EnhancerDB
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  3. vista43490[chr3:186746012-186746360]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43490[chr3:186746012-186746360]
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Tissue distribution of vista43490
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Transcription factor that possibly regulate vista43490[chr3:186746012-186746360]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186745995 186746016 ZNF263 JASPAR yes 8373268
chr3 186745995 186746016 ZNF263 JASPAR yes 71101046
chr3 186746019 186746023 YY1 TRANSFAC yes 8373273
chr3 186746019 186746023 YY1 TRANSFAC yes 71101047
chr3 186746026 186746040 PAX6 JASPAR yes 8373274
chr3 186746026 186746040 PAX6 JASPAR yes 71101048
chr3 186746031 186746044 SCRT2 JASPAR yes 8373275
chr3 186746031 186746044 SCRT2 JASPAR yes 71101049
chr3 186746035 186746049 RORA JASPAR yes 8373276
chr3 186746035 186746049 RORA JASPAR yes 71101050
chr3 186746036 186746045 NKX3-2 JASPAR yes 8373277
chr3 186746036 186746045 NKX3-2 JASPAR yes 71101051
chr3 186746086 186746091 ETS2 TRANSFAC yes 8373278
chr3 186746086 186746091 ETS2 TRANSFAC yes 71101052
chr3 186746091 186746097 JUN TRANSFAC yes 8373279
chr3 186746091 186746097 JUN TRANSFAC yes 71101053
chr3 186746091 186746112 IRF1 JASPAR yes 8373280
chr3 186746091 186746112 IRF1 JASPAR yes 71101054
chr3 186746093 186746108 IRF9 JASPAR yes 8373281
chr3 186746093 186746108 IRF9 JASPAR yes 71101055
chr3 186746094 186746108 IRF8 JASPAR yes 8373282
chr3 186746094 186746108 IRF8 JASPAR yes 71101056
chr3 186746103 186746112 SOX9 JASPAR yes 8373283
chr3 186746103 186746112 SOX9 JASPAR yes 71101057
chr3 186746104 186746114 MYF6 JASPAR yes 8373284
chr3 186746104 186746114 MYF6 JASPAR yes 71101058
chr3 186746112 186746125 ZBED1 JASPAR yes 8373285
chr3 186746112 186746125 ZBED1 JASPAR yes 71101059
chr3 186746113 186746117 NFE TRANSFAC yes 8373286
chr3 186746113 186746117 NFE TRANSFAC yes 71101060
chr3 186746113 186746126 ZBED1 JASPAR yes 8373287
chr3 186746113 186746126 ZBED1 JASPAR yes 71101061
chr3 186746149 186746155 MZF1 JASPAR yes 8373288
chr3 186746149 186746155 MZF1 JASPAR yes 71101062
chr3 186746161 186746176 SOX21 JASPAR yes 8373289
chr3 186746161 186746176 SOX21 JASPAR yes 71101063
chr3 186746171 186746175 NFE TRANSFAC yes 8373290
chr3 186746171 186746175 NFE TRANSFAC yes 71101064
chr3 186746176 186746191 LEF1 JASPAR yes 8373291
chr3 186746176 186746191 LEF1 JASPAR yes 71101065
chr3 186746203 186746214 DMRT3 JASPAR yes 8373292
chr3 186746203 186746214 DMRT3 JASPAR yes 71101066
chr3 186746216 186746230 POU1F1 JASPAR yes 8373293
chr3 186746216 186746230 POU1F1 JASPAR yes 71101067
chr3 186746217 186746229 POU3F1 JASPAR yes 8373294
chr3 186746217 186746229 POU3F2 JASPAR yes 8373295
chr3 186746217 186746229 POU3F1 JASPAR yes 71101068
chr3 186746217 186746229 POU3F2 JASPAR yes 71101069
chr3 186746217 186746230 POU3F3 JASPAR yes 8373296
chr3 186746217 186746230 POU3F3 JASPAR yes 71101070
chr3 186746218 186746230 POU2F1 JASPAR yes 8373297
chr3 186746218 186746230 POU2F1 JASPAR yes 71101071
chr3 186746219 186746228 POU3F4 JASPAR yes 8373298
chr3 186746219 186746228 POU5F1B JASPAR yes 8373299
chr3 186746219 186746228 POU3F4 JASPAR yes 71101072
chr3 186746219 186746228 POU5F1B JASPAR yes 71101073
chr3 186746233 186746249 SOX4 JASPAR yes 8373300
chr3 186746233 186746249 SOX4 JASPAR yes 71101074
chr3 186746234 186746249 SOX21 JASPAR yes 8373301
chr3 186746234 186746249 SOX21 JASPAR yes 71101075
chr3 186746238 186746249 NFE2L2 JASPAR yes 8373302
chr3 186746238 186746249 NFE2L2 JASPAR yes 71101076
chr3 186746240 186746256 SOX8 JASPAR yes 8373303
chr3 186746240 186746256 SOX8 JASPAR yes 71101077
chr3 186746242 186746255 ATF4 JASPAR yes 8373304
chr3 186746242 186746255 ATF4 JASPAR yes 71101078
chr3 186746247 186746251 YY1 TRANSFAC yes 8373305
chr3 186746247 186746251 YY1 TRANSFAC yes 71101079
