EnhancerDB
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  3. vista43401[chr3:182978108-182978472]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43401[chr3:182978108-182978472]
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Tissue distribution of vista43401
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Transcription factor that possibly regulate vista43401[chr3:182978108-182978472]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 182978117 182978131 SPI1 JASPAR yes 8154222
chr3 182978117 182978131 SPI1 JASPAR yes 71097198
chr3 182978149 182978161 IRF1 JASPAR yes 8154223
chr3 182978149 182978161 IRF1 JASPAR yes 71097199
chr3 182978160 182978175 MEF2A JASPAR yes 8154224
chr3 182978160 182978175 MEF2A JASPAR yes 71097200
chr3 182978162 182978174 MEF2A JASPAR yes 8154225
chr3 182978162 182978174 MEF2D JASPAR yes 8154226
chr3 182978162 182978174 MEF2A JASPAR yes 71097201
chr3 182978162 182978174 MEF2D JASPAR yes 71097202
chr3 182978163 182978173 MEF2A JASPAR yes 8154227
chr3 182978163 182978173 MEF2A JASPAR yes 71097203
chr3 182978166 182978170 YY1 TRANSFAC yes 8154228
chr3 182978166 182978170 YY1 TRANSFAC yes 71097204
chr3 182978170 182978184 SPI1 JASPAR yes 8154229
chr3 182978170 182978184 SPI1 JASPAR yes 71097205
chr3 182978173 182978192 PAX5 JASPAR yes 8154230
chr3 182978173 182978192 PAX5 JASPAR yes 71097206
chr3 182978249 182978262 NR2F1 JASPAR yes 8154231
chr3 182978249 182978262 NR2F1 JASPAR yes 71097207
chr3 182978253 182978270 RARA JASPAR yes 8154232
chr3 182978253 182978270 RXRA JASPAR yes 8154233
chr3 182978253 182978270 RARA JASPAR yes 71097208
chr3 182978253 182978270 RXRA JASPAR yes 71097209
chr3 182978274 182978292 MAFF JASPAR yes 8154234
chr3 182978274 182978292 MAFF JASPAR yes 71097210
chr3 182978275 182978290 MAFK JASPAR yes 8154235
chr3 182978275 182978290 MAFK JASPAR yes 71097211
chr3 182978279 182978290 NRL JASPAR yes 8154236
chr3 182978279 182978290 NRL JASPAR yes 71097212
chr3 182978286 182978296 HOXB13 JASPAR yes 8154237
chr3 182978286 182978296 HOXB13 JASPAR yes 71097213
chr3 182978287 182978299 FOXI1 JASPAR yes 8154238
chr3 182978287 182978299 FOXI1 JASPAR yes 71097214
chr3 182978290 182978294 YY1 TRANSFAC yes 8154239
chr3 182978290 182978294 YY1 TRANSFAC yes 71097215
chr3 182978300 182978313 POU2F2 JASPAR yes 8154240
chr3 182978300 182978313 POU2F2 JASPAR yes 71097216
chr3 182978300 182978314 POU1F1 JASPAR yes 8154241
chr3 182978300 182978314 POU1F1 JASPAR yes 71097217
chr3 182978301 182978313 POU3F1 JASPAR yes 8154242
chr3 182978301 182978313 POU3F2 JASPAR yes 8154243
chr3 182978301 182978313 POU3F1 JASPAR yes 71097218
chr3 182978301 182978313 POU3F2 JASPAR yes 71097219
chr3 182978301 182978314 POU3F3 JASPAR yes 8154244
chr3 182978301 182978314 POU3F3 JASPAR yes 71097220
chr3 182978302 182978314 POU2F1 JASPAR yes 8154245
chr3 182978302 182978314 POU2F1 JASPAR yes 71097221
chr3 182978303 182978312 POU3F4 JASPAR yes 8154246
chr3 182978303 182978312 POU5F1B JASPAR yes 8154247
chr3 182978303 182978312 POU3F4 JASPAR yes 71097222
chr3 182978303 182978312 POU5F1B JASPAR yes 71097223
chr3 182978314 182978326 GRHL1 JASPAR yes 8154248
