EnhancerDB
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  3. vista43620[chr3:189559377-189559697]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43620[chr3:189559377-189559697]
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Tissue distribution of vista43620
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Transcription factor that possibly regulate vista43620[chr3:189559377-189559697]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 189559152 189559584 STAT3 UCSC Txn Factor no Conserved 108531446
chr3 189559242 189559758 CEBPB UCSC Txn Factor no Conserved 108531447
chr3 189559260 189559626 NFIC UCSC Txn Factor no Conserved 108531448
chr3 189559265 189559600 RUNX3 UCSC Txn Factor no Conserved 108531449
chr3 189559338 189559603 FOS UCSC Txn Factor no Conserved 108531450
chr3 189559362 189559548 BATF UCSC Txn Factor no Conserved 108531451
chr3 189559389 189559393 H1TF2 TRANSFAC yes 8597880
chr3 189559389 189559393 NFE TRANSFAC yes 8597881
chr3 189559389 189559393 SRF TRANSFAC yes 8597882
chr3 189559389 189559393 H1TF2 TRANSFAC yes 71107172
chr3 189559389 189559393 NFE TRANSFAC yes 71107173
chr3 189559389 189559393 SRF TRANSFAC yes 71107174
chr3 189559407 189559423 RFX3 JASPAR yes 8597883
chr3 189559407 189559423 RFX4 JASPAR yes 8597884
chr3 189559407 189559423 RFX3 JASPAR yes 71107175
chr3 189559407 189559423 RFX4 JASPAR yes 71107176
chr3 189559416 189559421 GATA2 JASPAR yes 8597885
chr3 189559416 189559421 GATA2 JASPAR yes 71107177
chr3 189559417 189559431 JUN JASPAR yes 8597886
chr3 189559417 189559431 JUN JASPAR yes 71107178
chr3 189559421 189559432 FOS JASPAR yes 8597887
chr3 189559421 189559432 FOSL1 JASPAR yes 8597888
chr3 189559421 189559432 JUND JASPAR yes 8597889
chr3 189559421 189559432 NFE2 JASPAR yes 8597890
chr3 189559421 189559432 FOS JASPAR yes 71107179
chr3 189559421 189559432 FOSL1 JASPAR yes 71107180
chr3 189559421 189559432 JUND JASPAR yes 71107181
chr3 189559421 189559432 NFE2 JASPAR yes 71107182
chr3 189559422 189559431 JDP2 JASPAR yes 8597891
chr3 189559422 189559431 JDP2 JASPAR yes 71107183
chr3 189559422 189559433 FOSL2 JASPAR yes 8597892
chr3 189559422 189559433 JUNB JASPAR yes 8597893
chr3 189559422 189559433 FOSL2 JASPAR yes 71107184
chr3 189559422 189559433 JUNB JASPAR yes 71107185
chr3 189559422 189559436 JUN JASPAR yes 8597894
chr3 189559422 189559436 JUN JASPAR yes 71107186
chr3 189559423 189559434 BATF JASPAR yes 8597895
chr3 189559423 189559434 BATF JASPAR yes 71107187
chr3 189559428 189559432 YY1 TRANSFAC yes 8597896
chr3 189559428 189559432 YY1 TRANSFAC yes 71107188
chr3 189559428 189559443 STAT1 JASPAR yes 8597897
chr3 189559428 189559443 STAT1 JASPAR yes 71107189
chr3 189559453 189559467 GLIS3 JASPAR yes 8597898
chr3 189559453 189559467 GLIS3 JASPAR yes 71107190
chr3 189559492 189559507 JUND JASPAR yes 8597899
chr3 189559492 189559507 JUND JASPAR yes 71107191
chr3 189559493 189559506 JUN JASPAR yes 8597900
chr3 189559493 189559506 JUN JASPAR yes 71107192
chr3 189559494 189559507 ATF4 JASPAR yes 8597901
chr3 189559494 189559507 ATF4 JASPAR yes 71107193
chr3 189559495 189559506 CEBPA JASPAR yes 8597902
chr3 189559495 189559506 CEBPA JASPAR yes 71107194
chr3 189559495 189559507 HLF JASPAR yes 8597903
chr3 189559495 189559507 HLF JASPAR yes 71107195
chr3 189559496 189559507 CEBPB JASPAR yes 8597904
