EnhancerDB
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  3. vista43498[chr3:186903601-186903921]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43498[chr3:186903601-186903921]
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Tissue distribution of vista43498
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Transcription factor that possibly regulate vista43498[chr3:186903601-186903921]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 186903628 186903633 GATA2 JASPAR yes 8385497
chr3 186903628 186903633 GATA2 JASPAR yes 71101359
chr3 186903652 186903666 JUN JASPAR yes 8385498
chr3 186903652 186903666 JUN JASPAR yes 71101360
chr3 186903656 186903667 NFE2 JASPAR yes 8385499
chr3 186903656 186903667 NFE2 JASPAR yes 71101361
chr3 186903657 186903666 JDP2 JASPAR yes 8385500
chr3 186903657 186903666 JDP2 JASPAR yes 71101362
chr3 186903663 186903667 YY1 TRANSFAC yes 8385501
chr3 186903663 186903667 YY1 TRANSFAC yes 71101363
chr3 186903672 186903693 IRF1 JASPAR yes 8385502
chr3 186903672 186903693 IRF1 JASPAR yes 71101364
chr3 186903677 186903698 ZNF263 JASPAR yes 8385503
chr3 186903677 186903698 ZNF263 JASPAR yes 71101365
chr3 186903684 186903698 TCF7L2 JASPAR yes 8385504
chr3 186903684 186903698 TCF7L2 JASPAR yes 71101366
chr3 186903684 186903699 LEF1 JASPAR yes 8385505
chr3 186903684 186903699 LEF1 JASPAR yes 71101367
chr3 186903689 186903695 SOX10 JASPAR yes 8385506
chr3 186903689 186903695 SOX10 JASPAR yes 71101368
chr3 186903693 186903699 HiNF-A TRANSFAC yes 8385507
chr3 186903693 186903699 HiNF-A TRANSFAC yes 71101369
chr3 186903701 186903709 TBX15 JASPAR yes 8385508
chr3 186903701 186903709 TBX15 JASPAR yes 71101370
chr3 186903702 186903707 SP1 TRANSFAC yes 8385509
chr3 186903702 186903707 SP1 TRANSFAC yes 71101371
chr3 186903704 186903714 GSC2 JASPAR yes 8385510
chr3 186903704 186903714 GSC JASPAR yes 8385511
chr3 186903704 186903714 GSC2 JASPAR yes 71101372
chr3 186903704 186903714 GSC JASPAR yes 71101373
chr3 186903705 186903713 RHOXF1 JASPAR yes 8385512
chr3 186903705 186903713 RHOXF1 JASPAR yes 71101374
chr3 186903705 186903714 PITX3 JASPAR yes 8385513
chr3 186903705 186903714 PITX3 JASPAR yes 71101375
chr3 186903718 186903733 STAT1 JASPAR yes 8385514
chr3 186903718 186903733 STAT1 JASPAR yes 71101376
chr3 186903719 186903731 E2F8 JASPAR yes 8385515
chr3 186903719 186903731 E2F8 JASPAR yes 71101377
chr3 186903726 186903741 PRDM1 JASPAR yes 8385516
chr3 186903726 186903741 STAT2 JASPAR yes 8385517
chr3 186903726 186903741 PRDM1 JASPAR yes 71101378
chr3 186903726 186903741 STAT2 JASPAR yes 71101379
chr3 186903729 186903734 ETS2 TRANSFAC yes 8385518
chr3 186903729 186903734 ETS2 TRANSFAC yes 71101380
chr3 186903792 186903807 JUND JASPAR yes 8385519
chr3 186903792 186903807 JUND JASPAR yes 71101381
chr3 186903852 186903856 LFA1 TRANSFAC yes 8385520
chr3 186903852 186903856 LFA1 TRANSFAC yes 71101382
chr3 186903878 186903897 RFX2 JASPAR yes 8385521
chr3 186903878 186903897 RFX2 JASPAR yes 71101383
chr3 186903882 186903887 H4TF1 TRANSFAC yes 8385522
chr3 186903882 186903887 H4TF1 TRANSFAC yes 71101384
chr3 186903882 186903898 RFX2 JASPAR yes 8385523
chr3 186903882 186903898 RFX3 JASPAR yes 8385524
chr3 186903882 186903898 RFX4 JASPAR yes 8385525
chr3 186903882 186903898 RFX5 JASPAR yes 8385526
chr3 186903882 186903898 RFX2 JASPAR yes 71101385
chr3 186903882 186903898 RFX3 JASPAR yes 71101386
chr3 186903882 186903898 RFX4 JASPAR yes 71101387
chr3 186903882 186903898 RFX5 JASPAR yes 71101388
chr3 186903883 186903902 RFX2 JASPAR yes 8385527
chr3 186903883 186903902 RFX2 JASPAR yes 71101389
chr3 186903889 186903900 DMRT3 JASPAR yes 8385528
chr3 186903889 186903900 DMRT3 JASPAR yes 71101390
chr3 186903895 186903916 IRF1 JASPAR yes 8385529
chr3 186903895 186903916 IRF1 JASPAR yes 71101391
chr3 186903897 186903918 IRF1 JASPAR yes 8385530
chr3 186903897 186903918 IRF1 JASPAR yes 71101392
chr3 186903900 186903915 FOXP1 JASPAR yes 8385531
chr3 186903900 186903915 FOXP1 JASPAR yes 71101393
chr3 186903901 186903916 FOXP1 JASPAR yes 8385532
chr3 186903901 186903916 FOXP1 JASPAR yes 71101394
chr3 186903901 186903922 IRF1 JASPAR yes 8385533
chr3 186903901 186903922 IRF1 JASPAR yes 71101395
chr3 186903902 186903917 FOXP1 JASPAR yes 8385534
chr3 186903902 186903917 FOXP1 JASPAR yes 71101396
chr3 186903903 186903918 FOXP1 JASPAR yes 8385535
chr3 186903903 186903918 FOXP1 JASPAR yes 71101397
chr3 186903903 186903924 IRF1 JASPAR yes 8385536
chr3 186903903 186903924 IRF1 JASPAR yes 71101398
chr3 186903907 186903921 IRF7 JASPAR yes 8385537
chr3 186903907 186903921 IRF7 JASPAR yes 71101399
SNP sites on vista43498[chr3:186903601-186903921]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 186903643 rs141129375 G A no 7265929
chr3 186903769 rs186703032 G A no 7265930
chr3 186903825 rs117532520 A G no 7265931
chr3 186903833 rs139078302 G A,C no 7265932
chr3 186903893 rs192754076 G A
DMRT3 RFX2 RFX3 RFX4 RFX5
7265933
chr3 186903921 rs185413033 T C
IRF1 IRF7
7265934
Genes possibly regulated by vista43498[chr3:186903601-186903921]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 186838736 186898696 - RPL39L ENSG00000163923.5 186898696 0.89 0.8 4362 95095
chr3 186915274 186919253 + RTP1 ENSG00000175077.5 186915274 0.95 1.0 4363 88647
Expression level of Genes
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miRNAs possibly regulated by vista43498[chr3:186903601-186903921]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results