EnhancerDB
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  3. vista43635[chr3:190104242-190104447]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43635[chr3:190104242-190104447]
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Tissue distribution of vista43635
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Transcription factor that possibly regulate vista43635[chr3:190104242-190104447]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 190103971 190104561 POLR2A UCSC Txn Factor no Conserved 108531473
chr3 190104127 190104527 FOS UCSC Txn Factor no Conserved 108531474
chr3 190104162 190104484 CEBPB UCSC Txn Factor no Conserved 108531475
chr3 190104169 190104471 EP300 UCSC Txn Factor no Conserved 108531476
chr3 190104196 190104473 FOSL2 UCSC Txn Factor no Conserved 108531477
chr3 190104263 190104452 JUND UCSC Txn Factor no Conserved 108531478
chr3 190104246 190104260 RORA JASPAR yes 8651043
chr3 190104246 190104260 RORA JASPAR yes 71107846
chr3 190104254 190104258 ESR1 TRANSFAC yes 8651044
chr3 190104254 190104258 ESR1 TRANSFAC yes 71107847
chr3 190104275 190104289 JUN JASPAR yes 8651045
chr3 190104275 190104289 JUN JASPAR yes 71107848
chr3 190104278 190104289 JUNB JASPAR yes 8651046
chr3 190104278 190104289 JUNB JASPAR yes 71107849
chr3 190104279 190104290 FOSL1 JASPAR yes 8651047
chr3 190104279 190104290 FOSL1 JASPAR yes 71107850
chr3 190104280 190104287 JUN TRANSFAC yes 8651048
chr3 190104280 190104287 JUN TRANSFAC yes 71107851
chr3 190104283 190104299 GLIS1 JASPAR yes 8651049
chr3 190104283 190104299 GLIS1 JASPAR yes 71107852
chr3 190104290 190104295 SP1 TRANSFAC yes 8651050
chr3 190104290 190104295 SP1 TRANSFAC yes 71107853
chr3 190104325 190104339 JUN JASPAR yes 8651051
chr3 190104325 190104339 JUN JASPAR yes 71107854
chr3 190104328 190104339 FOSL2 JASPAR yes 8651052
chr3 190104328 190104339 JUNB JASPAR yes 8651053
chr3 190104328 190104339 FOSL2 JASPAR yes 71107855
chr3 190104328 190104339 JUNB JASPAR yes 71107856
chr3 190104329 190104340 FOS JASPAR yes 8651054
chr3 190104329 190104340 FOSL1 JASPAR yes 8651055
chr3 190104329 190104340 JUND JASPAR yes 8651056
chr3 190104329 190104340 NFE2 JASPAR yes 8651057
chr3 190104329 190104340 FOS JASPAR yes 71107857
chr3 190104329 190104340 FOSL1 JASPAR yes 71107858
chr3 190104329 190104340 JUND JASPAR yes 71107859
chr3 190104329 190104340 NFE2 JASPAR yes 71107860
chr3 190104330 190104339 JDP2 JASPAR yes 8651058
chr3 190104330 190104339 JDP2 JASPAR yes 71107861
chr3 190104330 190104344 JUN JASPAR yes 8651059
chr3 190104330 190104344 JUN JASPAR yes 71107862
chr3 190104331 190104342 BATF JASPAR yes 8651060
chr3 190104331 190104342 BATF JASPAR yes 71107863
chr3 190104338 190104343 GATA2 JASPAR yes 8651061
chr3 190104338 190104343 GATA2 JASPAR yes 71107864
chr3 190104346 190104355 NKX2-8 JASPAR yes 8651062
chr3 190104346 190104355 NKX2-8 JASPAR yes 71107865
chr3 190104346 190104356 NKX2-3 JASPAR yes 8651063
chr3 190104346 190104356 NKX2-3 JASPAR yes 71107866
chr3 190104355 190104361 YY1 JASPAR yes 8651064
chr3 190104355 190104361 YY1 JASPAR yes 71107867
chr3 190104365 190104370 H4TF1 TRANSFAC yes 8651065
chr3 190104365 190104370 H4TF1 TRANSFAC yes 71107868
chr3 190104365 190104376 CEBPB JASPAR yes 8651066
chr3 190104365 190104376 CEBPB JASPAR yes 71107869
chr3 190104365 190104378 ATF4 JASPAR yes 8651067
chr3 190104365 190104378 ATF4 JASPAR yes 71107870
chr3 190104366 190104379 JUN JASPAR yes 8651068
chr3 190104366 190104379 JUN JASPAR yes 71107871
chr3 190104407 190104421 POU4F1 JASPAR yes 8651069
chr3 190104407 190104421 POU4F1 JASPAR yes 71107872
chr3 190104407 190104423 POU4F3 JASPAR yes 8651070
chr3 190104407 190104423 POU4F3 JASPAR yes 71107873
chr3 190104410 190104425 FOXP1 JASPAR yes 8651071
chr3 190104410 190104425 FOXP1 JASPAR yes 71107874
chr3 190104411 190104420 SRY JASPAR yes 8651072
chr3 190104411 190104420 SRY JASPAR yes 71107875
chr3 190104411 190104422 FOXP2 JASPAR yes 8651073
chr3 190104411 190104422 FOXP2 JASPAR yes 71107876
chr3 190104411 190104423 FOXC2 JASPAR yes 8651074
chr3 190104411 190104423 FOXC2 JASPAR yes 71107877
chr3 190104411 190104425 FOXF2 JASPAR yes 8651075
chr3 190104411 190104425 FOXF2 JASPAR yes 71107878
chr3 190104412 190104420 FOXG1 JASPAR yes 8651076
chr3 190104412 190104420 FOXO3 JASPAR yes 8651077
chr3 190104412 190104420 FOXG1 JASPAR yes 71107879
chr3 190104412 190104420 FOXO3 JASPAR yes 71107880
chr3 190104412 190104423 FOXC1 JASPAR yes 8651078
chr3 190104412 190104423 FOXC1 JASPAR yes 71107881
chr3 190104414 190104422 GATA3 JASPAR yes 8651079
chr3 190104414 190104422 GATA3 JASPAR yes 71107882
chr3 190104423 190104434 NFKB1 JASPAR yes 8651080
chr3 190104423 190104434 NFKB1 JASPAR yes 71107883
SNP sites on vista43635[chr3:190104242-190104447]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 190104300 rs78055904 T C
CEBPB EP300 FOS FOSL2 JUND POLR2A
7291012
chr3 190104303 rs6764454 A G
CEBPB EP300 FOS FOSL2 JUND POLR2A
7291013
chr3 190104345 rs74653485 A C
CEBPB EP300 FOS FOSL2 JUND POLR2A
7291014
chr3 190104376 rs62278697 C T
ATF4 CEBPB EP300 FOS FOSL2 JUN JUND POLR2A
7291015
chr3 190104411 rs116780103 A G
CEBPB EP300 FOS FOSL2 FOXC2 FOXF2 FOXP1 FOXP2 JUND POLR2A POU4F1 POU4F3 SRY
7291016
Genes possibly regulated by vista43635[chr3:190104242-190104447]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 190023490 190040264 - CLDN1 ENSG00000163347.5 190040264 0.86 0.86 4375 36022
chr3 190040330 190129932 + CLDN16 ENSG00000113946.3 190040330 0.99 1.0 4376 36088
chr3 190146444 190167665 - TMEM207 ENSG00000198398.2 190167665 1.0 0.94 4377 36782
Expression level of Genes
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miRNAs possibly regulated by vista43635[chr3:190104242-190104447]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results