EnhancerDB
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  3. vista43525[chr3:187687318-187687647]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43525[chr3:187687318-187687647]
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Tissue distribution of vista43525
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Transcription factor that possibly regulate vista43525[chr3:187687318-187687647]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187687325 187687338 SMAD2 JASPAR yes 8430835
chr3 187687325 187687338 SMAD2 JASPAR yes 71102470
chr3 187687327 187687346 CTCF JASPAR yes 8430836
chr3 187687327 187687346 CTCF JASPAR yes 71102471
chr3 187687331 187687340 NKX3-2 JASPAR yes 8430837
chr3 187687331 187687340 NKX3-2 JASPAR yes 71102472
chr3 187687354 187687366 GLI2 JASPAR yes 8430838
chr3 187687354 187687366 GLI2 JASPAR yes 71102473
chr3 187687360 187687364 ESR1 TRANSFAC yes 8430839
chr3 187687360 187687364 ESR1 TRANSFAC yes 71102474
chr3 187687365 187687369 YY1 TRANSFAC yes 8430840
chr3 187687365 187687369 YY1 TRANSFAC yes 71102475
chr3 187687371 187687375 NFE TRANSFAC yes 8430841
chr3 187687371 187687375 NFE TRANSFAC yes 71102476
chr3 187687392 187687396 NFE TRANSFAC yes 8430842
chr3 187687392 187687396 NFE TRANSFAC yes 71102477
chr3 187687408 187687422 BATF3 JASPAR yes 8430843
chr3 187687408 187687422 BATF3 JASPAR yes 71102478
chr3 187687411 187687423 PKNOX1 JASPAR yes 8430844
chr3 187687411 187687423 PKNOX2 JASPAR yes 8430845
chr3 187687411 187687423 TGIF1 JASPAR yes 8430846
chr3 187687411 187687423 TGIF2 JASPAR yes 8430847
chr3 187687411 187687423 PKNOX1 JASPAR yes 71102479
chr3 187687411 187687423 PKNOX2 JASPAR yes 71102480
chr3 187687411 187687423 TGIF1 JASPAR yes 71102481
chr3 187687411 187687423 TGIF2 JASPAR yes 71102482
chr3 187687412 187687422 NEUROG2 JASPAR yes 8430848
chr3 187687412 187687422 NEUROG2 JASPAR yes 71102483
chr3 187687421 187687425 H1TF2 TRANSFAC yes 8430849
chr3 187687421 187687425 NFE TRANSFAC yes 8430850
chr3 187687421 187687425 SRF TRANSFAC yes 8430851
chr3 187687421 187687425 H1TF2 TRANSFAC yes 71102484
chr3 187687421 187687425 NFE TRANSFAC yes 71102485
chr3 187687421 187687425 SRF TRANSFAC yes 71102486
chr3 187687421 187687427 NFYC TRANSFAC yes 8430852
chr3 187687421 187687427 NFYC TRANSFAC yes 71102487
chr3 187687435 187687450 NR2C2 JASPAR yes 8430853
chr3 187687435 187687450 NR2C2 JASPAR yes 71102488
chr3 187687453 187687471 TP73 JASPAR yes 8430854
chr3 187687453 187687471 TP73 JASPAR yes 71102489
chr3 187687456 187687467 FOXA1 JASPAR yes 8430855
chr3 187687456 187687467 FOXA1 JASPAR yes 71102490
chr3 187687458 187687469 FOXP2 JASPAR yes 8430856
chr3 187687458 187687469 FOXP2 JASPAR yes 71102491
chr3 187687459 187687467 FOXO3 JASPAR yes 8430857
chr3 187687459 187687467 FOXO3 JASPAR yes 71102492
chr3 187687493 187687505 MEF2B JASPAR yes 8430858
chr3 187687493 187687505 MEF2D JASPAR yes 8430859
chr3 187687493 187687505 MEF2B JASPAR yes 71102493
chr3 187687493 187687505 MEF2D JASPAR yes 71102494
chr3 187687494 187687504 MEF2A JASPAR yes 8430860
chr3 187687494 187687504 MEF2A JASPAR yes 71102495
chr3 187687518 187687529 CEBPA JASPAR yes 8430861
chr3 187687518 187687529 CEBPA JASPAR yes 71102496
chr3 187687519 187687530 CEBPB JASPAR yes 8430862
chr3 187687519 187687530 CEBPB JASPAR yes 71102497
chr3 187687530 187687544 TCF7L2 JASPAR yes 8430863
chr3 187687530 187687544 TCF7L2 JASPAR yes 71102498
chr3 187687530 187687545 LEF1 JASPAR yes 8430864
chr3 187687530 187687545 LEF1 JASPAR yes 71102499
chr3 187687532 187687540 GATA3 JASPAR yes 8430865
chr3 187687532 187687540 GATA3 JASPAR yes 71102500
chr3 187687549 187687553 YY1 TRANSFAC yes 8430866
chr3 187687549 187687553 YY1 TRANSFAC yes 71102501
chr3 187687558 187687577 PAX5 JASPAR yes 8430867
chr3 187687558 187687577 PAX5 JASPAR yes 71102502
chr3 187687560 187687564 LFA1 TRANSFAC yes 8430868
chr3 187687560 187687564 LFA1 TRANSFAC yes 71102503
chr3 187687572 187687587 RUNX2 JASPAR yes 8430869
chr3 187687572 187687587 RUNX2 JASPAR yes 71102504
chr3 187687575 187687586 RUNX1 JASPAR yes 8430870
chr3 187687575 187687586 RUNX1 JASPAR yes 71102505
chr3 187687576 187687586 RUNX3 JASPAR yes 8430871
chr3 187687576 187687586 RUNX3 JASPAR yes 71102506
chr3 187687577 187687586 RUNX2 JASPAR yes 8430872
chr3 187687577 187687586 RUNX2 JASPAR yes 71102507
chr3 187687598 187687609 NRF1 JASPAR yes 8430873
chr3 187687598 187687609 NRF1 JASPAR yes 71102508
chr3 187687605 187687621 T JASPAR yes 8430874
chr3 187687605 187687621 T JASPAR yes 71102509
chr3 187687641 187687649 HOXA5 JASPAR yes 8430875
chr3 187687641 187687649 HOXA5 JASPAR yes 71102510
SNP sites on vista43525[chr3:187687318-187687647]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187687404 rs142595260 AG A no 7270530
chr3 187687459 rs79884616 G C,T
FOXA1 FOXO3 FOXP2 TP73
7270531
chr3 187687469 rs115395953 G A
FOXP2 TP73
7270532
Genes possibly regulated by vista43525[chr3:187687318-187687647]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43525[chr3:187687318-187687647]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 0.00015200208460001738 0.727449 0.599891 1214
Expression level of miRNAs
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