TRANSFAC yes 71097009
chr3 182962552 182962569 RARA JASPAR yes 8153541
chr3 182962552 182962569 RARA JASPAR yes 71097010
chr3 182962565 182962574 TFAP2A JASPAR yes 8153542
chr3 182962565 182962574 TFAP2A JASPAR yes 71097011
chr3 182962604 182962610 TCF4 TRANSFAC yes 8153543
chr3 182962604 182962610 TCF4 TRANSFAC yes 71097012
chr3 182962644 182962651 E2F1 TRANSFAC yes 8153544
chr3 182962644 182962651 E2F1 TRANSFAC yes 71097013
chr3 182962650 182962664 GLIS2 JASPAR yes 8153545
chr3 182962650 182962664 GLIS2 JASPAR yes 71097014
chr3 182962674 182962692 MAFF JASPAR yes 8153546
chr3 182962674 182962692 MAFF JASPAR yes 71097015
chr3 182962676 182962687 FOXA1 JASPAR yes 8153547
chr3 182962676 182962687 NRL JASPAR yes 8153548
chr3 182962676 182962687 FOXA1 JASPAR yes 71097016
chr3 182962676 182962687 NRL JASPAR yes 71097017
chr3 182962676 182962691 MAFK JASPAR yes 8153549
chr3 182962676 182962691 MAFK JASPAR yes 71097018
chr3 182962682 182962698 POU4F2 JASPAR yes 8153550
chr3 182962682 182962698 POU4F2 JASPAR yes 71097019
chr3 182962686 182962697 PHOX2A JASPAR yes 8153551
chr3 182962686 182962697 PHOX2A JASPAR yes 71097020
chr3 182962696 182962702 HiNF-A TRANSFAC yes 8153552
chr3 182962696 182962702 HiNF-A TRANSFAC yes 71097021
chr3 182962699 182962707 HOXA5 JASPAR yes 8153553
chr3 182962699 182962707 HOXA5 JASPAR yes 71097022
chr3 182962702 182962715 POU3F3 JASPAR yes 8153554
chr3 182962702 182962715 POU3F3 JASPAR yes 71097023
chr3 182962713 182962726 POU3F3 JASPAR yes 8153555
chr3 182962713 182962726 POU3F3 JASPAR yes 71097024
chr3 182962714 182962726 POU2F1 JASPAR yes 8153556
chr3 182962714 182962726 POU2F1 JASPAR yes 71097025
chr3 182962715 182962724 POU3F4 JASPAR yes 8153557
chr3 182962715 182962724 POU5F1B JASPAR yes 8153558
chr3 182962715 182962724 POU3F4 JASPAR yes 71097026
chr3 182962715 182962724 POU5F1B JASPAR yes 71097027
chr3 182962724 182962735 CDX2 JASPAR yes 8153559
chr3 182962724 182962735 CDX2 JASPAR yes 71097028
chr3 182962725 182962736 HOXA10 JASPAR yes 8153560
chr3 182962725 182962736 HOXA10 JASPAR yes 71097029
chr3 182962726 182962736 HOXD11 JASPAR yes 8153561
chr3 182962726 182962736 HOXD13 JASPAR yes 8153562
chr3 182962726 182962736 HOXD11 JASPAR yes 71097030
chr3 182962726 182962736 HOXD13 JASPAR yes 71097031
chr3 182962726 182962741 FOXP1 JASPAR yes 8153563
chr3 182962726 182962741 FOXP1 JASPAR yes 71097032
chr3 182962728 182962732 TEAD2 TRANSFAC yes 8153564
chr3 182962728 182962732 TEAD2 TRANSFAC yes 71097033
chr3 182962728 182962733 TBP TRANSFAC yes 8153565
chr3 182962728 182962733 TBP TRANSFAC yes 71097034
chr3 182962728 182962734 TFIID TRANSFAC yes 8153566
chr3 182962728 182962734 TFIID TRANSFAC yes 71097035
chr3 182962733 182962739 HiNF-A TRANSFAC yes 8153567
chr3 182962733 182962739 HiNF-A TRANSFAC yes 71097036
chr3 182962753 182962774 IRF1 JASPAR yes 8153568
chr3 182962753 182962774 IRF1 JASPAR yes 71097037
SNP sites on vista43397[chr3:182962465-182962759]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 182962577 rs142777299 T C no 7242539
Genes possibly regulated by vista43397[chr3:182962465-182962759]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 182840001 182881627 - LAMP3 ENSG00000078081.3 182881627 0.98 1.0 4309 19162
chr3 182971032 183016292 + B3GNT5 ENSG00000176597.7 182971032 0.91 0.99 4311 91727
Expression level of Genes
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miRNAs possibly regulated by vista43397[chr3:182962465-182962759]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results