EnhancerDB
  1. Home
  2. Enhancers
  3. vista43535[chr3:187841029-187841328]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43535[chr3:187841029-187841328]
Back to top
Tissue distribution of vista43535
Back to top
Transcription factor that possibly regulate vista43535[chr3:187841029-187841328]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187840935 187841215 FOXA1 UCSC Txn Factor no Conserved 108531354
chr3 187840935 187841223 FOXA2 UCSC Txn Factor no Conserved 108531355
chr3 187840936 187841234 EP300 UCSC Txn Factor no Conserved 108531356
chr3 187841020 187841040 ESR1 JASPAR yes 8447657
chr3 187841020 187841040 ESR1 JASPAR yes 71102882
chr3 187841027 187841038 USF2 JASPAR yes 8447658
chr3 187841027 187841038 USF2 JASPAR yes 71102883
chr3 187841028 187841035 USF2 TRANSFAC yes 8447659
chr3 187841028 187841035 USF2 TRANSFAC yes 71102884
chr3 187841028 187841038 SREBF2 JASPAR yes 8447660
chr3 187841028 187841038 SREBF2 JASPAR yes 71102885
chr3 187841030 187841035 USF2 TRANSFAC yes 8447661
chr3 187841030 187841035 USF2 TRANSFAC yes 71102886
chr3 187841040 187841051 FOXA1 JASPAR yes 8447662
chr3 187841040 187841051 FOXA1 JASPAR yes 71102887
chr3 187841040 187841055 FOXA1 JASPAR yes 8447663
chr3 187841040 187841055 FOXA1 JASPAR yes 71102888
chr3 187841041 187841052 FOXC1 JASPAR yes 8447664
chr3 187841041 187841052 FOXC1 JASPAR yes 71102889
chr3 187841042 187841047 GATA2 JASPAR yes 8447665
chr3 187841042 187841047 GATA2 JASPAR yes 71102890
chr3 187841044 187841052 FOXG1 JASPAR yes 8447666
chr3 187841044 187841052 FOXG1 JASPAR yes 71102891
chr3 187841046 187841058 YY1 JASPAR yes 8447667
chr3 187841046 187841058 YY1 JASPAR yes 71102892
chr3 187841059 187841070 STAT3 JASPAR yes 8447668
chr3 187841059 187841070 STAT3 JASPAR yes 71102893
chr3 187841063 187841071 FEV JASPAR yes 8447669
chr3 187841063 187841071 FEV JASPAR yes 71102894
chr3 187841074 187841088 SPIC JASPAR yes 8447670
chr3 187841074 187841088 SPIC JASPAR yes 71102895
chr3 187841082 187841093 FOXB1 JASPAR yes 8447671
chr3 187841082 187841093 FOXC1 JASPAR yes 8447672
chr3 187841082 187841093 FOXB1 JASPAR yes 71102896
chr3 187841082 187841093 FOXC1 JASPAR yes 71102897
chr3 187841093 187841107 TCF7L2 JASPAR yes 8447673
chr3 187841093 187841107 TCF7L2 JASPAR yes 71102898
chr3 187841093 187841108 LEF1 JASPAR yes 8447674
chr3 187841093 187841108 LEF1 JASPAR yes 71102899
chr3 187841094 187841108 RXRG JASPAR yes 8447675
chr3 187841094 187841108 RXRG JASPAR yes 71102900
chr3 187841094 187841109 HNF4A JASPAR yes 8447676
chr3 187841094 187841109 HNF4A JASPAR yes 71102901
chr3 187841099 187841110 ESRRA JASPAR yes 8447677
chr3 187841099 187841110 ESRRA JASPAR yes 71102902
chr3 187841099 187841112 NR2F1 JASPAR yes 8447678
chr3 187841099 187841112 NR2F1 JASPAR yes 71102903
chr3 187841101 187841109 NR4A2 JASPAR yes 8447679
chr3 187841101 187841109 NR4A2 JASPAR yes 71102904
chr3 187841103 187841107 ESR1 TRANSFAC yes 8447680
chr3 187841103 187841107 ESR1 TRANSFAC yes 71102905
chr3 187841106 187841115 ZEB1 JASPAR yes 8447681
chr3 187841106 187841115 ZEB1 JASPAR yes 71102906