chr3 186746248 186746260 FOXC2 JASPAR yes 8373306
chr3 186746248 186746260 FOXC2 JASPAR yes 71101080
chr3 186746248 186746261 POU2F2 JASPAR yes 8373307
chr3 186746248 186746261 POU2F2 JASPAR yes 71101081
chr3 186746248 186746262 POU1F1 JASPAR yes 8373308
chr3 186746248 186746262 POU1F1 JASPAR yes 71101082
chr3 186746249 186746260 FOXB1 JASPAR yes 8373309
chr3 186746249 186746260 FOXC1 JASPAR yes 8373310
chr3 186746249 186746260 FOXB1 JASPAR yes 71101083
chr3 186746249 186746260 FOXC1 JASPAR yes 71101084
chr3 186746249 186746261 POU3F1 JASPAR yes 8373311
chr3 186746249 186746261 POU3F2 JASPAR yes 8373312
chr3 186746249 186746261 POU3F1 JASPAR yes 71101085
chr3 186746249 186746261 POU3F2 JASPAR yes 71101086
chr3 186746249 186746262 POU3F3 JASPAR yes 8373313
chr3 186746249 186746262 POU3F3 JASPAR yes 71101087
chr3 186746250 186746254 YY1 TRANSFAC yes 8373314
chr3 186746250 186746254 YY1 TRANSFAC yes 71101088
chr3 186746250 186746262 POU2F1 JASPAR yes 8373315
chr3 186746250 186746262 POU2F1 JASPAR yes 71101089
chr3 186746254 186746269 FOXA1 JASPAR yes 8373316
chr3 186746254 186746269 FOXA1 JASPAR yes 71101090
chr3 186746256 186746274 MAFF JASPAR yes 8373317
chr3 186746256 186746274 MAFF JASPAR yes 71101091
chr3 186746258 186746262 YY1 TRANSFAC yes 8373318
chr3 186746258 186746262 YY1 TRANSFAC yes 71101092
chr3 186746258 186746273 MAFK JASPAR yes 8373319
chr3 186746258 186746273 MAFK JASPAR yes 71101093
chr3 186746269 186746281 MEF2D JASPAR yes 8373320
chr3 186746269 186746281 MEF2D JASPAR yes 71101094
chr3 186746271 186746275 YY1 TRANSFAC yes 8373321
chr3 186746271 186746275 YY1 TRANSFAC yes 71101095
chr3 186746275 186746289 E2F7 JASPAR yes 8373322
chr3 186746275 186746289 E2F7 JASPAR yes 71101096
chr3 186746287 186746291 YY1 TRANSFAC yes 8373323
chr3 186746287 186746291 YY1 TRANSFAC yes 71101097
chr3 186746312 186746317 H4TF1 TRANSFAC yes 8373324
chr3 186746312 186746317 H4TF1 TRANSFAC yes 71101098
chr3 186746319 186746325 MYC TRANSFAC yes 8373325
chr3 186746319 186746325 MYC TRANSFAC yes 71101099
chr3 186746342 186746357 PRDM1 JASPAR yes 8373326
chr3 186746342 186746357 PRDM1 JASPAR yes 71101100
chr3 186746347 186746362 FOXP1 JASPAR yes 8373327
chr3 186746347 186746362 FOXP1 JASPAR yes 71101101
chr3 186746351 186746363 HLF JASPAR yes 8373328
chr3 186746351 186746363 HLF JASPAR yes 71101102
chr3 186746353 186746364 NFIL3 JASPAR yes 8373329
chr3 186746353 186746364 NFIL3 JASPAR yes 71101103
chr3 186746356 186746360 TEAD2 TRANSFAC yes 8373330
chr3 186746356 186746360 TEAD2 TRANSFAC yes 71101104
chr3 186746357 186746372 RUNX2 JASPAR yes 8373331
chr3 186746357 186746372 RUNX2 JASPAR yes 71101105
chr3 186746358 186746361 MYB TRANSFAC yes 8373332
chr3 186746358 186746361 MYB TRANSFAC yes 71101106
chr3 186746358 186746367 RUNX2 JASPAR yes 8373333
chr3 186746358 186746367 RUNX2 JASPAR yes 71101107
chr3 186746358 186746368 RUNX3 JASPAR yes 8373334
chr3 186746358 186746368 RUNX3 JASPAR yes 71101108
chr3 186746358 186746369 RUNX1 JASPAR yes 8373335
chr3 186746358 186746369 RUNX1 JASPAR yes 71101109
chr3 186746358 186746374 ZNF143 JASPAR yes 8373336
chr3 186746358 186746374 ZNF143 JASPAR yes 71101110
SNP sites on vista43490[chr3:186746012-186746360]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186746060 rs140405822 C T no 7264521
chr3 186746136 rs257108 G A no 7264522
chr3 186746137 rs145513058 C T no 7264523
chr3 186746220 rs576416573 A T
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
7264524
Genes possibly regulated by vista43490[chr3:186746012-186746360]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186648274 186796341 + ST6GAL1 ENSG00000073849.10 186648274 0.91 0.98 4361 2262
Expression level of Genes
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miRNAs possibly regulated by vista43490[chr3:186746012-186746360]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results