EnhancerDB
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  3. vista43512[chr3:187520692-187521092]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43512[chr3:187520692-187521092]
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Tissue distribution of vista43512
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Transcription factor that possibly regulate vista43512[chr3:187520692-187521092]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187520647 187520957 POU2F2 UCSC Txn Factor no Conserved 108531314
chr3 187520648 187521105 NFIC UCSC Txn Factor no Conserved 108531315
chr3 187520688 187521063 EP300 UCSC Txn Factor no Conserved 108531316
chr3 187520694 187521043 FOXM1 UCSC Txn Factor no Conserved 108531317
chr3 187520706 187521060 ATF2 UCSC Txn Factor no Conserved 108531318
chr3 187520720 187521045 RUNX3 UCSC Txn Factor no Conserved 108531319
chr3 187520759 187521016 BCL11A UCSC Txn Factor no Conserved 108531320
chr3 187520764 187520992 PAX5 UCSC Txn Factor no Conserved 108531321
chr3 187520765 187521024 IRF4 UCSC Txn Factor no Conserved 108531322
chr3 187520779 187521046 BATF UCSC Txn Factor no Conserved 108531323
chr3 187520688 187520693 SP1 TRANSFAC yes 8412978
chr3 187520688 187520693 SP1 TRANSFAC yes 71101857
chr3 187520693 187520711 NR3C1 JASPAR yes 8412979
chr3 187520693 187520711 NR3C1 JASPAR yes 71101858
chr3 187520700 187520718 IRF2 JASPAR yes 8412980
chr3 187520700 187520718 IRF2 JASPAR yes 71101859
chr3 187520701 187520722 IRF1 JASPAR yes 8412981
chr3 187520701 187520722 IRF1 JASPAR yes 71101860
chr3 187520709 187520720 ELK4 JASPAR yes 8412982
chr3 187520709 187520720 ELK4 JASPAR yes 71101861
chr3 187520709 187520722 ELF3 JASPAR yes 8412983
chr3 187520709 187520722 ELF3 JASPAR yes 71101862
chr3 187520709 187520726 RXRA JASPAR yes 8412984
chr3 187520709 187520726 RXRA JASPAR yes 71101863
chr3 187520710 187520720 ETV6 JASPAR yes 8412985
chr3 187520710 187520720 ETV6 JASPAR yes 71101864
chr3 187520710 187520721 ELF5 JASPAR yes 8412986
chr3 187520710 187520721 ELF5 JASPAR yes 71101865
chr3 187520710 187520722 EHF JASPAR yes 8412987
chr3 187520710 187520722 ELF1 JASPAR yes 8412988
chr3 187520710 187520722 ELF4 JASPAR yes 8412989
chr3 187520710 187520722 EHF JASPAR yes 71101866
chr3 187520710 187520722 ELF1 JASPAR yes 71101867
chr3 187520710 187520722 ELF4 JASPAR yes 71101868
chr3 187520710 187520723 ELF1 JASPAR yes 8412990
chr3 187520710 187520723 ELF1 JASPAR yes 71101869
chr3 187520710 187520724 SPI1 JASPAR yes 8412991
chr3 187520710 187520724 SPIC JASPAR yes 8412992
chr3 187520710 187520724 SPI1 JASPAR yes 71101870
chr3 187520710 187520724 SPIC JASPAR yes 71101871
chr3 187520712 187520718 ETS1 JASPAR yes 8412993
chr3 187520712 187520718 SPI1 JASPAR yes 8412994
chr3 187520712 187520718 ETS1 JASPAR yes 71101872
chr3 187520712 187520718 SPI1 JASPAR yes 71101873
chr3 187520727 187520737 MAX JASPAR yes 8412995
chr3 187520727 187520737 MAX JASPAR yes 71101874
chr3 187520745 187520750 SP1 TRANSFAC yes 8412996
chr3 187520745 187520750 SP1 TRANSFAC yes 71101875
chr3 187520745 187520759 PLAG1 JASPAR yes 8412997
chr3 187520745 187520759 PLAG1 JASPAR yes 71101876
chr3 187520757 187520766 SNAI2 JASPAR yes 8412998
chr3 187520757 187520766 SNAI2 JASPAR yes 71101877
chr3 187520757 187520767 ID4 JASPAR yes 8412999
chr3 187520757 187520767 TCF3 JASPAR yes 8413000
chr3 187520757 187520767 TCF4 JASPAR yes 8413001
chr3 187520757 187520767 ID4 JASPAR yes 71101878
chr3 187520757 187520767 TCF3 JASPAR yes 71101879
chr3 187520757 187520767 TCF4 JASPAR yes 71101880
chr3 187520763 187520779 POU4F3 JASPAR yes 8413002
chr3 187520763 187520779 POU4F3 JASPAR yes 71101881
chr3 187520765 187520779 POU4F1 JASPAR yes 8413003
chr3 187520765 187520779 POU4F1 JASPAR yes 71101882
chr3 187520767 187520773 TBP TRANSFAC yes 8413004
chr3 187520767 187520773 TBP TRANSFAC yes 71101883
chr3 187520771 187520784 POU2F2 JASPAR yes 8413005
chr3 187520771 187520784 POU2F2 JASPAR yes 71101884
chr3 187520774 187520784 BHLHE22 JASPAR yes 8413006
