EnhancerDB
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  3. vista43538[chr3:187901313-187901616]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43538[chr3:187901313-187901616]
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Tissue distribution of vista43538
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Transcription factor that possibly regulate vista43538[chr3:187901313-187901616]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187901320 187901331 NFE2 JASPAR yes 8453021
chr3 187901320 187901331 NFE2 JASPAR yes 71102988
chr3 187901321 187901330 JDP2 JASPAR yes 8453022
chr3 187901321 187901330 JDP2 JASPAR yes 71102989
chr3 187901328 187901338 TFAP4 JASPAR yes 8453023
chr3 187901328 187901338 TFAP4 JASPAR yes 71102990
chr3 187901342 187901348 TCF1 TRANSFAC yes 8453024
chr3 187901342 187901348 TCF1 TRANSFAC yes 71102991
chr3 187901356 187901376 ESR1 JASPAR yes 8453025
chr3 187901356 187901376 ESR1 JASPAR yes 71102992
chr3 187901359 187901379 PPARG JASPAR yes 8453026
chr3 187901359 187901379 PPARG JASPAR yes 71102993
chr3 187901360 187901378 ESR1 JASPAR yes 8453027
chr3 187901360 187901378 ESR1 JASPAR yes 71102994
chr3 187901361 187901376 ESR2 JASPAR yes 8453028
chr3 187901361 187901376 ESR2 JASPAR yes 71102995
chr3 187901361 187901378 RXRA JASPAR yes 8453029
chr3 187901361 187901378 RXRA JASPAR yes 71102996
chr3 187901362 187901366 LFA1 TRANSFAC yes 8453030
chr3 187901362 187901366 LFA1 TRANSFAC yes 71102997
chr3 187901389 187901399 TBX21 JASPAR yes 8453031
chr3 187901389 187901399 TBX21 JASPAR yes 71102998
chr3 187901389 187901400 TBX20 JASPAR yes 8453032
chr3 187901389 187901400 TBX2 JASPAR yes 8453033
chr3 187901389 187901400 TBX20 JASPAR yes 71102999
chr3 187901389 187901400 TBX2 JASPAR yes 71103000
chr3 187901389 187901402 EOMES JASPAR yes 8453034
chr3 187901389 187901402 EOMES JASPAR yes 71103001
chr3 187901390 187901398 MGA JASPAR yes 8453035
chr3 187901390 187901398 TBX15 JASPAR yes 8453036
chr3 187901390 187901398 TBX1 JASPAR yes 8453037
chr3 187901390 187901398 TBX4 JASPAR yes 8453038
chr3 187901390 187901398 TBX5 JASPAR yes 8453039
chr3 187901390 187901398 MGA JASPAR yes 71103002
chr3 187901390 187901398 TBX15 JASPAR yes 71103003
chr3 187901390 187901398 TBX1 JASPAR yes 71103004
chr3 187901390 187901398 TBX4 JASPAR yes 71103005
chr3 187901390 187901398 TBX5 JASPAR yes 71103006
chr3 187901404 187901411 GATA1 TRANSFAC yes 8453040
chr3 187901404 187901411 GATA1 TRANSFAC yes 71103007
chr3 187901405 187901419 CREB3 JASPAR yes 8453041
chr3 187901405 187901419 CREB3L1 JASPAR yes 8453042
chr3 187901405 187901419 CREB3 JASPAR yes 71103008
chr3 187901405 187901419 CREB3L1 JASPAR yes 71103009
chr3 187901406 187901420 XBP1 JASPAR yes 8453043
chr3 187901406 187901420 XBP1 JASPAR yes 71103010
chr3 187901424 187901442 RARA JASPAR yes 8453044
chr3 187901424 187901442 RARA JASPAR yes 71103011
chr3 187901430 187901440 EMX1 JASPAR yes 8453045
chr3 187901430 187901440 EVX2 JASPAR yes 8453046
chr3 187901430 187901440 EMX1 JASPAR yes 71103012
chr3 187901430 187901440 EVX2 JASPAR yes 71103013
chr3 187901441 187901453 PKNOX1 JASPAR yes 8453047
chr3 187901441 187901453 PKNOX2 JASPAR yes 8453048
chr3 187901441 187901453 TGIF1 JASPAR yes 8453049
chr3 187901441 187901453 TGIF2 JASPAR yes 8453050
chr3 187901441 187901453 PKNOX1 JASPAR yes 71103014
chr3 187901441 187901453 PKNOX2 JASPAR yes 71103015
chr3 187901441 187901453 TGIF1 JASPAR yes 71103016
chr3 187901441 187901453 TGIF2 JASPAR yes 71103017
chr3 187901451 187901455 YY1 TRANSFAC yes 8453051
chr3 187901451 187901455 YY1 TRANSFAC yes 71103018
chr3 187901486 187901500 JUN JASPAR yes 8453052
chr3 187901486 187901500 JUN JASPAR yes 71103019
chr3 187901487 187901493 JUN TRANSFAC yes 8453053
chr3 187901487 187901493 JUN TRANSFAC yes 71103020
chr3 187901492 187901496 YY1 TRANSFAC yes 8453054
chr3 187901492 187901496 YY1 TRANSFAC yes 71103021
chr3 187901492 187901502 ERF JASPAR yes 8453055
chr3 187901492 187901502 ERF JASPAR yes 71103022
chr3 187901492 187901507 STAT1 JASPAR yes 8453056
