EnhancerDB
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  3. vista43487[chr3:186715660-186715959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43487[chr3:186715660-186715959]
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Tissue distribution of vista43487
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Transcription factor that possibly regulate vista43487[chr3:186715660-186715959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186715657 186715676 CTCF JASPAR yes 8369879
chr3 186715657 186715676 CTCF JASPAR yes 71100910
chr3 186715662 186715666 NFE TRANSFAC yes 8369880
chr3 186715662 186715666 NFE TRANSFAC yes 71100911
chr3 186715662 186715667 GATA1 TRANSFAC yes 8369881
chr3 186715662 186715667 GATA1 TRANSFAC yes 71100912
chr3 186715662 186715668 GATA3 JASPAR yes 8369882
chr3 186715662 186715668 GATA3 JASPAR yes 71100913
chr3 186715667 186715688 IRF1 JASPAR yes 8369883
chr3 186715667 186715688 IRF1 JASPAR yes 71100914
chr3 186715668 186715678 NFATC3 JASPAR yes 8369884
chr3 186715668 186715678 NFATC3 JASPAR yes 71100915
chr3 186715669 186715684 IRF9 JASPAR yes 8369885
chr3 186715669 186715684 IRF9 JASPAR yes 71100916
chr3 186715671 186715685 STAT1 JASPAR yes 8369886
chr3 186715671 186715685 STAT1 JASPAR yes 71100917
chr3 186715671 186715686 PRDM1 JASPAR yes 8369887
chr3 186715671 186715686 STAT2 JASPAR yes 8369888
chr3 186715671 186715686 PRDM1 JASPAR yes 71100918
chr3 186715671 186715686 STAT2 JASPAR yes 71100919
chr3 186715671 186715689 IRF2 JASPAR yes 8369889
chr3 186715671 186715689 IRF2 JASPAR yes 71100920
chr3 186715684 186715697 SCRT2 JASPAR yes 8369890
chr3 186715684 186715697 SCRT2 JASPAR yes 71100921
chr3 186715684 186715699 SCRT1 JASPAR yes 8369891
chr3 186715684 186715699 SCRT1 JASPAR yes 71100922
chr3 186715731 186715747 POU4F2 JASPAR yes 8369892
chr3 186715731 186715747 POU4F3 JASPAR yes 8369893
chr3 186715731 186715747 POU4F2 JASPAR yes 71100923
chr3 186715731 186715747 POU4F3 JASPAR yes 71100924
chr3 186715732 186715742 HOXA13 JASPAR yes 8369894
chr3 186715732 186715742 HOXA13 JASPAR yes 71100925
chr3 186715733 186715737 YY1 TRANSFAC yes 8369895
chr3 186715733 186715737 YY1 TRANSFAC yes 71100926
chr3 186715733 186715747 POU4F1 JASPAR yes 8369896
chr3 186715733 186715747 POU4F1 JASPAR yes 71100927
chr3 186715736 186715742 TBP TRANSFAC yes 8369897
chr3 186715736 186715742 TBP TRANSFAC yes 71100928
chr3 186715753 186715762 HIC2 JASPAR yes 8369898
chr3 186715753 186715762 HIC2 JASPAR yes 71100929
chr3 186715756 186715760 LFA1 TRANSFAC yes 8369899
chr3 186715756 186715760 LFA1 TRANSFAC yes 71100930
chr3 186715764 186715776 HES7 JASPAR yes 8369900
chr3 186715764 186715776 HES7 JASPAR yes 71100931
chr3 186715775 186715779 TEAD2 TRANSFAC yes 8369901
chr3 186715775 186715779 TEAD2 TRANSFAC yes 71100932
chr3 186715781 186715802 REST JASPAR yes 8369902
chr3 186715781 186715802 REST JASPAR yes 71100933
chr3 186715791 186715812 ZNF263 JASPAR yes 8369903
chr3 186715791 186715812 ZNF263 JASPAR yes 71100934
chr3 186715792 186715797 ETS2 TRANSFAC yes 8369904
chr3 186715792 186715797 ETS2 TRANSFAC yes 71100935
chr3 186715843 186715847 LFA1 TRANSFAC yes 8369905
chr3 186715843 186715847 LFA1 TRANSFAC yes 71100936
chr3 186715853 186715857 NFE TRANSFAC yes 8369906
chr3 186715853 186715857 NFE TRANSFAC yes 71100937
chr3 186715859 186715868 SOX9 JASPAR yes 8369907
chr3 186715859 186715868 SOX9 JASPAR yes 71100938
chr3 186715861 186715870 SRY JASPAR yes 8369908
chr3 186715861 186715870 SRY JASPAR yes 71100939
chr3 186715862 186715877 MEF2A JASPAR yes 8369909
chr3 186715862 186715877 MEF2A JASPAR yes 71100940
chr3 186715863 186715878 MEF2C JASPAR yes 8369910
chr3 186715863 186715878 MEF2C JASPAR yes 71100941
chr3 186715864 186715876 MEF2A JASPAR yes 8369911
chr3 186715864 186715876 MEF2B JASPAR yes 8369912
chr3 186715864 186715876 MEF2D JASPAR yes 8369913
chr3 186715864 186715876 MEF2A JASPAR yes 71100942
chr3 186715864 186715876 MEF2B JASPAR yes 71100943
