EnhancerDB
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  3. vista43519[chr3:187660565-187660767]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43519[chr3:187660565-187660767]
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Tissue distribution of vista43519
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Transcription factor that possibly regulate vista43519[chr3:187660565-187660767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187660387 187661939 POLR2A UCSC Txn Factor no Conserved 108531330
chr3 187660583 187660587 H4TF2 TRANSFAC yes 8427137
chr3 187660583 187660587 H4TF2 TRANSFAC yes 71102226
chr3 187660600 187660605 TFAP2A TRANSFAC yes 8427138
chr3 187660600 187660605 TFAP2A TRANSFAC yes 71102227
chr3 187660600 187660606 MZF1 JASPAR yes 8427139
chr3 187660600 187660606 MZF1 JASPAR yes 71102228
chr3 187660600 187660611 NFKB1 JASPAR yes 8427140
chr3 187660600 187660611 NFKB1 JASPAR yes 71102229
chr3 187660600 187660613 NFKB1 JASPAR yes 8427141
chr3 187660600 187660613 NFKB2 JASPAR yes 8427142
chr3 187660600 187660613 NFKB1 JASPAR yes 71102230
chr3 187660600 187660613 NFKB2 JASPAR yes 71102231
chr3 187660601 187660611 NFKB1 JASPAR yes 8427143
chr3 187660601 187660611 NFKB1 JASPAR yes 71102232
chr3 187660601 187660612 NFKB1 JASPAR yes 8427144
chr3 187660601 187660612 NFKB1 JASPAR yes 71102233
chr3 187660602 187660612 NFKB1 JASPAR yes 8427145
chr3 187660602 187660612 NFKB1 JASPAR yes 71102234
chr3 187660605 187660616 E2F4 JASPAR yes 8427146
chr3 187660605 187660616 E2F4 JASPAR yes 71102235
chr3 187660608 187660614 SP1 TRANSFAC yes 8427147
chr3 187660608 187660614 SP1 TRANSFAC yes 71102236
chr3 187660610 187660615 SP1 TRANSFAC yes 8427148
chr3 187660610 187660615 SP1 TRANSFAC yes 71102237
chr3 187660647 187660659 MYBL1 JASPAR yes 8427149
chr3 187660647 187660659 MYBL1 JASPAR yes 71102238
chr3 187660652 187660655 MYB TRANSFAC yes 8427150
chr3 187660652 187660655 MYB TRANSFAC yes 71102239
chr3 187660652 187660669 RXRA JASPAR yes 8427151
chr3 187660652 187660669 RXRA JASPAR yes 71102240
chr3 187660665 187660684 PAX5 JASPAR yes 8427152
chr3 187660665 187660684 PAX5 JASPAR yes 71102241
chr3 187660670 187660681 NRL JASPAR yes 8427153
chr3 187660670 187660681 NRL JASPAR yes 71102242
chr3 187660693 187660707 POU1F1 JASPAR yes 8427154
chr3 187660693 187660707 POU1F1 JASPAR yes 71102243
chr3 187660695 187660704 POU3F4 JASPAR yes 8427155
chr3 187660695 187660704 POU5F1B JASPAR yes 8427156
chr3 187660695 187660704 POU3F4 JASPAR yes 71102244
chr3 187660695 187660704 POU5F1B JASPAR yes 71102245
chr3 187660698 187660713 JUND JASPAR yes 8427157
chr3 187660698 187660713 JUND JASPAR yes 71102246
chr3 187660699 187660712 JUN JASPAR yes 8427158
chr3 187660699 187660712 JUN JASPAR yes 71102247
chr3 187660700 187660713 ATF4 JASPAR yes 8427159
chr3 187660700 187660713 ATF4 JASPAR yes 71102248
chr3 187660701 187660712 CEBPA JASPAR yes 8427160
chr3 187660701 187660712 CEBPA JASPAR yes 71102249
chr3 187660702 187660713 CEBPB JASPAR yes 8427161
chr3 187660702 187660713 CEBPB JASPAR yes 71102250
chr3 187660705 187660716 CDX2 JASPAR yes 8427162
chr3 187660705 187660716 CDX2 JASPAR yes 71102251
chr3 187660706 187660717 HOXA10 JASPAR yes 8427163
chr3 187660706 187660717 HOXA10 JASPAR yes 71102252
chr3 187660707 187660716 CDX1 JASPAR yes 8427164
chr3 187660707 187660716 CDX1 JASPAR yes 71102253
chr3 187660707 187660717 HOXA13 JASPAR yes 8427165
chr3 187660707 187660717 HOXB13 JASPAR yes 8427166
chr3 187660707 187660717 HOXD13 JASPAR yes 8427167
chr3 187660707 187660717 HOXA13 JASPAR yes 71102254
chr3 187660707 187660717 HOXB13 JASPAR yes 71102255
chr3 187660707 187660717 HOXD13 JASPAR yes 71102256
chr3 187660708 187660720 FOXI1 JASPAR yes 8427168
chr3 187660708 187660720 FOXI1 JASPAR yes 71102257
chr3 187660720 187660738 MAFF JASPAR yes 8427169
chr3 187660720 187660738 MAFF JASPAR yes 71102258
chr3 187660722 187660737 MAFK JASPAR yes 8427170
chr3 187660722 187660737 MAFK JASPAR yes 71102259
chr3 187660725 187660746 IRF1 JASPAR yes 8427171
chr3 187660725 187660746 IRF1 JASPAR yes 71102260
chr3 187660728 187660742 IRF7 JASPAR yes 8427172
chr3 187660728 187660742 IRF8 JASPAR yes 8427173
chr3 187660728 187660742 IRF7 JASPAR yes 71102261
chr3 187660728 187660742 IRF8 JASPAR yes 71102262
chr3 187660729 187660744 PRDM1 JASPAR yes 8427174
chr3 187660729 187660744 PRDM1 JASPAR yes 71102263
chr3 187660730 187660742 IRF1 JASPAR yes 8427175
chr3 187660730 187660742 IRF1 JASPAR yes 71102264
chr3 187660735 187660746 NFKB1 JASPAR yes 8427176
chr3 187660735 187660746 NFKB1 JASPAR yes 71102265
chr3 187660736 187660746 NFKB1 JASPAR yes 8427177
chr3 187660736 187660746 REL JASPAR yes 8427178
chr3 187660736 187660746 NFKB1 JASPAR yes 71102266
chr3 187660736 187660746 REL JASPAR yes 71102267
chr3 187660756 187660760 YY1 TRANSFAC yes 8427179
chr3 187660756 187660760 YY1 TRANSFAC yes 71102268
chr3 187660758 187660768 MEF2A JASPAR yes 8427180
chr3 187660758 187660768 MEF2A JASPAR yes 71102269
chr3 187660762 187660780 IRF2 JASPAR yes 8427181
chr3 187660762 187660780 IRF2 JASPAR yes 71102270
chr3 187660765 187660780 PRDM1 JASPAR yes 8427182
chr3 187660765 187660780 STAT2 JASPAR yes 8427183
chr3 187660765 187660780 PRDM1 JASPAR yes 71102271
chr3 187660765 187660780 STAT2 JASPAR yes 71102272
SNP sites on vista43519[chr3:187660565-187660767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187660595 rs550767126 C T
POLR2A
7270183
chr3 187660636 rs78655608 T A
POLR2A
7270184
Genes possibly regulated by vista43519[chr3:187660565-187660767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43519[chr3:187660565-187660767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 0.00013268632951702177 0.727449 0.599891 1214
Expression level of miRNAs
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