chr3 187841116 187841120 NFE TRANSFAC yes 8447682
chr3 187841116 187841120 NFE TRANSFAC yes 71102907
chr3 187841121 187841136 FOXA1 JASPAR yes 8447683
chr3 187841121 187841136 FOXA1 JASPAR yes 71102908
chr3 187841123 187841135 FOXC2 JASPAR yes 8447684
chr3 187841123 187841135 FOXC2 JASPAR yes 71102909
chr3 187841124 187841135 FOXB1 JASPAR yes 8447685
chr3 187841124 187841135 FOXC1 JASPAR yes 8447686
chr3 187841124 187841135 FOXB1 JASPAR yes 71102910
chr3 187841124 187841135 FOXC1 JASPAR yes 71102911
chr3 187841125 187841136 FOXA1 JASPAR yes 8447687
chr3 187841125 187841136 FOXA1 JASPAR yes 71102912
chr3 187841159 187841170 FLI1 JASPAR yes 8447688
chr3 187841159 187841170 FLI1 JASPAR yes 71102913
chr3 187841159 187841180 ZNF263 JASPAR yes 8447689
chr3 187841159 187841180 ZNF263 JASPAR yes 71102914
chr3 187841160 187841164 YY1 TRANSFAC yes 8447690
chr3 187841160 187841164 YY1 TRANSFAC yes 71102915
chr3 187841161 187841169 FEV JASPAR yes 8447691
chr3 187841161 187841169 FEV JASPAR yes 71102916
chr3 187841163 187841168 ETS2 TRANSFAC yes 8447692
chr3 187841163 187841168 ETS2 TRANSFAC yes 71102917
chr3 187841164 187841178 SPI1 JASPAR yes 8447693
chr3 187841164 187841178 SPIC JASPAR yes 8447694
chr3 187841164 187841178 SPI1 JASPAR yes 71102918
chr3 187841164 187841178 SPIC JASPAR yes 71102919
chr3 187841165 187841173 EHF JASPAR yes 8447695
chr3 187841165 187841173 EHF JASPAR yes 71102920
chr3 187841233 187841243 BHLHE22 JASPAR yes 8447696
chr3 187841233 187841243 OLIG3 JASPAR yes 8447697
chr3 187841233 187841243 BHLHE22 JASPAR yes 71102921
chr3 187841233 187841243 OLIG3 JASPAR yes 71102922
chr3 187841241 187841256 PRDM1 JASPAR yes 8447698
chr3 187841241 187841256 PRDM1 JASPAR yes 71102923
chr3 187841250 187841266 ZNF143 JASPAR yes 8447699
chr3 187841250 187841266 ZNF143 JASPAR yes 71102924
chr3 187841260 187841271 ESRRB JASPAR yes 8447700
chr3 187841260 187841271 ESRRB JASPAR yes 71102925
chr3 187841305 187841323 ESR1 JASPAR yes 8447701
chr3 187841305 187841323 ESR1 JASPAR yes 71102926
SNP sites on vista43535[chr3:187841029-187841328]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187841125 rs143549083 A G
EP300 FOXA1 FOXA2 FOXB1 FOXC1 FOXC2
7272264
chr3 187841142 rs138054007 A C
EP300 FOXA1 FOXA2
7272265
chr3 187841169 rs79096151 T C
EHF EP300 FEV FLI1 FOXA1 FOXA2 SPI1 SPIC ZNF263
7272266
chr3 187841175 rs190204291 T C
EP300 FOXA1 FOXA2 SPI1 SPIC ZNF263
7272267
chr3 187841254 rs16863021 C T
PRDM1 ZNF143
7272268
chr3 187841267 rs142838835 T C
ESRRB
7272269
chr3 187841299 rs76221806 G A,T no 7272270
Genes possibly regulated by vista43535[chr3:187841029-187841328]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187871072 188608460 + LPP ENSG00000145012.8 187871072 0.96 0.99 4370 70256
chr3 187896331 187898598 + AC022498.1 ENSG00000213132.2 187896331 0.88 0.99 4371 44997
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43535[chr3:187841029-187841328]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 188406622 188406643 + hsa-miR-28-3p MIMAT0004502 187871718 0.0009176717357105401 0.727449 0.599891 1214
Expression level of miRNAs
Back to top