chr3 187901492 187901507 STAT1 JASPAR yes 71103023
chr3 187901493 187901501 FEV JASPAR yes 8453057
chr3 187901493 187901501 FEV JASPAR yes 71103024
chr3 187901494 187901505 STAT1 JASPAR yes 8453058
chr3 187901494 187901505 STAT1 JASPAR yes 71103025
chr3 187901509 187901512 MYB TRANSFAC yes 8453059
chr3 187901509 187901512 MYB TRANSFAC yes 71103026
chr3 187901517 187901527 SP1 JASPAR yes 8453060
chr3 187901517 187901527 SP1 JASPAR yes 71103027
chr3 187901518 187901538 RREB1 JASPAR yes 8453061
chr3 187901518 187901538 RREB1 JASPAR yes 71103028
chr3 187901519 187901525 MAZ TRANSFAC yes 8453062
chr3 187901519 187901525 MAZ TRANSFAC yes 71103029
chr3 187901520 187901541 ZNF263 JASPAR yes 8453063
chr3 187901520 187901541 ZNF263 JASPAR yes 71103030
chr3 187901521 187901531 ZNF740 JASPAR yes 8453064
chr3 187901521 187901531 ZNF740 JASPAR yes 71103031
chr3 187901522 187901542 RREB1 JASPAR yes 8453065
chr3 187901522 187901542 RREB1 JASPAR yes 71103032
chr3 187901523 187901544 ZNF263 JASPAR yes 8453066
chr3 187901523 187901544 ZNF263 JASPAR yes 71103033
chr3 187901524 187901544 RREB1 JASPAR yes 8453067
chr3 187901524 187901544 RREB1 JASPAR yes 71103034
chr3 187901525 187901539 PLAG1 JASPAR yes 8453068
chr3 187901525 187901539 PLAG1 JASPAR yes 71103035
chr3 187901526 187901531 SP1 TRANSFAC yes 8453069
chr3 187901526 187901531 SP1 TRANSFAC yes 71103036
chr3 187901533 187901543 SP1 JASPAR yes 8453070
chr3 187901533 187901543 ZNF740 JASPAR yes 8453071
chr3 187901533 187901543 SP1 JASPAR yes 71103037
chr3 187901533 187901543 ZNF740 JASPAR yes 71103038
chr3 187901534 187901554 RREB1 JASPAR yes 8453072
chr3 187901534 187901554 RREB1 JASPAR yes 71103039
chr3 187901535 187901541 MAZ TRANSFAC yes 8453073
chr3 187901535 187901541 MAZ TRANSFAC yes 71103040
chr3 187901549 187901554 TFAP2A TRANSFAC yes 8453074
chr3 187901549 187901554 TFAP2A TRANSFAC yes 71103041
chr3 187901549 187901555 MZF1 JASPAR yes 8453075
chr3 187901549 187901555 MZF1 JASPAR yes 71103042
chr3 187901556 187901566 HOXA13 JASPAR yes 8453076
chr3 187901556 187901566 HOXB13 JASPAR yes 8453077
chr3 187901556 187901566 HOXD13 JASPAR yes 8453078
chr3 187901556 187901566 HOXA13 JASPAR yes 71103043
chr3 187901556 187901566 HOXB13 JASPAR yes 71103044
chr3 187901556 187901566 HOXD13 JASPAR yes 71103045
chr3 187901556 187901567 HOXA10 JASPAR yes 8453079
chr3 187901556 187901567 HOXD12 JASPAR yes 8453080
chr3 187901556 187901567 HOXA10 JASPAR yes 71103046
chr3 187901556 187901567 HOXD12 JASPAR yes 71103047
chr3 187901557 187901566 CDX1 JASPAR yes 8453081
chr3 187901557 187901566 CDX1 JASPAR yes 71103048
chr3 187901557 187901568 CDX2 JASPAR yes 8453082
chr3 187901557 187901568 CDX2 JASPAR yes 71103049
chr3 187901564 187901582 SRF JASPAR yes 8453083
chr3 187901564 187901582 SRF JASPAR yes 71103050
chr3 187901571 187901580 NKX3-2 JASPAR yes 8453084
chr3 187901571 187901580 NKX3-2 JASPAR yes 71103051
chr3 187901601 187901613 PBX1 JASPAR yes 8453085
chr3 187901601 187901613 PBX1 JASPAR yes 71103052
chr3 187901607 187901622 HNF4G JASPAR yes 8453086
chr3 187901607 187901622 HNF4G JASPAR yes 71103053
chr3 187901608 187901622 NR2F1 JASPAR yes 8453087
chr3 187901608 187901622 NR2F1 JASPAR yes 71103054
chr3 187901608 187901623 HNF4A JASPAR yes 8453088
chr3 187901608 187901623 HNF4A JASPAR yes 71103055
SNP sites on vista43538[chr3:187901313-187901616]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187901562 rs9863914 A G
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD12 HOXD13
7272788
chr3 187901588 rs138775684 G C no 7272789
Genes possibly regulated by vista43538[chr3:187901313-187901616]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187871072 188608460 + LPP ENSG00000145012.8 187871072 0.96 0.99 4370 69759
chr3 187896331 187898598 + AC022498.1 ENSG00000213132.2 187896331 0.88 0.99 4371 95018
Expression level of Genes
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miRNAs possibly regulated by vista43538[chr3:187901313-187901616]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results