EnhancerDB
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  3. vista43431[chr3:183259653-183259899]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43431[chr3:183259653-183259899]
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Tissue distribution of vista43431
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Transcription factor that possibly regulate vista43431[chr3:183259653-183259899]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 183259512 183259885 IRF1 UCSC Txn Factor no Conserved 108531251
chr3 183259655 183259660 GATA2 JASPAR yes 8179700
chr3 183259655 183259660 GATA2 JASPAR yes 71098762
chr3 183259664 183259668 LFA1 TRANSFAC yes 8179701
chr3 183259664 183259668 LFA1 TRANSFAC yes 71098763
chr3 183259675 183259693 RARA JASPAR yes 8179702
chr3 183259675 183259693 RARA JASPAR yes 71098764
chr3 183259678 183259691 DUXA JASPAR yes 8179703
chr3 183259678 183259691 DUXA JASPAR yes 71098765
chr3 183259679 183259685 GATA1 TRANSFAC yes 8179704
chr3 183259679 183259685 GATA1 TRANSFAC yes 71098766
chr3 183259679 183259687 GATA5 JASPAR yes 8179705
chr3 183259679 183259687 GATA5 JASPAR yes 71098767
chr3 183259683 183259691 NR4A2 JASPAR yes 8179706
chr3 183259683 183259691 NR4A2 JASPAR yes 71098768
chr3 183259685 183259689 ESR1 TRANSFAC yes 8179707
chr3 183259685 183259689 ESR1 TRANSFAC yes 71098769
chr3 183259686 183259696 SREBF2 JASPAR yes 8179708
chr3 183259686 183259696 SREBF2 JASPAR yes 71098770
chr3 183259690 183259711 IRF1 JASPAR yes 8179709
chr3 183259690 183259711 IRF1 JASPAR yes 71098771
chr3 183259691 183259712 ZNF263 JASPAR yes 8179710
chr3 183259691 183259712 ZNF263 JASPAR yes 71098772
chr3 183259692 183259707 PRDM1 JASPAR yes 8179711
chr3 183259692 183259707 STAT2 JASPAR yes 8179712
chr3 183259692 183259707 PRDM1 JASPAR yes 71098773
chr3 183259692 183259707 STAT2 JASPAR yes 71098774
chr3 183259693 183259707 SPIC JASPAR yes 8179713
chr3 183259693 183259707 STAT1 JASPAR yes 8179714
chr3 183259693 183259707 SPIC JASPAR yes 71098775
chr3 183259693 183259707 STAT1 JASPAR yes 71098776
chr3 183259694 183259708 IRF7 JASPAR yes 8179715
chr3 183259694 183259708 IRF8 JASPAR yes 8179716
chr3 183259694 183259708 IRF7 JASPAR yes 71098777
chr3 183259694 183259708 IRF8 JASPAR yes 71098778
chr3 183259694 183259709 IRF9 JASPAR yes 8179717
chr3 183259694 183259709 IRF9 JASPAR yes 71098779
chr3 183259695 183259713 IRF2 JASPAR yes 8179718
chr3 183259695 183259713 IRF2 JASPAR yes 71098780
chr3 183259696 183259717 IRF1 JASPAR yes 8179719
chr3 183259696 183259717 IRF1 JASPAR yes 71098781
chr3 183259698 183259713 PRDM1 JASPAR yes 8179720
chr3 183259698 183259713 STAT2 JASPAR yes 8179721
chr3 183259698 183259713 PRDM1 JASPAR yes 71098782
chr3 183259698 183259713 STAT2 JASPAR yes 71098783
chr3 183259699 183259713 STAT1 JASPAR yes 8179722
chr3 183259699 183259713 STAT1 JASPAR yes 71098784
chr3 183259700 183259714 IRF7 JASPAR yes 8179723
chr3 183259700 183259714 IRF8 JASPAR yes 8179724
chr3 183259700 183259714 IRF7 JASPAR yes 71098785
chr3 183259700 183259714 IRF8 JASPAR yes 71098786
chr3 183259700 183259715 IRF9 JASPAR yes 8179725
chr3 183259700 183259715 IRF9 JASPAR yes 71098787
