EnhancerDB
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  3. vista43542[chr3:187980692-187981197]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43542[chr3:187980692-187981197]
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Tissue distribution of vista43542
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Transcription factor that possibly regulate vista43542[chr3:187980692-187981197]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 187980736 187981103 NR3C1 UCSC Txn Factor no Conserved 108531359
chr3 187980812 187981230 EP300 UCSC Txn Factor no Conserved 108531360
chr3 187980826 187981178 TCF12 UCSC Txn Factor no Conserved 108531361
chr3 187980880 187981179 FOSL2 UCSC Txn Factor no Conserved 108531362
chr3 187980934 187981199 FOS UCSC Txn Factor no Conserved 108531363
chr3 187980684 187980700 SOX8 JASPAR yes 8463712
chr3 187980684 187980700 SOX8 JASPAR yes 71103250
chr3 187980701 187980719 SRF JASPAR yes 8463713
chr3 187980701 187980719 SRF JASPAR yes 71103251
chr3 187980707 187980717 RORA JASPAR yes 8463714
chr3 187980707 187980717 RORA JASPAR yes 71103252
chr3 187980712 187980716 ESR1 TRANSFAC yes 8463715
chr3 187980712 187980716 ESR1 TRANSFAC yes 71103253
chr3 187980724 187980745 ZNF263 JASPAR yes 8463716
chr3 187980724 187980745 ZNF263 JASPAR yes 71103254
chr3 187980740 187980745 ETS2 TRANSFAC yes 8463717
chr3 187980740 187980745 ETS2 TRANSFAC yes 71103255
chr3 187980743 187980757 RORA JASPAR yes 8463718
chr3 187980743 187980757 RORA JASPAR yes 71103256
chr3 187980744 187980758 XBP1 JASPAR yes 8463719
chr3 187980744 187980758 XBP1 JASPAR yes 71103257
chr3 187980750 187980755 ATF1 TRANSFAC yes 8463720
chr3 187980750 187980755 ATF1 TRANSFAC yes 71103258
chr3 187980753 187980772 REST JASPAR yes 8463721
chr3 187980753 187980772 REST JASPAR yes 71103259
chr3 187980766 187980787 IRF1 JASPAR yes 8463722
chr3 187980766 187980787 IRF1 JASPAR yes 71103260
chr3 187980768 187980783 STAT2 JASPAR yes 8463723
chr3 187980768 187980783 STAT2 JASPAR yes 71103261
chr3 187980769 187980783 STAT1 JASPAR yes 8463724
chr3 187980769 187980783 STAT1 JASPAR yes 71103262
chr3 187980772 187980787 FOXP1 JASPAR yes 8463725
chr3 187980772 187980787 FOXP1 JASPAR yes 71103263
chr3 187980773 187980788 FOXP1 JASPAR yes 8463726
chr3 187980773 187980788 FOXP1 JASPAR yes 71103264
chr3 187980774 187980789 FOXP1 JASPAR yes 8463727
chr3 187980774 187980789 FOXP1 JASPAR yes 71103265
chr3 187980786 187980803 RARA JASPAR yes 8463728
chr3 187980786 187980803 RARA JASPAR yes 71103266
chr3 187980796 187980810 RORA JASPAR yes 8463729
chr3 187980796 187980810 RORA JASPAR yes 71103267
chr3 187980798 187980813 MEF2A JASPAR yes 8463730
chr3 187980798 187980813 MEF2A JASPAR yes 71103268
chr3 187980799 187980814 MEF2C JASPAR yes 8463731
chr3 187980799 187980814 MEF2C JASPAR yes 71103269
chr3 187980802 187980806 YY1 TRANSFAC yes 8463732
