EnhancerDB
  1. Home
  2. Enhancers
  3. vista43541[chr3:187948643-187949049]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43541[chr3:187948643-187949049]
Back to top
Tissue distribution of vista43541
Back to top
Transcription factor that possibly regulate vista43541[chr3:187948643-187949049]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187948629 187948643 TLX1 JASPAR yes 8459225
chr3 187948629 187948643 TLX1 JASPAR yes 71103192
chr3 187948664 187948677 ZBTB18 JASPAR yes 8459226
chr3 187948664 187948677 ZBTB18 JASPAR yes 71103193
chr3 187948666 187948676 FIGLA JASPAR yes 8459227
chr3 187948666 187948676 ID4 JASPAR yes 8459228
chr3 187948666 187948676 TCF3 JASPAR yes 8459229
chr3 187948666 187948676 TCF4 JASPAR yes 8459230
chr3 187948666 187948676 FIGLA JASPAR yes 71103194
chr3 187948666 187948676 ID4 JASPAR yes 71103195
chr3 187948666 187948676 TCF3 JASPAR yes 71103196
chr3 187948666 187948676 TCF4 JASPAR yes 71103197
chr3 187948684 187948695 NFE2L2 JASPAR yes 8459231
chr3 187948684 187948695 NFE2L2 JASPAR yes 71103198
chr3 187948691 187948701 ELK1 JASPAR yes 8459232
chr3 187948691 187948701 ELK1 JASPAR yes 71103199
chr3 187948693 187948703 ELK1 JASPAR yes 8459233
chr3 187948693 187948703 ELK3 JASPAR yes 8459234
chr3 187948693 187948703 ERF JASPAR yes 8459235
chr3 187948693 187948703 ERG JASPAR yes 8459236
chr3 187948693 187948703 ETV1 JASPAR yes 8459237
chr3 187948693 187948703 ETV4 JASPAR yes 8459238
chr3 187948693 187948703 ETV5 JASPAR yes 8459239
chr3 187948693 187948703 FEV JASPAR yes 8459240
chr3 187948693 187948703 FLI1 JASPAR yes 8459241
chr3 187948693 187948703 GABPA JASPAR yes 8459242
chr3 187948693 187948703 ELK1 JASPAR yes 71103200
chr3 187948693 187948703 ELK3 JASPAR yes 71103201
chr3 187948693 187948703 ERF JASPAR yes 71103202
chr3 187948693 187948703 ERG JASPAR yes 71103203
chr3 187948693 187948703 ETV1 JASPAR yes 71103204
chr3 187948693 187948703 ETV4 JASPAR yes 71103205
chr3 187948693 187948703 ETV5 JASPAR yes 71103206
chr3 187948693 187948703 FEV JASPAR yes 71103207
chr3 187948693 187948703 FLI1 JASPAR yes 71103208
chr3 187948693 187948703 GABPA JASPAR yes 71103209
chr3 187948695 187948701 ETS1 JASPAR yes 8459243
chr3 187948695 187948701 SPI1 JASPAR yes 8459244
chr3 187948695 187948701 ETS1 JASPAR yes 71103210
chr3 187948695 187948701 SPI1 JASPAR yes 71103211
chr3 187948712 187948717 ETS2 TRANSFAC yes 8459245
chr3 187948712 187948717 ETS2 TRANSFAC yes 71103212
chr3 187948737 187948753 ZNF143 JASPAR yes 8459246
chr3 187948737 187948753 ZNF143 JASPAR yes 71103213
chr3 187948750 187948756 NFIC JASPAR yes 8459247
chr3 187948750 187948756 NFIC JASPAR yes 71103214
chr3 187948765 187948771 MZF1 JASPAR yes 8459248
chr3 187948765 187948771 MZF1 JASPAR yes 71103215
chr3 187948822 187948826 LFA1 TRANSFAC yes 8459249
chr3 187948822 187948826 LFA1 TRANSFAC yes 71103216
chr3 187948827 187948838 USF2 JASPAR yes 8459250
chr3 187948827 187948838 USF2 JASPAR yes 71103217
chr3 187948834 187948846 PKNOX1 JASPAR yes 8459251
chr3 187948834 187948846 PKNOX2 JASPAR yes 8459252
chr3 187948834 187948846 TGIF2 JASPAR yes 8459253
chr3 187948834 187948846 PKNOX1 JASPAR yes 71103218
chr3 187948834 187948846 PKNOX2 JASPAR yes 71103219
chr3 187948834 187948846 TGIF2 JASPAR yes 71103220
chr3 187948835 187948845 NHLH1 JASPAR yes 8459254
chr3 187948835 187948845 NHLH1 JASPAR yes 71103221
chr3 187948852 187948863 BATF JASPAR yes 8459255
chr3 187948852 187948863 BATF JASPAR yes 71103222
chr3 187948855 187948866 NFE2L2 JASPAR yes 8459256
chr3 187948855 187948866 NFE2L2 JASPAR yes 71103223
chr3 187948862 187948877 PRDM1 JASPAR yes 8459257
chr3 187948862 187948877 PRDM1 JASPAR yes 71103224
