EnhancerDB
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  3. vista43633[chr3:190041292-190041577]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43633[chr3:190041292-190041577]
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Tissue distribution of vista43633
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Transcription factor that possibly regulate vista43633[chr3:190041292-190041577]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 190041292 190041303 RUNX1 JASPAR yes 71107719
chr3 190041293 190041303 RUNX3 JASPAR yes 71107720
chr3 190041294 190041303 RUNX2 JASPAR yes 71107721
chr3 190041309 190041314 MYB TRANSFAC yes 71107722
chr3 190041318 190041328 NFATC3 JASPAR yes 71107723
chr3 190041319 190041326 NFATC2 JASPAR yes 71107724
chr3 190041327 190041347 RREB1 JASPAR yes 71107725
chr3 190041353 190041358 SP1 TRANSFAC yes 71107726
chr3 190041354 190041364 SP1 JASPAR yes 71107727
chr3 190041354 190041364 ZNF740 JASPAR yes 71107728
chr3 190041356 190041362 MAZ TRANSFAC yes 71107729
chr3 190041357 190041367 MZF1 JASPAR yes 71107730
chr3 190041361 190041366 ETS2 TRANSFAC yes 71107731
chr3 190041376 190041391 FOXP1 JASPAR yes 71107732
chr3 190041378 190041393 FOXP1 JASPAR yes 71107733
chr3 190041382 190041396 SPI1 JASPAR yes 71107734
chr3 190041394 190041405 STAT3 JASPAR yes 71107735
chr3 190041405 190041419 FOXF2 JASPAR yes 71107736
chr3 190041407 190041421 POU1F1 JASPAR yes 71107737
chr3 190041408 190041419 FOXP2 JASPAR yes 71107738
chr3 190041408 190041420 FOXI1 JASPAR yes 71107739
chr3 190041408 190041420 POU3F1 JASPAR yes 71107740
chr3 190041408 190041420 POU3F2 JASPAR yes 71107741
chr3 190041408 190041421 POU3F3 JASPAR yes 71107742
chr3 190041409 190041421 POU2F1 JASPAR yes 71107743
chr3 190041410 190041418 FOXG1 JASPAR yes 71107744
chr3 190041411 190041419 FOXL1 JASPAR yes 71107745
chr3 190041411 190041422 PROP1 JASPAR yes 71107746
chr3 190041423 190041428 GATA2 JASPAR yes 71107747
chr3 190041445 190041461 RFX5 JASPAR yes 71107748
chr3 190041446 190041465 RFX2 JASPAR yes 71107749
chr3 190041448 190041463 RFX5 JASPAR yes 71107750
chr3 190041474 190041489 PRDM1 JASPAR yes 71107751
chr3 190041478 190041483 ETS2 TRANSFAC yes 71107752
chr3 190041498 190041508 TBX21 JASPAR yes 71107753
chr3 190041498 190041509 TBX20 JASPAR yes 71107754
chr3 190041499 190041507 TBX15 JASPAR yes 71107755
chr3 190041500 190041505 SP1 TRANSFAC yes 71107756
chr3 190041508 190041523 HNF4G JASPAR yes 71107757
chr3 190041509 190041514 ETS2 TRANSFAC yes 71107758
chr3 190041537 190041541 YY1 TRANSFAC yes 71107759
chr3 190041541 190041551 FIGLA JASPAR yes 71107760
chr3 190041543 190041548 USF2 TRANSFAC yes 71107761
chr3 190041552 190041568 ZNF143 JASPAR yes 71107762
chr3 190041560 190041575 LEF1 JASPAR yes 71107763
chr3 190041561 190041575 TCF7L2 JASPAR yes 71107764
SNP sites on vista43633[chr3:190041292-190041577]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 190041352 rs56192155 G C no 7290106
chr3 190041397 rs16865347 T C
STAT3
7290107
chr3 190041453 rs77239424 A G
RFX2 RFX5
7290108
Genes possibly regulated by vista43633[chr3:190041292-190041577]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 190023490 190040264 - CLDN1 ENSG00000163347.5 190040264 0.86 0.86 4375 98972
chr3 190040330 190129932 + CLDN16 ENSG00000113946.3 190040330 0.99 1.0 4376 99038
Expression level of Genes
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miRNAs possibly regulated by vista43633[chr3:190041292-190041577]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results