chr3 187980802 187980806 YY1 TRANSFAC yes 71103270
chr3 187980852 187980862 SMAD3 JASPAR yes 8463733
chr3 187980852 187980862 SMAD3 JASPAR yes 71103271
chr3 187980872 187980883 NRL JASPAR yes 8463734
chr3 187980872 187980883 NRL JASPAR yes 71103272
chr3 187980892 187980898 YY1 JASPAR yes 8463735
chr3 187980892 187980898 YY1 JASPAR yes 71103273
chr3 187980914 187980924 ELK1 JASPAR yes 8463736
chr3 187980914 187980924 ELK1 JASPAR yes 71103274
chr3 187980914 187980926 ELF1 JASPAR yes 8463737
chr3 187980914 187980926 ELF1 JASPAR yes 71103275
chr3 187980916 187980925 ELK4 JASPAR yes 8463738
chr3 187980916 187980925 ELK4 JASPAR yes 71103276
chr3 187980916 187980927 ELK4 JASPAR yes 8463739
chr3 187980916 187980927 ELK4 JASPAR yes 71103277
chr3 187980917 187980925 FEV JASPAR yes 8463740
chr3 187980917 187980925 FEV JASPAR yes 71103278
chr3 187980918 187980924 ETS1 JASPAR yes 8463741
chr3 187980918 187980924 ETS1 JASPAR yes 71103279
chr3 187980944 187980948 H1TF2 TRANSFAC yes 8463742
chr3 187980944 187980948 NFE TRANSFAC yes 8463743
chr3 187980944 187980948 SRF TRANSFAC yes 8463744
chr3 187980944 187980948 H1TF2 TRANSFAC yes 71103280
chr3 187980944 187980948 NFE TRANSFAC yes 71103281
chr3 187980944 187980948 SRF TRANSFAC yes 71103282
chr3 187980946 187980958 POU2F1 JASPAR yes 8463745
chr3 187980946 187980958 POU2F1 JASPAR yes 71103283
chr3 187980946 187980959 POU3F3 JASPAR yes 8463746
chr3 187980946 187980959 POU3F3 JASPAR yes 71103284
chr3 187980946 187980960 POU1F1 JASPAR yes 8463747
chr3 187980946 187980960 POU1F1 JASPAR yes 71103285
chr3 187980947 187980959 POU3F2 JASPAR yes 8463748
chr3 187980947 187980959 POU3F2 JASPAR yes 71103286
chr3 187980947 187980960 POU2F2 JASPAR yes 8463749
chr3 187980947 187980960 POU2F2 JASPAR yes 71103287
chr3 187980953 187980964 PROP1 JASPAR yes 8463750
chr3 187980953 187980964 PROP1 JASPAR yes 71103288
chr3 187980972 187980987 FOXA1 JASPAR yes 8463751
chr3 187980972 187980987 FOXA1 JASPAR yes 71103289
chr3 187980987 187980995 HOXA5 JASPAR yes 8463752
chr3 187980987 187980995 HOXA5 JASPAR yes 71103290
chr3 187980994 187980999 GATA2 JASPAR yes 8463753
chr3 187980994 187980999 GATA2 JASPAR yes 71103291
chr3 187980995 187981006 ETV2 JASPAR yes 8463754
chr3 187980995 187981006 SPDEF JASPAR yes 8463755
chr3 187980995 187981006 ETV2 JASPAR yes 71103292
chr3 187980995 187981006 SPDEF JASPAR yes 71103293
chr3 187980997 187981002 GATA2 JASPAR yes 8463756
chr3 187980997 187981002 GATA2 JASPAR yes 71103294
chr3 187981009 187981024 FOXA1 JASPAR yes 8463757
chr3 187981009 187981024 FOXA1 JASPAR yes 71103295
chr3 187981010 187981021 FOXB1 JASPAR yes 8463758
chr3 187981010 187981021 FOXB1 JASPAR yes 71103296
chr3 187981016 187981025 SRY JASPAR yes 8463759
chr3 187981016 187981025 SRY JASPAR yes 71103297
chr3 187981018 187981021 MYB TRANSFAC yes 8463760