chr3 187520774 187520784 NEUROD2 JASPAR yes 8413007
chr3 187520774 187520784 BHLHE22 JASPAR yes 71101885
chr3 187520774 187520784 NEUROD2 JASPAR yes 71101886
chr3 187520798 187520809 NRL JASPAR yes 8413008
chr3 187520798 187520809 NRL JASPAR yes 71101887
chr3 187520825 187520838 ATF4 JASPAR yes 8413009
chr3 187520825 187520838 ATF4 JASPAR yes 71101888
chr3 187520831 187520837 ETS1 JASPAR yes 8413010
chr3 187520831 187520837 SPI1 JASPAR yes 8413011
chr3 187520831 187520837 ETS1 JASPAR yes 71101889
chr3 187520831 187520837 SPI1 JASPAR yes 71101890
chr3 187520849 187520852 MYB TRANSFAC yes 8413012
chr3 187520849 187520852 MYB TRANSFAC yes 71101891
chr3 187520854 187520868 GATA2 JASPAR yes 8413013
chr3 187520854 187520868 GATA2 JASPAR yes 71101892
chr3 187520862 187520877 IRF9 JASPAR yes 8413014
chr3 187520862 187520877 IRF9 JASPAR yes 71101893
chr3 187520864 187520879 STAT2 JASPAR yes 8413015
chr3 187520864 187520879 STAT2 JASPAR yes 71101894
chr3 187520890 187520906 GLIS1 JASPAR yes 8413016
chr3 187520890 187520906 GLIS1 JASPAR yes 71101895
chr3 187520921 187520933 IRF1 JASPAR yes 8413017
chr3 187520921 187520933 IRF1 JASPAR yes 71101896
chr3 187520952 187520958 ZNF354C JASPAR yes 8413018
chr3 187520952 187520958 ZNF354C JASPAR yes 71101897
chr3 187520957 187520965 PAX4 JASPAR yes 8413019
chr3 187520957 187520965 PAX4 JASPAR yes 71101898
chr3 187520961 187520980 REST JASPAR yes 8413020
chr3 187520961 187520980 REST JASPAR yes 71101899
chr3 187520989 187521001 IRF1 JASPAR yes 8413021
chr3 187520989 187521001 IRF1 JASPAR yes 71101900
chr3 187520989 187521010 IRF1 JASPAR yes 8413022
chr3 187520989 187521010 IRF1 JASPAR yes 71101901
chr3 187520993 187521008 STAT2 JASPAR yes 8413023
chr3 187520993 187521008 STAT2 JASPAR yes 71101902
chr3 187520995 187521016 IRF1 JASPAR yes 8413024
chr3 187520995 187521016 IRF1 JASPAR yes 71101903
chr3 187521005 187521012 NFATC2 JASPAR yes 8413025
chr3 187521005 187521012 NFATC2 JASPAR yes 71101904
chr3 187521006 187521020 STAT1 JASPAR yes 8413026
chr3 187521006 187521020 STAT1 JASPAR yes 71101905
chr3 187521010 187521015 ETS2 TRANSFAC yes 8413027
chr3 187521010 187521015 ETS2 TRANSFAC yes 71101906
chr3 187521019 187521029 BHLHE22 JASPAR yes 8413028
chr3 187521019 187521029 OLIG3 JASPAR yes 8413029
chr3 187521019 187521029 BHLHE22 JASPAR yes 71101907
chr3 187521019 187521029 OLIG3 JASPAR yes 71101908
chr3 187521030 187521045 SCRT1 JASPAR yes 8413030
chr3 187521030 187521045 SCRT1 JASPAR yes 71101909
chr3 187521032 187521045 SCRT2 JASPAR yes 8413031
chr3 187521032 187521045 SCRT2 JASPAR yes 71101910
chr3 187521066 187521081 MEF2C JASPAR yes 8413032
chr3 187521066 187521081 MEF2C JASPAR yes 71101911
chr3 187521085 187521100 FOXP1 JASPAR yes 8413033
chr3 187521085 187521100 FOXP1 JASPAR yes 71101912
chr3 187521088 187521099 FOXP2 JASPAR yes 8413034
chr3 187521088 187521099 FOXP2 JASPAR yes 71101913
chr3 187521089 187521097 FOXO3 JASPAR yes 8413035
chr3 187521089 187521097 FOXO3 JASPAR yes 71101914
SNP sites on vista43512[chr3:187520692-187521092]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187520742 rs7637438 A G
ATF2 EP300 FOXM1 NFIC POU2F2 RUNX3
7268816
chr3 187520747 rs571202889 G A
ATF2 EP300 FOXM1 NFIC PLAG1 POU2F2 RUNX3 SP1
7268817
chr3 187520901 rs114406405 C G,T
ATF2 BATF BCL11A EP300 FOXM1 GLIS1 IRF4 NFIC PAX5 POU2F2 RUNX3
7268818
chr3 187521052 rs116704624 G A
ATF2 EP300 NFIC
7268819
chr3 187521086 rs73886587 C T
FOXP1 NFIC
7268820
Genes possibly regulated by vista43512[chr3:187520692-187521092]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187439165 187463515 - BCL6 ENSG00000113916.13 187463515 0.78 0.99 4369 42823
Expression level of Genes
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miRNAs possibly regulated by vista43512[chr3:187520692-187521092]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 7.981801492596879e-05 0.727449 0.599891 1214
Expression level of miRNAs
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