chr3 182978314 182978326 GRHL1 JASPAR yes 71097224
chr3 182978315 182978325 TFCP2 JASPAR yes 8154249
chr3 182978315 182978325 TFCP2 JASPAR yes 71097225
chr3 182978344 182978348 TEAD2 TRANSFAC yes 8154250
chr3 182978344 182978348 TEAD2 TRANSFAC yes 71097226
chr3 182978346 182978349 MYB TRANSFAC yes 8154251
chr3 182978346 182978349 MYB TRANSFAC yes 71097227
chr3 182978358 182978373 MEF2C JASPAR yes 8154252
chr3 182978358 182978373 MEF2C JASPAR yes 71097228
chr3 182978359 182978374 MEF2A JASPAR yes 8154253
chr3 182978359 182978374 MEF2A JASPAR yes 71097229
chr3 182978365 182978378 HSF1 JASPAR yes 8154254
chr3 182978365 182978378 HSF2 JASPAR yes 8154255
chr3 182978365 182978378 HSF1 JASPAR yes 71097230
chr3 182978365 182978378 HSF2 JASPAR yes 71097231
chr3 182978365 182978379 ONECUT3 JASPAR yes 8154256
chr3 182978365 182978379 ONECUT3 JASPAR yes 71097232
chr3 182978373 182978377 TEAD2 TRANSFAC yes 8154257
chr3 182978373 182978377 TEAD2 TRANSFAC yes 71097233
chr3 182978374 182978382 RHOXF1 JASPAR yes 8154258
chr3 182978374 182978382 RHOXF1 JASPAR yes 71097234
chr3 182978415 182978419 NFE TRANSFAC yes 8154259
chr3 182978415 182978419 NFE TRANSFAC yes 71097235
chr3 182978415 182978430 FOXP1 JASPAR yes 8154260
chr3 182978415 182978430 FOXP1 JASPAR yes 71097236
chr3 182978426 182978430 YY1 TRANSFAC yes 8154261
chr3 182978426 182978430 YY1 TRANSFAC yes 71097237
chr3 182978434 182978438 YY1 TRANSFAC yes 8154262
chr3 182978434 182978438 YY1 TRANSFAC yes 71097238
chr3 182978438 182978449 NFKB1 JASPAR yes 8154263
chr3 182978438 182978449 NFKB1 JASPAR yes 71097239
chr3 182978439 182978449 REL JASPAR yes 8154264
chr3 182978439 182978449 REL JASPAR yes 71097240
chr3 182978443 182978464 ZNF263 JASPAR yes 8154265
chr3 182978443 182978464 ZNF263 JASPAR yes 71097241
chr3 182978457 182978469 INSM1 JASPAR yes 8154266
chr3 182978457 182978469 INSM1 JASPAR yes 71097242
chr3 182978465 182978468 MYB TRANSFAC yes 8154267
chr3 182978465 182978468 MYB TRANSFAC yes 71097243
chr3 182978466 182978478 EHF JASPAR yes 8154268
chr3 182978466 182978478 ELF1 JASPAR yes 8154269
chr3 182978466 182978478 EHF JASPAR yes 71097244
chr3 182978466 182978478 ELF1 JASPAR yes 71097245
chr3 182978466 182978479 ELF3 JASPAR yes 8154270
chr3 182978466 182978479 ELF3 JASPAR yes 71097246
chr3 182978467 182978478 ELF5 JASPAR yes 8154271
chr3 182978467 182978478 ELF5 JASPAR yes 71097247
SNP sites on vista43401[chr3:182978108-182978472]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 182978253 rs78189343 T C
NR2F1 RARA RXRA
7242620
chr3 182978302 rs180747040 A G
POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3
7242621
chr3 182978332 rs150609425 A C no 7242622
chr3 182978408 rs138739897 C A no 7242623
Genes possibly regulated by vista43401[chr3:182978108-182978472]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 182840001 182881627 - LAMP3 ENSG00000078081.3 182881627 0.98 1.0 4309 3519
chr3 182971032 183016292 + B3GNT5 ENSG00000176597.7 182971032 0.91 0.99 4311 92924
Expression level of Genes
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miRNAs possibly regulated by vista43401[chr3:182978108-182978472]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results