EnhancerDB
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  3. vista43408[chr3:183079075-183079309]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43408[chr3:183079075-183079309]
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Tissue distribution of vista43408
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Transcription factor that possibly regulate vista43408[chr3:183079075-183079309]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 183078875 183079397 GATA1 UCSC Txn Factor no Conserved 108531231
chr3 183079023 183079282 TEAD4 UCSC Txn Factor no Conserved 108531232
chr3 183079046 183079277 TAL1 UCSC Txn Factor no Conserved 108531233
chr3 183079109 183079119 HMBOX1 JASPAR yes 8164180
chr3 183079109 183079119 HMBOX1 JASPAR yes 71097689
chr3 183079128 183079143 AR JASPAR yes 8164181
chr3 183079128 183079143 AR JASPAR yes 71097690
chr3 183079136 183079150 E2F7 JASPAR yes 8164182
chr3 183079136 183079150 E2F7 JASPAR yes 71097691
chr3 183079137 183079148 TBX20 JASPAR yes 8164183
chr3 183079137 183079148 TBX20 JASPAR yes 71097692
chr3 183079137 183079149 E2F8 JASPAR yes 8164184
chr3 183079137 183079149 E2F8 JASPAR yes 71097693
chr3 183079139 183079147 TBX15 JASPAR yes 8164185
chr3 183079139 183079147 TBX15 JASPAR yes 71097694
chr3 183079168 183079174 MZF1 JASPAR yes 8164186
chr3 183079168 183079174 MZF1 JASPAR yes 71097695
chr3 183079171 183079175 H1TF2 TRANSFAC yes 8164187
chr3 183079171 183079175 NFE TRANSFAC yes 8164188
chr3 183079171 183079175 SRF TRANSFAC yes 8164189
chr3 183079171 183079175 H1TF2 TRANSFAC yes 71097696
chr3 183079171 183079175 NFE TRANSFAC yes 71097697
chr3 183079171 183079175 SRF TRANSFAC yes 71097698
chr3 183079197 183079215 RARA JASPAR yes 8164190
chr3 183079197 183079215 RARA JASPAR yes 71097699
chr3 183079200 183079213 DUXA JASPAR yes 8164191
chr3 183079200 183079213 DUXA JASPAR yes 71097700
chr3 183079201 183079212 DUX4 JASPAR yes 8164192
chr3 183079201 183079212 PHOX2A JASPAR yes 8164193
chr3 183079201 183079212 DUX4 JASPAR yes 71097701
chr3 183079201 183079212 PHOX2A JASPAR yes 71097702
chr3 183079215 183079219 LFA1 TRANSFAC yes 8164194
chr3 183079215 183079219 LFA1 TRANSFAC yes 71097703
chr3 183079220 183079225 H4TF1 TRANSFAC yes 8164195
chr3 183079220 183079225 H4TF1 TRANSFAC yes 71097704
chr3 183079223 183079233 MZF1 JASPAR yes 8164196
chr3 183079223 183079233 MZF1 JASPAR yes 71097705
chr3 183079223 183079235 INSM1 JASPAR yes 8164197
chr3 183079223 183079235 INSM1 JASPAR yes 71097706
chr3 183079256 183079267 EBF1 JASPAR yes 8164198
chr3 183079256 183079267 EBF1 JASPAR yes 71097707
chr3 183079256 183079271 ZBTB33 JASPAR yes 8164199
chr3 183079256 183079271 ZBTB33 JASPAR yes 71097708
chr3 183079298 183079302 NFE TRANSFAC yes 8164200
chr3 183079298 183079302 NFE TRANSFAC yes 71097709
chr3 183079301 183079316 PRDM1 JASPAR yes 8164201
chr3 183079301 183079316 PRDM1 JASPAR yes 71097710
SNP sites on vista43408[chr3:183079075-183079309]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 183079112 rs572531375 T C
GATA1 HMBOX1 TAL1 TEAD4
7243585
chr3 183079113 rs7638798 A G
GATA1 HMBOX1 TAL1 TEAD4
7243586
chr3 183079198 rs141950649 G A
GATA1 RARA TAL1 TEAD4
7243587
chr3 183079296 rs145815422 C T
GATA1
7243588
Genes possibly regulated by vista43408[chr3:183079075-183079309]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 182895831 183146566 - MCF2L2 ENSG00000053524.7 183146566 0.9 1.0 4310 32743
Expression level of Genes
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miRNAs possibly regulated by vista43408[chr3:183079075-183079309]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results