EnhancerDB
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  3. vista43489[chr3:186745346-186745889]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43489[chr3:186745346-186745889]
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Tissue distribution of vista43489
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Transcription factor that possibly regulate vista43489[chr3:186745346-186745889]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186745382 186745694 RUNX3 UCSC Txn Factor no Conserved 108531298
chr3 186745335 186745349 GATA2 JASPAR yes 8373187
chr3 186745335 186745349 GATA2 JASPAR yes 71100990
chr3 186745343 186745358 FOXA1 JASPAR yes 8373190
chr3 186745343 186745358 FOXA1 JASPAR yes 71100991
chr3 186745357 186745373 SOX4 JASPAR yes 8373191
chr3 186745357 186745373 SOX4 JASPAR yes 71100992
chr3 186745383 186745404 ZNF263 JASPAR yes 8373192
chr3 186745383 186745404 ZNF263 JASPAR yes 71100993
chr3 186745386 186745407 ZNF263 JASPAR yes 8373193
chr3 186745386 186745407 ZNF263 JASPAR yes 71100994
chr3 186745421 186745427 TCF1 TRANSFAC yes 8373194
chr3 186745421 186745427 TCF1 TRANSFAC yes 71100995
chr3 186745430 186745435 ETS2 TRANSFAC yes 8373195
chr3 186745430 186745435 ETS2 TRANSFAC yes 71100996
chr3 186745464 186745470 ETS1 JASPAR yes 8373196
chr3 186745464 186745470 ETS1 JASPAR yes 71100997
chr3 186745478 186745487 NKX2-8 JASPAR yes 8373197
chr3 186745478 186745487 NKX2-8 JASPAR yes 71100998
chr3 186745484 186745496 FOXI1 JASPAR yes 8373198
chr3 186745484 186745496 FOXI1 JASPAR yes 71100999
chr3 186745487 186745499 GRHL1 JASPAR yes 8373199
chr3 186745487 186745499 GRHL1 JASPAR yes 71101000
chr3 186745489 186745499 MSC JASPAR yes 8373200
chr3 186745489 186745499 MSC JASPAR yes 71101001
chr3 186745498 186745505 JUN TRANSFAC yes 8373201
chr3 186745498 186745505 JUN TRANSFAC yes 71101002
chr3 186745505 186745520 ZIC3 JASPAR yes 8373202
chr3 186745505 186745520 ZIC4 JASPAR yes 8373203
chr3 186745505 186745520 ZIC3 JASPAR yes 71101003
chr3 186745505 186745520 ZIC4 JASPAR yes 71101004
chr3 186745506 186745520 ZIC1 JASPAR yes 8373204
chr3 186745506 186745520 ZIC1 JASPAR yes 71101005
chr3 186745513 186745523 SP1 JASPAR yes 8373205
chr3 186745513 186745523 SP1 JASPAR yes 71101006
chr3 186745513 186745534 ZNF263 JASPAR yes 8373206
chr3 186745513 186745534 ZNF263 JASPAR yes 71101007
chr3 186745514 186745524 SP1 JASPAR yes 8373207
chr3 186745514 186745524 SP1 JASPAR yes 71101008
chr3 186745535 186745544 RUNX2 JASPAR yes 8373208
chr3 186745535 186745544 RUNX2 JASPAR yes 71101009
chr3 186745535 186745545 RUNX3 JASPAR yes 8373209
chr3 186745535 186745545 RUNX3 JASPAR yes 71101010
chr3 186745564 186745572 FOXC1 JASPAR yes 8373210
chr3 186745564 186745572 FOXC1 JASPAR yes 71101011
chr3 186745573 186745588 PRDM1 JASPAR yes 8373211
chr3 186745573 186745588 PRDM1 JASPAR yes 71101012
chr3 186745583 186745600 RARA JASPAR yes 8373212
chr3 186745583 186745600 RARA JASPAR yes 71101013
chr3 186745584 186745588 LFA1 TRANSFAC yes 8373213
chr3 186745584 186745588 LFA1 TRANSFAC yes 71101014
chr3 186745593 186745613 TP53 JASPAR yes 8373214
chr3 186745593 186745613 TP53 JASPAR yes 71101015
chr3 186745595 186745599 LFA1 TRANSFAC yes 8373215
chr3 186745595 186745599 LFA1 TRANSFAC yes 71101016
chr3 186745598 186745602 YY1 TRANSFAC yes 8373216
chr3 186745598 186745602 YY1 TRANSFAC yes 71101017
chr3 186745609 186745623 RORA JASPAR yes 8373217
chr3 186745609 186745623 RORA JASPAR yes 71101018