chr3 187981018 187981021 MYB TRANSFAC yes 71103298
chr3 187981019 187981034 SOX21 JASPAR yes 8463761
chr3 187981019 187981034 SOX21 JASPAR yes 71103299
chr3 187981033 187981044 HOXC13 JASPAR yes 8463762
chr3 187981033 187981044 HOXC13 JASPAR yes 71103300
chr3 187981037 187981047 GCM2 JASPAR yes 8463763
chr3 187981037 187981047 GCM2 JASPAR yes 71103301
chr3 187981037 187981048 GCM1 JASPAR yes 8463764
chr3 187981037 187981048 GCM1 JASPAR yes 71103302
chr3 187981042 187981059 ZNF410 JASPAR yes 8463765
chr3 187981042 187981059 ZNF410 JASPAR yes 71103303
chr3 187981049 187981064 NR2C2 JASPAR yes 8463766
chr3 187981049 187981064 NR2C2 JASPAR yes 71103304
chr3 187981051 187981072 ZNF263 JASPAR yes 8463767
chr3 187981051 187981072 ZNF263 JASPAR yes 71103305
chr3 187981052 187981056 LFA1 TRANSFAC yes 8463768
chr3 187981052 187981056 LFA1 TRANSFAC yes 71103306
chr3 187981079 187981097 MAFF JASPAR yes 8463769
chr3 187981079 187981097 MAFF JASPAR yes 71103307
chr3 187981081 187981092 BATF JASPAR yes 8463770
chr3 187981081 187981092 BATF JASPAR yes 71103308
chr3 187981084 187981104 TBX19 JASPAR yes 8463771
chr3 187981084 187981104 TBX19 JASPAR yes 71103309
chr3 187981098 187981107 PITX3 JASPAR yes 8463772
chr3 187981098 187981107 PITX3 JASPAR yes 71103310
chr3 187981098 187981108 GSC JASPAR yes 8463773
chr3 187981098 187981108 GSC JASPAR yes 71103311
chr3 187981136 187981146 NFIA JASPAR yes 8463774
chr3 187981136 187981146 NFIA JASPAR yes 71103312
chr3 187981138 187981144 NFIC JASPAR yes 8463775
chr3 187981138 187981144 NFIC JASPAR yes 71103313
chr3 187981173 187981188 PRDM1 JASPAR yes 8463776
chr3 187981173 187981188 PRDM1 JASPAR yes 71103314
chr3 187981174 187981178 YY1 TRANSFAC yes 8463777
chr3 187981174 187981178 YY1 TRANSFAC yes 71103315
chr3 187981195 187981200 MYC TRANSFAC yes 8463778
chr3 187981195 187981200 MYC TRANSFAC yes 71103316
SNP sites on vista43542[chr3:187980692-187981197]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 187980772 rs76196612 G A,T
FOXP1 IRF1 NR3C1 REST STAT1 STAT2
7273692
chr3 187980825 rs544206846 A G
EP300 NR3C1
7273693
chr3 187980887 rs372261431 A G
EP300 FOSL2 NR3C1 TCF12
7273694
chr3 187980914 rs73059678 C T
ELF1 ELK1 EP300 FOSL2 NR3C1 TCF12
7273695
chr3 187980915 rs529515119 G A
ELF1 ELK1 EP300 FOSL2 NR3C1 TCF12
7273696
chr3 187981045 rs531865065 G A,T
EP300 FOS FOSL2 GCM1 GCM2 NR3C1 TCF12 ZNF410
7273697
chr3 187981104 rs550644305 T A
EP300 FOS FOSL2 GSC PITX3 TBX19 TCF12
7273698
Genes possibly regulated by vista43542[chr3:187980692-187981197]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 187896331 187898598 + AC022498.1 ENSG00000213132.2 187896331 0.88 0.99 4371 15639
Expression level of Genes
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miRNAs possibly regulated by vista43542[chr3:187980692-187981197]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results