EnhancerDB
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  3. vista43533[chr3:187754201-187754558]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43533[chr3:187754201-187754558]
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Tissue distribution of vista43533
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Transcription factor that possibly regulate vista43533[chr3:187754201-187754558]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187754036 187754506 GATA3 UCSC Txn Factor no Conserved 108531342
chr3 187754113 187754420 NR3C1 UCSC Txn Factor no Conserved 108531343
chr3 187754130 187754587 TCF12 UCSC Txn Factor no Conserved 108531344
chr3 187754136 187754597 EP300 UCSC Txn Factor no Conserved 108531345
chr3 187754145 187754529 USF1 UCSC Txn Factor no Conserved 108531346
chr3 187754169 187754617 NFIC UCSC Txn Factor no Conserved 108531347
chr3 187754191 187754619 MYBL2 UCSC Txn Factor no Conserved 108531348
chr3 187754194 187754618 FOXA2 UCSC Txn Factor no Conserved 108531349
chr3 187754198 187754606 FOXA1 UCSC Txn Factor no Conserved 108531350
chr3 187754215 187754563 TEAD4 UCSC Txn Factor no Conserved 108531351
chr3 187754219 187754483 BHLHE40 UCSC Txn Factor no Conserved 108531352
chr3 187754236 187754510 RXRA UCSC Txn Factor no Conserved 108531353
chr3 187754192 187754202 NEUROG2 JASPAR yes 8439207
chr3 187754192 187754202 NEUROG2 JASPAR yes 71102770
chr3 187754197 187754212 TFAP2C JASPAR yes 8439208
chr3 187754197 187754212 TFAP2C JASPAR yes 71102771
chr3 187754199 187754211 TFAP2A JASPAR yes 8439209
chr3 187754199 187754211 TFAP2B JASPAR yes 8439210
chr3 187754199 187754211 TFAP2C JASPAR yes 8439211
chr3 187754199 187754211 TFAP2A JASPAR yes 71102772
chr3 187754199 187754211 TFAP2B JASPAR yes 71102773
chr3 187754199 187754211 TFAP2C JASPAR yes 71102774
chr3 187754199 187754214 TFAP2A JASPAR yes 8439212
chr3 187754199 187754214 TFAP2C JASPAR yes 8439213
chr3 187754199 187754214 TFAP2A JASPAR yes 71102775
chr3 187754199 187754214 TFAP2C JASPAR yes 71102776
chr3 187754200 187754211 TFAP2B JASPAR yes 8439214
chr3 187754200 187754211 TFAP2B JASPAR yes 71102777
chr3 187754206 187754221 AR JASPAR yes 8439215
chr3 187754206 187754221 AR JASPAR yes 71102778
chr3 187754206 187754223 NR3C1 JASPAR yes 8439216
chr3 187754206 187754223 NR3C2 JASPAR yes 8439217
chr3 187754206 187754223 NR3C1 JASPAR yes 71102779
chr3 187754206 187754223 NR3C2 JASPAR yes 71102780
chr3 187754208 187754223 AR JASPAR yes 8439218
chr3 187754208 187754223 AR JASPAR yes 71102781
chr3 187754230 187754251 REST JASPAR yes 8439219
chr3 187754230 187754251 REST JASPAR yes 71102782
chr3 187754272 187754287 STAT1 JASPAR yes 8439220
chr3 187754272 187754287 STAT1 JASPAR yes 71102783
chr3 187754274 187754285 STAT1 JASPAR yes 8439221
chr3 187754274 187754285 STAT3 JASPAR yes 8439222
chr3 187754274 187754285 STAT1 JASPAR yes 71102784
chr3 187754274 187754285 STAT3 JASPAR yes 71102785
chr3 187754313 187754322 TFAP2A JASPAR yes 8439223
chr3 187754313 187754322 TFAP2A JASPAR yes 71102786
chr3 187754326 187754337 NFE2 JASPAR yes 8439224
chr3 187754326 187754337 NFE2 JASPAR yes 71102787
chr3 187754327 187754341 RORA JASPAR yes 8439225
chr3 187754327 187754341 RORA JASPAR yes 71102788
chr3 187754328 187754338 RORA JASPAR yes 8439226
chr3 187754328 187754338 RORA JASPAR yes 71102789
chr3 187754333 187754337 YY1 TRANSFAC yes 8439227
chr3 187754333 187754337 YY1 TRANSFAC yes 71102790
chr3 187754344 187754365 REST JASPAR yes 8439228
chr3 187754344 187754365 REST JASPAR yes 71102791
chr3 187754347 187754362 HNF4G JASPAR yes 8439229
chr3 187754347 187754362 HNF4G JASPAR yes 71102792