chr3 183259711 183259715 H1TF2 TRANSFAC yes 8179726
chr3 183259711 183259715 NFE TRANSFAC yes 8179727
chr3 183259711 183259715 SRF TRANSFAC yes 8179728
chr3 183259711 183259715 H1TF2 TRANSFAC yes 71098788
chr3 183259711 183259715 NFE TRANSFAC yes 71098789
chr3 183259711 183259715 SRF TRANSFAC yes 71098790
chr3 183259732 183259736 H4TF2 TRANSFAC yes 8179729
chr3 183259732 183259736 H4TF2 TRANSFAC yes 71098791
chr3 183259761 183259767 SOX10 JASPAR yes 8179730
chr3 183259761 183259767 SOX10 JASPAR yes 71098792
chr3 183259774 183259795 ZNF263 JASPAR yes 8179731
chr3 183259774 183259795 ZNF263 JASPAR yes 71098793
chr3 183259780 183259783 MYB TRANSFAC yes 8179732
chr3 183259780 183259783 MYB TRANSFAC yes 71098794
chr3 183259786 183259796 ETV6 JASPAR yes 8179733
chr3 183259786 183259796 ETV6 JASPAR yes 71098795
chr3 183259786 183259807 ZNF263 JASPAR yes 8179734
chr3 183259786 183259807 ZNF263 JASPAR yes 71098796
chr3 183259787 183259808 ZNF263 JASPAR yes 8179735
chr3 183259787 183259808 ZNF263 JASPAR yes 71098797
chr3 183259789 183259799 MZF1 JASPAR yes 8179736
chr3 183259789 183259799 MZF1 JASPAR yes 71098798
chr3 183259789 183259801 INSM1 JASPAR yes 8179737
chr3 183259789 183259801 INSM1 JASPAR yes 71098799
chr3 183259810 183259814 LFA1 TRANSFAC yes 8179738
chr3 183259810 183259814 LFA1 TRANSFAC yes 71098800
chr3 183259841 183259856 ESR2 JASPAR yes 8179739
chr3 183259841 183259856 ESR2 JASPAR yes 71098801
chr3 183259841 183259861 ESR1 JASPAR yes 8179740
chr3 183259841 183259861 ESR1 JASPAR yes 71098802
chr3 183259842 183259846 H4TF2 TRANSFAC yes 8179741
chr3 183259842 183259846 H4TF2 TRANSFAC yes 71098803
chr3 183259850 183259863 TFAP2A JASPAR yes 8179742
chr3 183259850 183259863 TFAP2B JASPAR yes 8179743
chr3 183259850 183259863 TFAP2C JASPAR yes 8179744
chr3 183259850 183259863 TFAP2A JASPAR yes 71098804
chr3 183259850 183259863 TFAP2B JASPAR yes 71098805
chr3 183259850 183259863 TFAP2C JASPAR yes 71098806
chr3 183259856 183259875 REST JASPAR yes 8179745
chr3 183259856 183259875 REST JASPAR yes 71098807
chr3 183259869 183259876 PEA3 TRANSFAC yes 8179746
chr3 183259869 183259876 PEA3 TRANSFAC yes 71098808
chr3 183259893 183259905 E2F8 JASPAR yes 8179747
chr3 183259893 183259905 E2F8 JASPAR yes 71098809
chr3 183259897 183259903 MZF1 JASPAR yes 8179748
chr3 183259897 183259903 MZF1 JASPAR yes 71098810
SNP sites on vista43431[chr3:183259653-183259899]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 183259654 rs78929888 C T
IRF1
7245277
chr3 183259677 rs150662804 G A,T
IRF1 RARA
7245278
chr3 183259848 rs75907204 G A
ESR1 ESR2 IRF1
7245279
chr3 183259865 rs6800237 T A,G
IRF1 REST
7245280
Genes possibly regulated by vista43431[chr3:183259653-183259899]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 183205319 183273477 - KLHL6 ENSG00000172578.7 183273477 0.88 0.98 4312 86422
chr3 183353356 183402265 + KLHL24 ENSG00000114796.11 183353356 0.86 0.99 4313 6543
Expression level of Genes
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miRNAs possibly regulated by vista43431[chr3:183259653-183259899]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results