EnhancerDB
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  3. vista43480[chr3:186239156-186239478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43480[chr3:186239156-186239478]
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Tissue distribution of vista43480
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Transcription factor that possibly regulate vista43480[chr3:186239156-186239478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186239161 186239526 RUNX3 UCSC Txn Factor no Conserved 108531277
chr3 186239193 186239517 EBF1 UCSC Txn Factor no Conserved 108531278
chr3 186239155 186239169 PLAG1 JASPAR yes 8341371
chr3 186239155 186239169 PLAG1 JASPAR yes 71100653
chr3 186239156 186239167 EBF1 JASPAR yes 8341372
chr3 186239156 186239167 EBF1 JASPAR yes 71100654
chr3 186239171 186239192 ZNF263 JASPAR yes 8341373
chr3 186239171 186239192 ZNF263 JASPAR yes 71100655
chr3 186239183 186239198 TFAP2C JASPAR yes 8341374
chr3 186239183 186239198 TFAP2C JASPAR yes 71100656
chr3 186239186 186239197 EBF1 JASPAR yes 8341375
chr3 186239186 186239197 EBF1 JASPAR yes 71100657
chr3 186239193 186239197 LFA1 TRANSFAC yes 8341376
chr3 186239193 186239197 LFA1 TRANSFAC yes 71100658
chr3 186239217 186239223 SOX10 JASPAR yes 8341377
chr3 186239217 186239223 SOX10 JASPAR yes 71100659
chr3 186239237 186239246 HIC2 JASPAR yes 8341378
chr3 186239237 186239246 HIC2 JASPAR yes 71100660
chr3 186239269 186239275 SOX10 JASPAR yes 8341379
chr3 186239269 186239275 SOX10 JASPAR yes 71100661
chr3 186239275 186239287 GLI2 JASPAR yes 8341380
chr3 186239275 186239287 GLI2 JASPAR yes 71100662
chr3 186239281 186239285 H4TF2 TRANSFAC yes 8341381
chr3 186239281 186239285 H4TF2 TRANSFAC yes 71100663
chr3 186239293 186239302 THAP1 JASPAR yes 8341382
chr3 186239293 186239302 THAP1 JASPAR yes 71100664
chr3 186239296 186239300 LFA1 TRANSFAC yes 8341383
chr3 186239296 186239300 LFA1 TRANSFAC yes 71100665
chr3 186239300 186239312 TFAP2A JASPAR yes 8341384
chr3 186239300 186239312 TFAP2B JASPAR yes 8341385
chr3 186239300 186239312 TFAP2C JASPAR yes 8341386
chr3 186239300 186239312 TFAP2A JASPAR yes 71100666
chr3 186239300 186239312 TFAP2B JASPAR yes 71100667
chr3 186239300 186239312 TFAP2C JASPAR yes 71100668
chr3 186239300 186239315 TFAP2A JASPAR yes 8341387
chr3 186239300 186239315 TFAP2C JASPAR yes 8341388
chr3 186239300 186239315 TFAP2A JASPAR yes 71100669
chr3 186239300 186239315 TFAP2C JASPAR yes 71100670
chr3 186239301 186239310 TFAP2A JASPAR yes 8341389
chr3 186239301 186239310 TFAP2A JASPAR yes 71100671
chr3 186239301 186239312 EBF1 JASPAR yes 8341390
chr3 186239301 186239312 EBF1 JASPAR yes 71100672
chr3 186239321 186239324 MYB TRANSFAC yes 8341391
chr3 186239321 186239324 MYB TRANSFAC yes 71100673
chr3 186239334 186239337 MYB TRANSFAC yes 8341392
chr3 186239334 186239337 MYB TRANSFAC yes 71100674
chr3 186239349 186239363 EBF1 JASPAR yes 8341393
chr3 186239349 186239363 EBF1 JASPAR yes 71100675
chr3 186239352 186239361 TFAP2A JASPAR yes 8341394
chr3 186239352 186239361 TFAP2A JASPAR yes 71100676
chr3 186239356 186239361 SP1 TRANSFAC yes 8341395
chr3 186239356 186239361 SP1 TRANSFAC yes 71100677
chr3 186239364 186239379 STAT1 JASPAR yes 8341396
chr3 186239364 186239379 STAT1 JASPAR yes 71100678
chr3 186239366 186239377 STAT1 JASPAR yes 8341397