chr3 189559496 189559507 CEBPB JASPAR yes 71107196
chr3 189559537 189559551 JUN JASPAR yes 8597905
chr3 189559537 189559551 JUN JASPAR yes 71107197
chr3 189559540 189559551 FOSL2 JASPAR yes 8597906
chr3 189559540 189559551 JUNB JASPAR yes 8597907
chr3 189559540 189559551 FOSL2 JASPAR yes 71107198
chr3 189559540 189559551 JUNB JASPAR yes 71107199
chr3 189559541 189559552 FOS JASPAR yes 8597908
chr3 189559541 189559552 FOSL1 JASPAR yes 8597909
chr3 189559541 189559552 JUND JASPAR yes 8597910
chr3 189559541 189559552 NFE2 JASPAR yes 8597911
chr3 189559541 189559552 FOS JASPAR yes 71107200
chr3 189559541 189559552 FOSL1 JASPAR yes 71107201
chr3 189559541 189559552 JUND JASPAR yes 71107202
chr3 189559541 189559552 NFE2 JASPAR yes 71107203
chr3 189559542 189559551 JDP2 JASPAR yes 8597912
chr3 189559542 189559551 JDP2 JASPAR yes 71107204
chr3 189559542 189559553 FOSL2 JASPAR yes 8597913
chr3 189559542 189559553 JUNB JASPAR yes 8597914
chr3 189559542 189559553 FOSL2 JASPAR yes 71107205
chr3 189559542 189559553 JUNB JASPAR yes 71107206
chr3 189559542 189559556 JUN JASPAR yes 8597915
chr3 189559542 189559556 JUN JASPAR yes 71107207
chr3 189559543 189559554 BATF JASPAR yes 8597916
chr3 189559543 189559554 BATF JASPAR yes 71107208
chr3 189559548 189559552 YY1 TRANSFAC yes 8597917
chr3 189559548 189559552 YY1 TRANSFAC yes 71107209
chr3 189559592 189559595 MYB TRANSFAC yes 8597918
chr3 189559592 189559595 MYB TRANSFAC yes 71107210
chr3 189559592 189559607 PRDM1 JASPAR yes 8597919
chr3 189559592 189559607 PRDM1 JASPAR yes 71107211
chr3 189559603 189559623 TBX19 JASPAR yes 8597920
chr3 189559603 189559623 TBX19 JASPAR yes 71107212
chr3 189559608 189559621 ZBTB18 JASPAR yes 8597921
chr3 189559608 189559621 ZBTB18 JASPAR yes 71107213
chr3 189559610 189559620 FIGLA JASPAR yes 8597922
chr3 189559610 189559620 ID4 JASPAR yes 8597923
chr3 189559610 189559620 TCF3 JASPAR yes 8597924
chr3 189559610 189559620 TCF4 JASPAR yes 8597925
chr3 189559610 189559620 FIGLA JASPAR yes 71107214
chr3 189559610 189559620 ID4 JASPAR yes 71107215
chr3 189559610 189559620 TCF3 JASPAR yes 71107216
chr3 189559610 189559620 TCF4 JASPAR yes 71107217
chr3 189559618 189559632 RORA JASPAR yes 8597926
chr3 189559618 189559632 RORA JASPAR yes 71107218
chr3 189559621 189559631 RORA JASPAR yes 8597927
chr3 189559621 189559631 RORA JASPAR yes 71107219
chr3 189559626 189559630 ESR1 TRANSFAC yes 8597928
chr3 189559626 189559630 ESR1 TRANSFAC yes 71107220
chr3 189559638 189559643 ETS2 TRANSFAC yes 8597929
chr3 189559638 189559643 ETS2 TRANSFAC yes 71107221
chr3 189559668 189559679 TFAP2A JASPAR yes 8597930
chr3 189559668 189559679 TFAP2A JASPAR yes 71107222
chr3 189559677 189559683 SOX10 JASPAR yes 8597931
chr3 189559677 189559683 SOX10 JASPAR yes 71107223
SNP sites on vista43620[chr3:189559377-189559697]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 189559393 rs533880390 A G
BATF CEBPB FOS H1TF2 NFE NFIC RUNX3 SRF STAT3
7285475
chr3 189559436 rs73057261 T C
BATF CEBPB FOS JUN NFIC RUNX3 STAT1 STAT3
7285476
chr3 189559513 rs145806288 T C
BATF CEBPB FOS NFIC RUNX3 STAT3
7285477
chr3 189559682 rs138921085 G A
CEBPB SOX10
7285478
Genes possibly regulated by vista43620[chr3:189559377-189559697]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista43620[chr3:189559377-189559697]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results