chr3 187948874 187948887 TFAP2B JASPAR yes 8459258
chr3 187948874 187948887 TFAP2B JASPAR yes 71103225
chr3 187948897 187948907 HOXA13 JASPAR yes 8459259
chr3 187948897 187948907 HOXB13 JASPAR yes 8459260
chr3 187948897 187948907 HOXD13 JASPAR yes 8459261
chr3 187948897 187948907 HOXA13 JASPAR yes 71103226
chr3 187948897 187948907 HOXB13 JASPAR yes 71103227
chr3 187948897 187948907 HOXD13 JASPAR yes 71103228
chr3 187948897 187948908 HOXC13 JASPAR yes 8459262
chr3 187948897 187948908 HOXC13 JASPAR yes 71103229
chr3 187948901 187948905 TEAD2 TRANSFAC yes 8459263
chr3 187948901 187948905 TEAD2 TRANSFAC yes 71103230
chr3 187948906 187948915 PITX3 JASPAR yes 8459264
chr3 187948906 187948915 PITX3 JASPAR yes 71103231
chr3 187948907 187948915 OTX1 JASPAR yes 8459265
chr3 187948907 187948915 OTX2 JASPAR yes 8459266
chr3 187948907 187948915 OTX1 JASPAR yes 71103232
chr3 187948907 187948915 OTX2 JASPAR yes 71103233
chr3 187948918 187948935 NR3C1 JASPAR yes 8459267
chr3 187948918 187948935 NR3C2 JASPAR yes 8459268
chr3 187948918 187948935 NR3C1 JASPAR yes 71103234
chr3 187948918 187948935 NR3C2 JASPAR yes 71103235
chr3 187948920 187948935 AR JASPAR yes 8459269
chr3 187948920 187948935 AR JASPAR yes 71103236
chr3 187948929 187948950 ZNF263 JASPAR yes 8459270
chr3 187948929 187948950 ZNF263 JASPAR yes 71103237
chr3 187948932 187948953 ZNF263 JASPAR yes 8459271
chr3 187948932 187948953 ZNF263 JASPAR yes 71103238
chr3 187948947 187948957 HOXD11 JASPAR yes 8459272
chr3 187948947 187948957 HOXD11 JASPAR yes 71103239
chr3 187948947 187948958 HOXC13 JASPAR yes 8459273
chr3 187948947 187948958 HOXC13 JASPAR yes 71103240
chr3 187948970 187948974 H4TF2 TRANSFAC yes 8459274
chr3 187948970 187948974 H4TF2 TRANSFAC yes 71103241
chr3 187948985 187949000 NR2C2 JASPAR yes 8459275
chr3 187948985 187949000 NR2C2 JASPAR yes 71103242
chr3 187948987 187948997 SP1 JASPAR yes 8459276
chr3 187948987 187948997 SP1 JASPAR yes 71103243
chr3 187948989 187948995 MAZ TRANSFAC yes 8459277
chr3 187948989 187948995 MAZ TRANSFAC yes 71103244
chr3 187948990 187949000 MZF1 JASPAR yes 8459278
chr3 187948990 187949000 MZF1 JASPAR yes 71103245
chr3 187949008 187949019 ESRRB JASPAR yes 8459279
chr3 187949008 187949019 ESRRB JASPAR yes 71103246
chr3 187949020 187949039 CTCF JASPAR yes 8459280
chr3 187949020 187949039 CTCF JASPAR yes 71103247
chr3 187949042 187949054 YY1 JASPAR yes 8459281
chr3 187949042 187949054 YY1 JASPAR yes 71103248
chr3 187949043 187949062 REST JASPAR yes 8459282
chr3 187949043 187949062 REST JASPAR yes 71103249
SNP sites on vista43541[chr3:187948643-187949049]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187948656 rs9834181 C T no 7273284
chr3 187948663 rs113399128 G A,T no 7273285
chr3 187948697 rs7626494 G A
ELK1 ELK3 ERF ERG ETS1 ETV1 ETV4 ETV5 FEV FLI1 GABPA SPI1
7273286
chr3 187948728 rs113601471 C A no 7273287
chr3 187948759 rs373115590 ATTTG A no 7273288
chr3 187948759 rs375978067 ATTTG A no 7273289
chr3 187948804 rs546847169 C A no 7273290
chr3 187948806 rs73057666 G A no 7273291
chr3 187948821 rs79996183 T C no 7273292
chr3 187948835 rs184759668 T C
NHLH1 PKNOX1 PKNOX2 TGIF2 USF2
7273293
chr3 187948972 rs1871518 G A
H4TF2
7273294
chr3 187949022 rs192853386 T A
CTCF
7273295
chr3 187949042 rs73057669 C T
YY1
7273296
Genes possibly regulated by vista43541[chr3:187948643-187949049]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187871072 188608460 + LPP ENSG00000145012.8 187871072 0.96 0.99 4370 22429
chr3 187896331 187898598 + AC022498.1 ENSG00000213132.2 187896331 0.88 0.99 4371 47688
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43541[chr3:187948643-187949049]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results