EnhancerDB
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  3. vista43493[chr3:186819692-186820086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43493[chr3:186819692-186820086]
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Tissue distribution of vista43493
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Transcription factor that possibly regulate vista43493[chr3:186819692-186820086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186819242 186819795 GATA2 UCSC Txn Factor no Conserved 108531303
chr3 186819709 186819723 TLX1 JASPAR yes 8380290
chr3 186819709 186819723 TLX1 JASPAR yes 71101208
chr3 186819710 186819724 TLX1 JASPAR yes 8380291
chr3 186819710 186819724 TLX1 JASPAR yes 71101209
chr3 186819727 186819737 SP1 JASPAR yes 8380292
chr3 186819727 186819737 SP1 JASPAR yes 71101210
chr3 186819741 186819762 IRF1 JASPAR yes 8380293
chr3 186819741 186819762 IRF1 JASPAR yes 71101211
chr3 186819743 186819758 IRF9 JASPAR yes 8380294
chr3 186819743 186819758 IRF9 JASPAR yes 71101212
chr3 186819744 186819758 IRF7 JASPAR yes 8380295
chr3 186819744 186819758 IRF8 JASPAR yes 8380296
chr3 186819744 186819758 IRF7 JASPAR yes 71101213
chr3 186819744 186819758 IRF8 JASPAR yes 71101214
chr3 186819745 186819759 STAT1 JASPAR yes 8380297
chr3 186819745 186819759 STAT1 JASPAR yes 71101215
chr3 186819745 186819760 PRDM1 JASPAR yes 8380298
chr3 186819745 186819760 STAT2 JASPAR yes 8380299
chr3 186819745 186819760 PRDM1 JASPAR yes 71101216
chr3 186819745 186819760 STAT2 JASPAR yes 71101217
chr3 186819745 186819763 IRF2 JASPAR yes 8380300
chr3 186819745 186819763 IRF2 JASPAR yes 71101218
chr3 186819746 186819758 IRF1 JASPAR yes 8380301
chr3 186819746 186819758 IRF1 JASPAR yes 71101219
chr3 186819763 186819778 MEF2C JASPAR yes 8380302
chr3 186819763 186819778 MEF2C JASPAR yes 71101220
chr3 186819769 186819779 NFIA JASPAR yes 8380303
chr3 186819769 186819779 NFIA JASPAR yes 71101221
chr3 186819770 186819779 NFIX JASPAR yes 8380304
chr3 186819770 186819779 NFIX JASPAR yes 71101222
chr3 186819771 186819777 NFIC JASPAR yes 8380305
chr3 186819771 186819777 NFIC JASPAR yes 71101223
chr3 186819779 186819798 REST JASPAR yes 8380306
chr3 186819779 186819798 REST JASPAR yes 71101224
chr3 186819792 186819803 RUNX1 JASPAR yes 8380307
chr3 186819792 186819803 RUNX1 JASPAR yes 71101225
chr3 186819800 186819804 TEAD2 TRANSFAC yes 8380308
chr3 186819800 186819804 TEAD2 TRANSFAC yes 71101226
chr3 186819830 186819845 HSF1 JASPAR yes 8380309
chr3 186819830 186819845 HSF1 JASPAR yes 71101227
chr3 186819831 186819844 HSF1 JASPAR yes 8380310
chr3 186819831 186819844 HSF2 JASPAR yes 8380311
chr3 186819831 186819844 HSF4 JASPAR yes 8380312
chr3 186819831 186819844 HSF1 JASPAR yes 71101228
chr3 186819831 186819844 HSF2 JASPAR yes 71101229
chr3 186819831 186819844 HSF4 JASPAR yes 71101230
chr3 186819866 186819881 RFX5 JASPAR yes 8380313
chr3 186819866 186819881 RFX5 JASPAR yes 71101231
chr3 186819876 186819882 ZNF354C JASPAR yes 8380314
chr3 186819876 186819882 ZNF354C JASPAR yes 71101232
chr3 186819885 186819905 RREB1 JASPAR yes 8380315
chr3 186819885 186819905 RREB1 JASPAR yes 71101233
chr3 186819889 186819904 RUNX2 JASPAR yes 8380316
chr3 186819889 186819904 RUNX2 JASPAR yes 71101234
chr3 186819895 186819916 ZNF263 JASPAR yes 8380317
chr3 186819895 186819916 ZNF263 JASPAR yes 71101235
chr3 186819898 186819903 SP1 TRANSFAC yes 8380318
chr3 186819898 186819903 SP1 TRANSFAC yes 71101236
chr3 186819899 186819909 ZNF740 JASPAR yes 8380319
chr3 186819899 186819909 ZNF740 JASPAR yes 71101237
chr3 186819901 186819911 SP1 JASPAR yes 8380320
chr3 186819901 186819911 SP1 JASPAR yes 71101238
chr3 186819909 186819915 HiNF-A TRANSFAC yes 8380321
