EnhancerDB
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  3. vista43516[chr3:187574248-187574709]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43516[chr3:187574248-187574709]
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Tissue distribution of vista43516
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Transcription factor that possibly regulate vista43516[chr3:187574248-187574709]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187574238 187574250 FOXI1 JASPAR yes 8419322
chr3 187574238 187574250 FOXI1 JASPAR yes 71102086
chr3 187574254 187574259 H4TF1 TRANSFAC yes 8419323
chr3 187574254 187574259 H4TF1 TRANSFAC yes 71102087
chr3 187574259 187574265 SOX10 JASPAR yes 8419324
chr3 187574259 187574265 SOX10 JASPAR yes 71102088
chr3 187574264 187574274 NFIA JASPAR yes 8419325
chr3 187574264 187574274 NFIA JASPAR yes 71102089
chr3 187574266 187574272 NFIC JASPAR yes 8419326
chr3 187574266 187574272 NFIC JASPAR yes 71102090
chr3 187574283 187574288 NFY TRANSFAC yes 8419327
chr3 187574283 187574288 NFY TRANSFAC yes 71102091
chr3 187574290 187574301 CDX2 JASPAR yes 8419328
chr3 187574290 187574301 CDX2 JASPAR yes 71102092
chr3 187574291 187574302 HOXA10 JASPAR yes 8419329
chr3 187574291 187574302 HOXA10 JASPAR yes 71102093
chr3 187574292 187574301 CDX1 JASPAR yes 8419330
chr3 187574292 187574301 CDX1 JASPAR yes 71102094
chr3 187574324 187574338 STAT1 JASPAR yes 8419331
chr3 187574324 187574338 STAT1 JASPAR yes 71102095
chr3 187574324 187574339 PRDM1 JASPAR yes 8419332
chr3 187574324 187574339 STAT2 JASPAR yes 8419333
chr3 187574324 187574339 PRDM1 JASPAR yes 71102096
chr3 187574324 187574339 STAT2 JASPAR yes 71102097
chr3 187574327 187574337 NFATC3 JASPAR yes 8419334
chr3 187574327 187574337 NFATC3 JASPAR yes 71102098
chr3 187574332 187574346 TCF7L2 JASPAR yes 8419335
chr3 187574332 187574346 TCF7L2 JASPAR yes 71102099
chr3 187574332 187574347 LEF1 JASPAR yes 8419336
chr3 187574332 187574347 LEF1 JASPAR yes 71102100
chr3 187574356 187574361 MYC TRANSFAC yes 8419337
chr3 187574356 187574361 MYC TRANSFAC yes 71102101
chr3 187574362 187574378 E2F2 JASPAR yes 8419338
chr3 187574362 187574378 E2F2 JASPAR yes 71102102
chr3 187574372 187574386 IRF7 JASPAR yes 8419339
chr3 187574372 187574386 IRF7 JASPAR yes 71102103
chr3 187574374 187574380 TCF4 TRANSFAC yes 8419340
chr3 187574374 187574380 TCF4 TRANSFAC yes 71102104
chr3 187574374 187574389 FOXP1 JASPAR yes 8419341
chr3 187574374 187574389 FOXP1 JASPAR yes 71102105
chr3 187574375 187574384 SRY JASPAR yes 8419342
chr3 187574375 187574384 SRY JASPAR yes 71102106
chr3 187574375 187574386 FOXP2 JASPAR yes 8419343
chr3 187574375 187574386 FOXP2 JASPAR yes 71102107
chr3 187574384 187574405 IRF1 JASPAR yes 8419344
chr3 187574384 187574405 IRF1 JASPAR yes 71102108
chr3 187574386 187574401 STAT2 JASPAR yes 8419345
chr3 187574386 187574401 STAT2 JASPAR yes 71102109
chr3 187574389 187574404 FOXP1 JASPAR yes 8419346
chr3 187574389 187574404 FOXP1 JASPAR yes 71102110
chr3 187574390 187574405 FOXP1 JASPAR yes 8419347
chr3 187574390 187574405 FOXP1 JASPAR yes 71102111
chr3 187574391 187574406 FOXP1 JASPAR yes 8419348
chr3 187574391 187574406 FOXP1 JASPAR yes 71102112
chr3 187574392 187574407 FOXP1 JASPAR yes 8419349
chr3 187574392 187574407 FOXP1 JASPAR yes 71102113
chr3 187574410 187574414 YY1 TRANSFAC yes 8419350
chr3 187574410 187574414 YY1 TRANSFAC yes 71102114
chr3 187574424 187574428 NFE TRANSFAC yes 8419351
chr3 187574424 187574428 NFE TRANSFAC yes 71102115
chr3 187574426 187574441 LEF1 JASPAR yes 8419352
