EnhancerDB
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  3. vista43517[chr3:187607399-187607588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43517[chr3:187607399-187607588]
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Tissue distribution of vista43517
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Transcription factor that possibly regulate vista43517[chr3:187607399-187607588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187607332 187607656 CEBPB UCSC Txn Factor no Conserved 108531325
chr3 187607400 187607415 HNF4G JASPAR yes 8421315
chr3 187607400 187607415 HNF4G JASPAR yes 71102146
chr3 187607401 187607416 HNF4A JASPAR yes 8421316
chr3 187607401 187607416 HNF4A JASPAR yes 71102147
chr3 187607421 187607425 YY1 TRANSFAC yes 8421317
chr3 187607421 187607425 YY1 TRANSFAC yes 71102148
chr3 187607426 187607431 GATA2 JASPAR yes 8421318
chr3 187607426 187607431 GATA2 JASPAR yes 71102149
chr3 187607427 187607433 ZNF354C JASPAR yes 8421319
chr3 187607427 187607433 ZNF354C JASPAR yes 71102150
chr3 187607432 187607438 NFE2 TRANSFAC yes 8421320
chr3 187607432 187607438 NFE2 TRANSFAC yes 71102151
chr3 187607450 187607460 SREBF2 JASPAR yes 8421321
chr3 187607450 187607460 SREBF2 JASPAR yes 71102152
chr3 187607463 187607478 HNF4A JASPAR yes 8421322
chr3 187607463 187607478 HNF4A JASPAR yes 71102153
chr3 187607464 187607479 TFAP2A JASPAR yes 8421323
chr3 187607464 187607479 TFAP2A JASPAR yes 71102154
chr3 187607484 187607495 CEBPA JASPAR yes 8421324
chr3 187607484 187607495 CEBPA JASPAR yes 71102155
chr3 187607485 187607495 CEBPB JASPAR yes 8421325
chr3 187607485 187607495 CEBPD JASPAR yes 8421326
chr3 187607485 187607495 CEBPE JASPAR yes 8421327
chr3 187607485 187607495 CEBPG JASPAR yes 8421328
chr3 187607485 187607495 CEBPB JASPAR yes 71102156
chr3 187607485 187607495 CEBPD JASPAR yes 71102157
chr3 187607485 187607495 CEBPE JASPAR yes 71102158
chr3 187607485 187607495 CEBPG JASPAR yes 71102159
chr3 187607485 187607496 CEBPB JASPAR yes 8421329
chr3 187607485 187607496 CEBPB JASPAR yes 71102160
chr3 187607506 187607519 ATF4 JASPAR yes 8421330
chr3 187607506 187607519 ATF4 JASPAR yes 71102161
chr3 187607507 187607518 CEBPA JASPAR yes 8421331
chr3 187607507 187607518 CEBPA JASPAR yes 71102162
chr3 187607514 187607527 NR2F1 JASPAR yes 8421332
chr3 187607514 187607527 NR2F1 JASPAR yes 71102163
chr3 187607529 187607533 NFE TRANSFAC yes 8421333
chr3 187607529 187607533 NFE TRANSFAC yes 71102164
chr3 187607529 187607534 GATA1 TRANSFAC yes 8421334
chr3 187607529 187607534 GATA1 TRANSFAC yes 71102165
chr3 187607529 187607535 GATA3 JASPAR yes 8421335
chr3 187607529 187607535 GATA3 JASPAR yes 71102166
chr3 187607530 187607544 EBF1 JASPAR yes 8421336
chr3 187607530 187607544 EBF1 JASPAR yes 71102167
chr3 187607532 187607543 EBF1 JASPAR yes 8421337
chr3 187607532 187607543 EBF1 JASPAR yes 71102168
chr3 187607536 187607541 TFAP2A TRANSFAC yes 8421338
chr3 187607536 187607541 TFAP2A TRANSFAC yes 71102169
chr3 187607536 187607542 MZF1 JASPAR yes 8421339
chr3 187607536 187607542 MZF1 JASPAR yes 71102170
chr3 187607543 187607552 THAP1 JASPAR yes 8421340
chr3 187607543 187607552 THAP1 JASPAR yes 71102171
chr3 187607583 187607587 NFE TRANSFAC yes 8421341
chr3 187607583 187607587 NFE TRANSFAC yes 71102172
SNP sites on vista43517[chr3:187607399-187607588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187607470 rs541501003 T G
CEBPB HNF4A TFAP2A
7269554
chr3 187607504 rs9808926 C T
CEBPB
7269555
chr3 187607551 rs16862692 A G
CEBPB THAP1
7269556
chr3 187607569 rs75931227 G A
CEBPB
7269557
Genes possibly regulated by vista43517[chr3:187607399-187607588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43517[chr3:187607399-187607588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 0.0001059815213647392 0.727449 0.599891 1214
Expression level of miRNAs
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