chr3 187754348 187754363 HNF4A JASPAR yes 8439230
chr3 187754348 187754363 HNF4A JASPAR yes 71102793
chr3 187754361 187754371 RORA JASPAR yes 8439231
chr3 187754361 187754371 RORA JASPAR yes 71102794
chr3 187754362 187754373 ESRRA JASPAR yes 8439232
chr3 187754362 187754373 ESRRB JASPAR yes 8439233
chr3 187754362 187754373 ESRRA JASPAR yes 71102795
chr3 187754362 187754373 ESRRB JASPAR yes 71102796
chr3 187754364 187754372 NR4A2 JASPAR yes 8439234
chr3 187754364 187754372 NR4A2 JASPAR yes 71102797
chr3 187754366 187754370 ESR1 TRANSFAC yes 8439235
chr3 187754366 187754370 ESR1 TRANSFAC yes 71102798
chr3 187754382 187754386 YY1 TRANSFAC yes 8439236
chr3 187754382 187754386 YY1 TRANSFAC yes 71102799
chr3 187754404 187754411 SPIB JASPAR yes 8439237
chr3 187754404 187754411 SPIB JASPAR yes 71102800
chr3 187754412 187754427 RFX5 JASPAR yes 8439238
chr3 187754412 187754427 RFX5 JASPAR yes 71102801
chr3 187754424 187754430 GATA3 JASPAR yes 8439239
chr3 187754424 187754430 GATA3 JASPAR yes 71102802
chr3 187754437 187754450 POU3F3 JASPAR yes 8439240
chr3 187754437 187754450 POU3F3 JASPAR yes 71102803
chr3 187754438 187754449 FOXB1 JASPAR yes 8439241
chr3 187754438 187754449 FOXC1 JASPAR yes 8439242
chr3 187754438 187754449 FOXB1 JASPAR yes 71102804
chr3 187754438 187754449 FOXC1 JASPAR yes 71102805
chr3 187754438 187754450 FOXC2 JASPAR yes 8439243
chr3 187754438 187754450 FOXC2 JASPAR yes 71102806
chr3 187754440 187754444 TEAD2 TRANSFAC yes 8439244
chr3 187754440 187754444 TEAD2 TRANSFAC yes 71102807
chr3 187754440 187754445 TBP TRANSFAC yes 8439245
chr3 187754440 187754445 TBP TRANSFAC yes 71102808
chr3 187754440 187754446 TMF TRANSFAC yes 8439246
chr3 187754440 187754446 TMF TRANSFAC yes 71102809
chr3 187754462 187754469 MEIS1 JASPAR yes 8439247
chr3 187754462 187754469 MEIS1 JASPAR yes 71102810
chr3 187754462 187754470 MEIS2 JASPAR yes 8439248
chr3 187754462 187754470 MEIS3 JASPAR yes 8439249
chr3 187754462 187754470 MEIS2 JASPAR yes 71102811
chr3 187754462 187754470 MEIS3 JASPAR yes 71102812
chr3 187754465 187754480 IRF9 JASPAR yes 8439250
chr3 187754465 187754480 IRF9 JASPAR yes 71102813
chr3 187754466 187754480 IRF7 JASPAR yes 8439251
chr3 187754466 187754480 IRF8 JASPAR yes 8439252
chr3 187754466 187754480 IRF7 JASPAR yes 71102814
chr3 187754466 187754480 IRF8 JASPAR yes 71102815
chr3 187754484 187754490 SOX10 JASPAR yes 8439253
chr3 187754484 187754490 SOX10 JASPAR yes 71102816
chr3 187754509 187754521 GLI2 JASPAR yes 8439254
chr3 187754509 187754521 GLI2 JASPAR yes 71102817
chr3 187754510 187754522 ZBTB7A JASPAR yes 8439255
chr3 187754510 187754522 ZBTB7A JASPAR yes 71102818
chr3 187754515 187754519 H4TF2 TRANSFAC yes 8439256
chr3 187754515 187754519 H4TF2 TRANSFAC yes 71102819
SNP sites on vista43533[chr3:187754201-187754558]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187754214 rs11718183 G T
AR EP300 FOXA1 FOXA2 GATA3 MYBL2 NFIC NR3C1 NR3C2 TCF12 TFAP2A TFAP2C USF1
7271390
chr3 187754266 rs113653376 A G
BHLHE40 EP300 FOXA1 FOXA2 GATA3 MYBL2 NFIC NR3C1 RXRA TCF12 TEAD4 USF1
7271391
chr3 187754436 rs10937334 T A,C
BHLHE40 EP300 FOXA1 FOXA2 GATA3 MYBL2 NFIC RXRA TCF12 TEAD4 USF1
7271392
chr3 187754443 rs183781999 T C
BHLHE40 EP300 FOXA1 FOXA2 FOXB1 FOXC1 FOXC2 GATA3 MYBL2 NFIC POU3F3 RXRA TBP TCF12 TEAD2 TEAD4 TMF USF1
7271393
Genes possibly regulated by vista43533[chr3:187754201-187754558]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43533[chr3:187754201-187754558]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 0.00023868179454612098 0.727449 0.599891 1214
Expression level of miRNAs
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