chr3 186239366 186239377 STAT3 JASPAR yes 8341398
chr3 186239366 186239377 STAT1 JASPAR yes 71100679
chr3 186239366 186239377 STAT3 JASPAR yes 71100680
chr3 186239367 186239375 STAT6 TRANSFAC yes 8341399
chr3 186239367 186239375 STAT6 TRANSFAC yes 71100681
chr3 186239368 186239383 FOXP1 JASPAR yes 8341400
chr3 186239368 186239383 FOXP1 JASPAR yes 71100682
chr3 186239371 186239382 FOXP2 JASPAR yes 8341401
chr3 186239371 186239382 FOXP2 JASPAR yes 71100683
chr3 186239372 186239380 FOXO3 JASPAR yes 8341402
chr3 186239372 186239380 FOXO3 JASPAR yes 71100684
chr3 186239388 186239399 TBX20 JASPAR yes 8341403
chr3 186239388 186239399 TBX2 JASPAR yes 8341404
chr3 186239388 186239399 TBX20 JASPAR yes 71100685
chr3 186239388 186239399 TBX2 JASPAR yes 71100686
chr3 186239388 186239401 EOMES JASPAR yes 8341405
chr3 186239388 186239401 EOMES JASPAR yes 71100687
chr3 186239389 186239399 TBR1 JASPAR yes 8341406
chr3 186239389 186239399 TBR1 JASPAR yes 71100688
chr3 186239393 186239407 IRF8 JASPAR yes 8341407
chr3 186239393 186239407 IRF8 JASPAR yes 71100689
chr3 186239395 186239407 IRF1 JASPAR yes 8341408
chr3 186239395 186239407 IRF1 JASPAR yes 71100690
chr3 186239396 186239417 IRF1 JASPAR yes 8341409
chr3 186239396 186239417 IRF1 JASPAR yes 71100691
chr3 186239398 186239413 IRF9 JASPAR yes 8341410
chr3 186239398 186239413 IRF9 JASPAR yes 71100692
chr3 186239401 186239413 IRF1 JASPAR yes 8341411
chr3 186239401 186239413 IRF1 JASPAR yes 71100693
chr3 186239411 186239426 PRDM1 JASPAR yes 8341412
chr3 186239411 186239426 PRDM1 JASPAR yes 71100694
chr3 186239435 186239450 HNF4A JASPAR yes 8341413
chr3 186239435 186239450 HNF4A JASPAR yes 71100695
chr3 186239468 186239480 NHLH1 JASPAR yes 8341414
chr3 186239468 186239480 NHLH1 JASPAR yes 71100696
chr3 186239469 186239478 SNAI2 JASPAR yes 8341415
chr3 186239469 186239478 SNAI2 JASPAR yes 71100697
chr3 186239469 186239479 ID4 JASPAR yes 8341416
chr3 186239469 186239479 NHLH1 JASPAR yes 8341417
chr3 186239469 186239479 TCF3 JASPAR yes 8341418
chr3 186239469 186239479 TCF4 JASPAR yes 8341419
chr3 186239469 186239479 ID4 JASPAR yes 71100698
chr3 186239469 186239479 NHLH1 JASPAR yes 71100699
chr3 186239469 186239479 TCF3 JASPAR yes 71100700
chr3 186239469 186239479 TCF4 JASPAR yes 71100701
chr3 186239470 186239485 RFX5 JASPAR yes 8341420
chr3 186239470 186239485 RFX5 JASPAR yes 71100702
SNP sites on vista43480[chr3:186239156-186239478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186239266 rs532158776 T C
EBF1 RUNX3
7260873
chr3 186239372 rs78372427 G A
EBF1 FOXO3 FOXP1 FOXP2 RUNX3 STAT1 STAT3 STAT6
7260874
chr3 186239429 rs114670944 G A,C
EBF1 RUNX3
7260875
chr3 186239463 rs73887928 T C
EBF1 RUNX3
7260876
Genes possibly regulated by vista43480[chr3:186239156-186239478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186256230 186264491 - CRYGS ENSG00000213139.3 186264491 0.71 1.0 4351 74987
chr3 186263862 186288332 - TBCCD1 ENSG00000113838.8 186288332 0.64 0.99 4352 51146
chr3 186285192 186315061 + DNAJB11 ENSG00000090520.6 186285192 0.62 0.99 4353 54286
chr3 186330712 186339107 + AHSG ENSG00000145192.8 186330712 1.0 1.0 4354 8766
Expression level of Genes
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miRNAs possibly regulated by vista43480[chr3:186239156-186239478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results