chr3 187574426 187574441 LEF1 JASPAR yes 71102116
chr3 187574427 187574441 TCF7L2 JASPAR yes 8419353
chr3 187574427 187574441 TCF7L2 JASPAR yes 71102117
chr3 187574427 187574444 RXRA JASPAR yes 8419354
chr3 187574427 187574444 RXRA JASPAR yes 71102118
chr3 187574442 187574446 NFE TRANSFAC yes 8419355
chr3 187574442 187574446 NFE TRANSFAC yes 71102119
chr3 187574444 187574459 LEF1 JASPAR yes 8419356
chr3 187574444 187574459 LEF1 JASPAR yes 71102120
chr3 187574445 187574459 TCF7L2 JASPAR yes 8419357
chr3 187574445 187574459 TCF7L2 JASPAR yes 71102121
chr3 187574450 187574461 USF1 JASPAR yes 8419358
chr3 187574450 187574461 USF2 JASPAR yes 8419359
chr3 187574450 187574461 USF1 JASPAR yes 71102122
chr3 187574450 187574461 USF2 JASPAR yes 71102123
chr3 187574468 187574472 ESR1 TRANSFAC yes 8419360
chr3 187574468 187574472 ESR1 TRANSFAC yes 71102124
chr3 187574487 187574491 YY1 TRANSFAC yes 8419361
chr3 187574487 187574491 YY1 TRANSFAC yes 71102125
chr3 187574487 187574505 SRF JASPAR yes 8419362
chr3 187574487 187574505 SRF JASPAR yes 71102126
chr3 187574488 187574499 CEBPA JASPAR yes 8419363
chr3 187574488 187574499 CEBPA JASPAR yes 71102127
chr3 187574489 187574507 SRF JASPAR yes 8419364
chr3 187574489 187574507 SRF JASPAR yes 71102128
chr3 187574493 187574497 H1TF2 TRANSFAC yes 8419365
chr3 187574493 187574497 NFE TRANSFAC yes 8419366
chr3 187574493 187574497 SRF TRANSFAC yes 8419367
chr3 187574493 187574497 H1TF2 TRANSFAC yes 71102129
chr3 187574493 187574497 NFE TRANSFAC yes 71102130
chr3 187574493 187574497 SRF TRANSFAC yes 71102131
chr3 187574525 187574540 MYBL2 JASPAR yes 8419368
chr3 187574525 187574540 MYBL2 JASPAR yes 71102132
chr3 187574527 187574541 RXRB JASPAR yes 8419369
chr3 187574527 187574541 RXRB JASPAR yes 71102133
chr3 187574561 187574565 LFA1 TRANSFAC yes 8419370
chr3 187574561 187574565 LFA1 TRANSFAC yes 71102134
chr3 187574603 187574609 GATA3 JASPAR yes 8419371
chr3 187574603 187574609 GATA3 JASPAR yes 71102135
chr3 187574646 187574654 FEV JASPAR yes 8419372
chr3 187574646 187574654 FEV JASPAR yes 71102136
chr3 187574649 187574667 NFYA JASPAR yes 8419373
chr3 187574649 187574667 NFYA JASPAR yes 71102137
chr3 187574653 187574657 H1TF2 TRANSFAC yes 8419374
chr3 187574653 187574657 NFE TRANSFAC yes 8419375
chr3 187574653 187574657 SRF TRANSFAC yes 8419376
chr3 187574653 187574657 H1TF2 TRANSFAC yes 71102138
chr3 187574653 187574657 NFE TRANSFAC yes 71102139
chr3 187574653 187574657 SRF TRANSFAC yes 71102140
chr3 187574667 187574674 JUN TRANSFAC yes 8419377
chr3 187574667 187574674 JUN TRANSFAC yes 71102141
chr3 187574682 187574686 NFE TRANSFAC yes 8419378
chr3 187574682 187574686 NFE TRANSFAC yes 71102142
chr3 187574686 187574700 PAX6 JASPAR yes 8419379
chr3 187574686 187574700 PAX6 JASPAR yes 71102143
chr3 187574693 187574711 NR3C1 JASPAR yes 8419380
chr3 187574693 187574711 NR3C1 JASPAR yes 71102144
chr3 187574706 187574712 MZF1 JASPAR yes 8419381
chr3 187574706 187574712 MZF1 JASPAR yes 71102145
SNP sites on vista43516[chr3:187574248-187574709]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187574267 rs556623366 TGC T
NFIA NFIC
7269367
chr3 187574306 rs143218231 T C no 7269368
chr3 187574687 rs118152410 C T
PAX6
7269369
Genes possibly regulated by vista43516[chr3:187574248-187574709]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43516[chr3:187574248-187574709]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 9.420884755662624e-05 0.727449 0.599891 1214
Expression level of miRNAs
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