chr3 186715864 186715876 MEF2D JASPAR yes 71100944
chr3 186715865 186715875 MEF2A JASPAR yes 8369914
chr3 186715865 186715875 MEF2A JASPAR yes 71100945
chr3 186715865 186715876 FOXC1 JASPAR yes 8369915
chr3 186715865 186715876 FOXC1 JASPAR yes 71100946
chr3 186715866 186715870 YY1 TRANSFAC yes 8369916
chr3 186715866 186715870 YY1 TRANSFAC yes 71100947
chr3 186715872 186715876 TEAD2 TRANSFAC yes 8369917
chr3 186715872 186715876 TEAD2 TRANSFAC yes 71100948
chr3 186715872 186715877 TBP TRANSFAC yes 8369918
chr3 186715872 186715877 TBP TRANSFAC yes 71100949
chr3 186715872 186715878 TFIID TRANSFAC yes 8369919
chr3 186715872 186715878 TFIID TRANSFAC yes 71100950
chr3 186715874 186715889 SOX21 JASPAR yes 8369920
chr3 186715874 186715889 SOX21 JASPAR yes 71100951
chr3 186715876 186715887 PHOX2A JASPAR yes 8369921
chr3 186715876 186715887 PROP1 JASPAR yes 8369922
chr3 186715876 186715887 PHOX2A JASPAR yes 71100952
chr3 186715876 186715887 PROP1 JASPAR yes 71100953
chr3 186715879 186715889 GSX2 JASPAR yes 8369923
chr3 186715879 186715889 MNX1 JASPAR yes 8369924
chr3 186715879 186715889 GSX2 JASPAR yes 71100954
chr3 186715879 186715889 MNX1 JASPAR yes 71100955
chr3 186715880 186715888 BARX1 JASPAR yes 8369925
chr3 186715880 186715888 BARX1 JASPAR yes 71100956
chr3 186715880 186715889 VENTX JASPAR yes 8369926
chr3 186715880 186715889 VENTX JASPAR yes 71100957
chr3 186715881 186715891 PAX3 JASPAR yes 8369927
chr3 186715881 186715891 PAX7 JASPAR yes 8369928
chr3 186715881 186715891 PAX3 JASPAR yes 71100958
chr3 186715881 186715891 PAX7 JASPAR yes 71100959
chr3 186715883 186715892 SRY JASPAR yes 8369929
chr3 186715883 186715892 SRY JASPAR yes 71100960
chr3 186715889 186715895 TBP TRANSFAC yes 8369930
chr3 186715889 186715895 TBP TRANSFAC yes 71100961
chr3 186715893 186715907 SPI1 JASPAR yes 8369931
chr3 186715893 186715907 SPIC JASPAR yes 8369932
chr3 186715893 186715907 SPI1 JASPAR yes 71100962
chr3 186715893 186715907 SPIC JASPAR yes 71100963
chr3 186715895 186715907 ELF4 JASPAR yes 8369933
chr3 186715895 186715907 ELF4 JASPAR yes 71100964
chr3 186715895 186715916 IRF1 JASPAR yes 8369934
chr3 186715895 186715916 IRF1 JASPAR yes 71100965
chr3 186715897 186715907 ERF JASPAR yes 8369935
chr3 186715897 186715907 ERF JASPAR yes 71100966
chr3 186715899 186715904 ETS2 TRANSFAC yes 8369936
chr3 186715899 186715904 ETS2 TRANSFAC yes 71100967
chr3 186715899 186715914 FOXP1 JASPAR yes 8369937
chr3 186715899 186715914 FOXP1 JASPAR yes 71100968
chr3 186715900 186715921 IRF1 JASPAR yes 8369938
chr3 186715900 186715921 IRF1 JASPAR yes 71100969
chr3 186715904 186715918 STAT1 JASPAR yes 8369939
chr3 186715904 186715918 STAT1 JASPAR yes 71100970
chr3 186715904 186715919 STAT2 JASPAR yes 8369940
chr3 186715904 186715919 STAT2 JASPAR yes 71100971
chr3 186715916 186715927 DUX4 JASPAR yes 8369941
chr3 186715916 186715927 DUX4 JASPAR yes 71100972
chr3 186715921 186715931 PAX3 JASPAR yes 8369942
chr3 186715921 186715931 PAX7 JASPAR yes 8369943
chr3 186715921 186715931 PAX3 JASPAR yes 71100973
chr3 186715921 186715931 PAX7 JASPAR yes 71100974
chr3 186715921 186715932 PHOX2A JASPAR yes 8369944
chr3 186715921 186715932 PROP1 JASPAR yes 8369945
chr3 186715921 186715932 PHOX2A JASPAR yes 71100975
chr3 186715921 186715932 PROP1 JASPAR yes 71100976
chr3 186715959 186715963 LFA1 TRANSFAC yes 8369946
chr3 186715959 186715963 LFA1 TRANSFAC yes 71100977
SNP sites on vista43487[chr3:186715660-186715959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186715842 rs74618283 C T no 7264137
chr3 186715887 rs3868902 G T
BARX1 GSX2 MNX1 PAX3 PAX7 PHOX2A PROP1 SOX21 SRY VENTX
7264138
Genes possibly regulated by vista43487[chr3:186715660-186715959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186648274 186796341 + ST6GAL1 ENSG00000073849.10 186648274 0.91 0.98 4361 32614
Expression level of Genes
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miRNAs possibly regulated by vista43487[chr3:186715660-186715959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results