chr3 186819909 186819915 HiNF-A TRANSFAC yes 71101239
chr3 186819917 186819930 HSF1 JASPAR yes 8380322
chr3 186819917 186819930 HSF4 JASPAR yes 8380323
chr3 186819917 186819930 HSF1 JASPAR yes 71101240
chr3 186819917 186819930 HSF4 JASPAR yes 71101241
chr3 186819918 186819928 NFATC3 JASPAR yes 8380324
chr3 186819918 186819928 NFATC3 JASPAR yes 71101242
chr3 186819920 186819927 NFATC2 JASPAR yes 8380325
chr3 186819920 186819927 NFATC2 JASPAR yes 71101243
chr3 186819920 186819931 NFKB1 JASPAR yes 8380326
chr3 186819920 186819931 NFKB1 JASPAR yes 71101244
chr3 186819921 186819932 NFKB1 JASPAR yes 8380327
chr3 186819921 186819932 NFKB1 JASPAR yes 71101245
chr3 186819935 186819939 NFE TRANSFAC yes 8380328
chr3 186819935 186819939 NFE TRANSFAC yes 71101246
chr3 186819942 186819957 JUND JASPAR yes 8380329
chr3 186819942 186819957 JUND JASPAR yes 71101247
chr3 186819943 186819956 JUN JASPAR yes 8380330
chr3 186819943 186819956 JUN JASPAR yes 71101248
chr3 186819944 186819958 ATF7 JASPAR yes 8380331
chr3 186819944 186819958 BATF3 JASPAR yes 8380332
chr3 186819944 186819958 ATF7 JASPAR yes 71101249
chr3 186819944 186819958 BATF3 JASPAR yes 71101250
chr3 186819945 186819957 JDP2 JASPAR yes 8380333
chr3 186819945 186819957 JDP2 JASPAR yes 71101251
chr3 186819945 186819960 JUND JASPAR yes 8380334
chr3 186819945 186819960 JUND JASPAR yes 71101252
chr3 186819966 186819981 FOXP1 JASPAR yes 8380335
chr3 186819966 186819981 FOXP1 JASPAR yes 71101253
chr3 186819989 186820004 HNF1A JASPAR yes 8380336
chr3 186819989 186820004 HNF1A JASPAR yes 71101254
chr3 186819992 186820006 GATA2 JASPAR yes 8380337
chr3 186819992 186820006 GATA2 JASPAR yes 71101255
chr3 186820011 186820018 NKX3-1 JASPAR yes 8380338
chr3 186820011 186820018 NKX3-1 JASPAR yes 71101256
chr3 186820045 186820060 RUNX2 JASPAR yes 8380339
chr3 186820045 186820060 RUNX2 JASPAR yes 71101257
chr3 186820048 186820054 SOX10 JASPAR yes 8380340
chr3 186820048 186820054 SOX10 JASPAR yes 71101258
chr3 186820049 186820059 RUNX3 JASPAR yes 8380341
chr3 186820049 186820059 RUNX3 JASPAR yes 71101259
chr3 186820051 186820072 IRF1 JASPAR yes 8380342
chr3 186820051 186820072 IRF1 JASPAR yes 71101260
chr3 186820053 186820068 STAT2 JASPAR yes 8380343
chr3 186820053 186820068 STAT2 JASPAR yes 71101261
chr3 186820056 186820071 FOXP1 JASPAR yes 8380344
chr3 186820056 186820071 FOXP1 JASPAR yes 71101262
chr3 186820057 186820072 FOXP1 JASPAR yes 8380345
chr3 186820057 186820072 FOXP1 JASPAR yes 71101263
chr3 186820060 186820075 FOXP1 JASPAR yes 8380346
chr3 186820060 186820075 FOXP1 JASPAR yes 71101264
chr3 186820080 186820084 YY1 TRANSFAC yes 8380347
chr3 186820080 186820084 YY1 TRANSFAC yes 71101265
SNP sites on vista43493[chr3:186819692-186820086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186819772 rs148378234 T C
GATA2 MEF2C NFIA NFIC NFIX
7265313
chr3 186819826 rs113411247 CT C no 7265314
chr3 186819880 rs76788668 G A
RFX5 ZNF354C
7265315
chr3 186819886 rs145785999 T C
RREB1
7265316
chr3 186819916 rs138644849 G T
ZNF263
7265317
chr3 186820004 rs191212453 A C
GATA2 HNF1A
7265318
chr3 186820026 rs182049895 A G no 7265319
chr3 186820057 rs140744682 GT G
FOXP1 IRF1 RUNX2 RUNX3 STAT2
7265320
chr3 186820058 rs546002125 T G
FOXP1 IRF1 RUNX2 RUNX3 STAT2
7265321
Genes possibly regulated by vista43493[chr3:186819692-186820086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186838736 186898696 - RPL39L ENSG00000163923.5 186898696 0.89 0.8 4362 21390
chr3 186915274 186919253 + RTP1 ENSG00000175077.5 186915274 0.95 1.0 4363 4812
Expression level of Genes
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miRNAs possibly regulated by vista43493[chr3:186819692-186820086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results