chr3 186745617 186745621 LFA1 TRANSFAC yes 8373218
chr3 186745617 186745621 LFA1 TRANSFAC yes 71101019
chr3 186745642 186745661 PAX5 JASPAR yes 8373219
chr3 186745642 186745661 PAX5 JASPAR yes 71101020
chr3 186745655 186745659 YY1 TRANSFAC yes 8373220
chr3 186745655 186745659 YY1 TRANSFAC yes 71101021
chr3 186745687 186745702 IRF9 JASPAR yes 8373221
chr3 186745687 186745702 IRF9 JASPAR yes 71101022
chr3 186745724 186745729 ETS2 TRANSFAC yes 8373222
chr3 186745724 186745729 ETS2 TRANSFAC yes 71101023
chr3 186745725 186745739 SPI1 JASPAR yes 8373223
chr3 186745725 186745739 SPIC JASPAR yes 8373224
chr3 186745725 186745739 SPI1 JASPAR yes 71101024
chr3 186745725 186745739 SPIC JASPAR yes 71101025
chr3 186745725 186745740 STAT2 JASPAR yes 8373225
chr3 186745725 186745740 STAT2 JASPAR yes 71101026
chr3 186745726 186745739 ELF1 JASPAR yes 8373226
chr3 186745726 186745739 ELF1 JASPAR yes 71101027
chr3 186745728 186745739 ELF5 JASPAR yes 8373227
chr3 186745728 186745739 ELF5 JASPAR yes 71101028
chr3 186745729 186745736 SPIB JASPAR yes 8373228
chr3 186745729 186745736 SPIB JASPAR yes 71101029
chr3 186745729 186745739 ETV6 JASPAR yes 8373229
chr3 186745729 186745739 ETV6 JASPAR yes 71101030
chr3 186745729 186745740 FLI1 JASPAR yes 8373230
chr3 186745729 186745740 FLI1 JASPAR yes 71101031
chr3 186745730 186745738 EHF JASPAR yes 8373231
chr3 186745730 186745738 EHF JASPAR yes 71101032
chr3 186745731 186745738 SPI1 JASPAR yes 8373232
chr3 186745731 186745738 SPI1 JASPAR yes 71101033
chr3 186745736 186745755 PAX5 JASPAR yes 8373233
chr3 186745736 186745755 PAX5 JASPAR yes 71101034
chr3 186745783 186745787 YY1 TRANSFAC yes 8373234
chr3 186745783 186745787 YY1 TRANSFAC yes 71101035
chr3 186745810 186745828 ESR1 JASPAR yes 8373235
chr3 186745810 186745828 ESR2 JASPAR yes 8373236
chr3 186745810 186745828 ESR1 JASPAR yes 71101036
chr3 186745810 186745828 ESR2 JASPAR yes 71101037
chr3 186745811 186745826 ESR2 JASPAR yes 8373237
chr3 186745811 186745826 ESR2 JASPAR yes 71101038
chr3 186745812 186745816 H4TF2 TRANSFAC yes 8373238
chr3 186745812 186745816 H4TF2 TRANSFAC yes 71101039
chr3 186745837 186745854 RXRA JASPAR yes 8373239
chr3 186745837 186745854 RXRA JASPAR yes 71101040
chr3 186745849 186745854 TFAP2A TRANSFAC yes 8373240
chr3 186745849 186745854 TFAP2A TRANSFAC yes 71101041
chr3 186745849 186745855 MZF1 JASPAR yes 8373241
chr3 186745849 186745855 MZF1 JASPAR yes 71101042
chr3 186745872 186745887 PRDM1 JASPAR yes 8373242
chr3 186745872 186745887 PRDM1 JASPAR yes 71101043
chr3 186745885 186745890 ETS2 TRANSFAC yes 8373243
chr3 186745885 186745890 ETS2 TRANSFAC yes 71101044
chr3 186745889 186745895 GATA3 JASPAR yes 8373244
chr3 186745889 186745895 GATA3 JASPAR yes 71101045
SNP sites on vista43489[chr3:186745346-186745889]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186745662 rs151187366 C T
RUNX3
7264517
chr3 186745826 rs73071428 C G
ESR1 ESR2
7264518
chr3 186745849 rs74433704 A T
MZF1 RXRA TFAP2A
7264519
chr3 186745884 rs11929270 G C
PRDM1
7264520
Genes possibly regulated by vista43489[chr3:186745346-186745889]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186648274 186796341 + ST6GAL1 ENSG00000073849.10 186648274 0.91 0.98 4361 2928
Expression level of Genes
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miRNAs possibly regulated by vista43489[chr3:186745346-186745889]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results