EnhancerDB
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  3. vista43540[chr3:187912287-187912441]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43540[chr3:187912287-187912441]
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Tissue distribution of vista43540
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Transcription factor that possibly regulate vista43540[chr3:187912287-187912441]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187912292 187912312 TP63 JASPAR yes 8454792
chr3 187912292 187912312 TP63 JASPAR yes 71103159
chr3 187912301 187912305 NFE TRANSFAC yes 8454793
chr3 187912301 187912305 NFE TRANSFAC yes 71103160
chr3 187912302 187912307 GATA2 JASPAR yes 8454794
chr3 187912302 187912307 GATA2 JASPAR yes 71103161
chr3 187912315 187912318 MYB TRANSFAC yes 8454795
chr3 187912315 187912318 MYB TRANSFAC yes 71103162
chr3 187912322 187912343 MAFG JASPAR yes 8454796
chr3 187912322 187912343 MAFG JASPAR yes 71103163
chr3 187912323 187912337 JUN JASPAR yes 8454797
chr3 187912323 187912337 JUN JASPAR yes 71103164
chr3 187912325 187912336 BATF JASPAR yes 8454798
chr3 187912325 187912336 BATF JASPAR yes 71103165
chr3 187912326 187912337 FOSL2 JASPAR yes 8454799
chr3 187912326 187912337 JUNB JASPAR yes 8454800
chr3 187912326 187912337 FOSL2 JASPAR yes 71103166
chr3 187912326 187912337 JUNB JASPAR yes 71103167
chr3 187912327 187912338 FOS JASPAR yes 8454801
chr3 187912327 187912338 FOSL1 JASPAR yes 8454802
chr3 187912327 187912338 JUND JASPAR yes 8454803
chr3 187912327 187912338 NFE2 JASPAR yes 8454804
chr3 187912327 187912338 FOS JASPAR yes 71103168
chr3 187912327 187912338 FOSL1 JASPAR yes 71103169
chr3 187912327 187912338 JUND JASPAR yes 71103170
chr3 187912327 187912338 NFE2 JASPAR yes 71103171
chr3 187912328 187912337 JDP2 JASPAR yes 8454805
chr3 187912328 187912337 JDP2 JASPAR yes 71103172
chr3 187912341 187912359 IRF2 JASPAR yes 8454806
chr3 187912341 187912359 IRF2 JASPAR yes 71103173
chr3 187912342 187912363 IRF1 JASPAR yes 8454807
chr3 187912342 187912363 IRF1 JASPAR yes 71103174
chr3 187912344 187912359 PRDM1 JASPAR yes 8454808
chr3 187912344 187912359 STAT2 JASPAR yes 8454809
chr3 187912344 187912359 PRDM1 JASPAR yes 71103175
chr3 187912344 187912359 STAT2 JASPAR yes 71103176
chr3 187912345 187912359 STAT1 JASPAR yes 8454810
chr3 187912345 187912359 STAT1 JASPAR yes 71103177
chr3 187912346 187912360 IRF7 JASPAR yes 8454811
chr3 187912346 187912360 IRF8 JASPAR yes 8454812
chr3 187912346 187912360 IRF7 JASPAR yes 71103178
chr3 187912346 187912360 IRF8 JASPAR yes 71103179
chr3 187912346 187912361 IRF9 JASPAR yes 8454813
chr3 187912346 187912361 IRF9 JASPAR yes 71103180
chr3 187912373 187912383 RUNX3 JASPAR yes 8454814
chr3 187912373 187912383 RUNX3 JASPAR yes 71103181
chr3 187912396 187912417 ZNF263 JASPAR yes 8454815
chr3 187912396 187912417 ZNF263 JASPAR yes 71103182
chr3 187912398 187912403 ETS2 TRANSFAC yes 8454816
chr3 187912398 187912403 ETS2 TRANSFAC yes 71103183
chr3 187912406 187912411 ETS2 TRANSFAC yes 8454817
chr3 187912406 187912411 ETS2 TRANSFAC yes 71103184
chr3 187912412 187912416 TEAD2 TRANSFAC yes 8454818
chr3 187912412 187912416 TEAD2 TRANSFAC yes 71103185
chr3 187912413 187912423 POU6F2 JASPAR yes 8454819
chr3 187912413 187912423 POU6F2 JASPAR yes 71103186
chr3 187912431 187912446 FOXA1 JASPAR yes 8454820
chr3 187912431 187912446 FOXA1 JASPAR yes 71103187
chr3 187912433 187912445 FOXC2 JASPAR yes 8454821
chr3 187912433 187912445 FOXC2 JASPAR yes 71103188
chr3 187912434 187912445 FOXB1 JASPAR yes 8454822
chr3 187912434 187912445 FOXC1 JASPAR yes 8454823
chr3 187912434 187912445 FOXB1 JASPAR yes 71103189
chr3 187912434 187912445 FOXC1 JASPAR yes 71103190
chr3 187912441 187912445 YY1 TRANSFAC yes 8454824
chr3 187912441 187912445 YY1 TRANSFAC yes 71103191
SNP sites on vista43540[chr3:187912287-187912441]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187912292 rs4686938 G T
TP63
7272912
chr3 187912305 rs543671452 T C
GATA2 NFE TP63
7272913
chr3 187912388 rs4686478 G A no 7272914
chr3 187912422 rs531133246 G A
POU6F2
7272915
Genes possibly regulated by vista43540[chr3:187912287-187912441]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187871072 188608460 + LPP ENSG00000145012.8 187871072 0.96 0.99 4370 58785
chr3 187896331 187898598 + AC022498.1 ENSG00000213132.2 187896331 0.88 0.99 4371 84044
Expression level of Genes
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miRNAs possibly regulated by vista43540[chr3:187912287-187912441]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results