EnhancerDB
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  3. vista43636[chr3:190251387-190251779]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43636[chr3:190251387-190251779]
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Tissue distribution of vista43636
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Transcription factor that possibly regulate vista43636[chr3:190251387-190251779]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 190251407 190251977 STAT3 UCSC Txn Factor no Conserved 108531479
chr3 190251426 190251706 CEBPB UCSC Txn Factor no Conserved 108531480
chr3 190251414 190251427 ATF4 JASPAR yes 8658679
chr3 190251414 190251427 ATF4 JASPAR yes 71107884
chr3 190251458 190251468 MAX JASPAR yes 8658680
chr3 190251458 190251468 MAX JASPAR yes 71107885
chr3 190251459 190251469 MAX JASPAR yes 8658681
chr3 190251459 190251469 MNT JASPAR yes 8658682
chr3 190251459 190251469 TFE3 JASPAR yes 8658683
chr3 190251459 190251469 MAX JASPAR yes 71107886
chr3 190251459 190251469 MNT JASPAR yes 71107887
chr3 190251459 190251469 TFE3 JASPAR yes 71107888
chr3 190251461 190251466 MYC TRANSFAC yes 8658684
chr3 190251461 190251466 USF1 TRANSFAC yes 8658685
chr3 190251461 190251466 USF2 TRANSFAC yes 8658686
chr3 190251461 190251466 MYC TRANSFAC yes 71107889
chr3 190251461 190251466 USF1 TRANSFAC yes 71107890
chr3 190251461 190251466 USF2 TRANSFAC yes 71107891
chr3 190251461 190251468 USF1 JASPAR yes 8658687
chr3 190251461 190251468 USF1 JASPAR yes 71107892
chr3 190251473 190251486 ELF3 JASPAR yes 8658688
chr3 190251473 190251486 ELF3 JASPAR yes 71107893
chr3 190251474 190251485 SPDEF JASPAR yes 8658689
chr3 190251474 190251485 SPDEF JASPAR yes 71107894
chr3 190251499 190251512 SMAD2 JASPAR yes 8658690
chr3 190251499 190251512 SMAD2 JASPAR yes 71107895
chr3 190251564 190251575 STAT1 JASPAR yes 8658691
chr3 190251564 190251575 STAT1 JASPAR yes 71107896
chr3 190251570 190251583 JUN JASPAR yes 8658692
chr3 190251570 190251583 JUN JASPAR yes 71107897
chr3 190251601 190251611 SREBF2 JASPAR yes 8658693
chr3 190251601 190251611 SREBF2 JASPAR yes 71107898
chr3 190251611 190251631 TP53 JASPAR yes 8658694
chr3 190251611 190251631 TP53 JASPAR yes 71107899
chr3 190251637 190251647 RUNX3 JASPAR yes 8658695
chr3 190251637 190251647 RUNX3 JASPAR yes 71107900
chr3 190251638 190251647 RUNX2 JASPAR yes 8658696
chr3 190251638 190251647 RUNX2 JASPAR yes 71107901
chr3 190251644 190251650 NFIC JASPAR yes 8658697
chr3 190251644 190251650 NFIC JASPAR yes 71107902
chr3 190251651 190251665 SPIC JASPAR yes 8658698
chr3 190251651 190251665 SPIC JASPAR yes 71107903
chr3 190251662 190251667 GATA1 TRANSFAC yes 8658699
chr3 190251662 190251667 GATA1 TRANSFAC yes 71107904
chr3 190251692 190251698 TCF1 TRANSFAC yes 8658700
chr3 190251692 190251698 TCF1 TRANSFAC yes 71107905
chr3 190251696 190251701 ETS2 TRANSFAC yes 8658701
chr3 190251696 190251701 ETS2 TRANSFAC yes 71107906
chr3 190251717 190251730 NR2F1 JASPAR yes 8658702
chr3 190251717 190251730 NR2F1 JASPAR yes 71107907
chr3 190251718 190251733 NR2C2 JASPAR yes 8658703
chr3 190251718 190251733 NR2C2 JASPAR yes 71107908
chr3 190251721 190251725 ESR1 TRANSFAC yes 8658704
chr3 190251721 190251725 ESR1 TRANSFAC yes 71107909
chr3 190251735 190251756 IRF1 JASPAR yes 8658705
chr3 190251735 190251756 IRF1 JASPAR yes 71107910
chr3 190251740 190251755 FOXP1 JASPAR yes 8658706
chr3 190251740 190251755 FOXP1 JASPAR yes 71107911
chr3 190251741 190251756 FOXP1 JASPAR yes 8658707
chr3 190251741 190251756 FOXP1 JASPAR yes 71107912
chr3 190251741 190251762 IRF1 JASPAR yes 8658708
chr3 190251741 190251762 IRF1 JASPAR yes 71107913
chr3 190251742 190251757 FOXP1 JASPAR yes 8658709
chr3 190251742 190251757 FOXP1 JASPAR yes 71107914
chr3 190251743 190251758 FOXP1 JASPAR yes 8658710
chr3 190251743 190251758 FOXP1 JASPAR yes 71107915
chr3 190251747 190251768 IRF1 JASPAR yes 8658711
chr3 190251747 190251768 IRF1 JASPAR yes 71107916
chr3 190251753 190251774 IRF1 JASPAR yes 8658712
chr3 190251753 190251774 IRF1 JASPAR yes 71107917
chr3 190251756 190251760 YY1 TRANSFAC yes 8658713
chr3 190251756 190251760 YY1 TRANSFAC yes 71107918
chr3 190251760 190251775 FOXP1 JASPAR yes 8658714
chr3 190251760 190251775 FOXP1 JASPAR yes 71107919
chr3 190251770 190251780 HOXA13 JASPAR yes 8658715
chr3 190251770 190251780 HOXB13 JASPAR yes 8658716
chr3 190251770 190251780 HOXD13 JASPAR yes 8658717
chr3 190251770 190251780 HOXA13 JASPAR yes 71107920
chr3 190251770 190251780 HOXB13 JASPAR yes 71107921
chr3 190251770 190251780 HOXD13 JASPAR yes 71107922
chr3 190251770 190251781 HOXA10 JASPAR yes 8658718
chr3 190251770 190251781 HOXA10 JASPAR yes 71107923
chr3 190251771 190251781 ALX3 JASPAR yes 8658719
chr3 190251771 190251781 ESX1 JASPAR yes 8658720
chr3 190251771 190251781 GBX2 JASPAR yes 8658721
chr3 190251771 190251781 GSX1 JASPAR yes 8658722
chr3 190251771 190251781 GSX2 JASPAR yes 8658723
chr3 190251771 190251781 HESX1 JASPAR yes 8658724
chr3 190251771 190251781 LBX2 JASPAR yes 8658725
chr3 190251771 190251781 LHX2 JASPAR yes 8658726
chr3 190251771 190251781 MIXL1 JASPAR yes 8658727
chr3 190251771 190251781 MNX1 JASPAR yes 8658728
chr3 190251771 190251781 RAX JASPAR yes 8658729
chr3 190251771 190251781 ALX3 JASPAR yes 71107924
chr3 190251771 190251781 ESX1 JASPAR yes 71107925
chr3 190251771 190251781 GBX2 JASPAR yes 71107926
chr3 190251771 190251781 GSX1 JASPAR yes 71107927
chr3 190251771 190251781 GSX2 JASPAR yes 71107928
chr3 190251771 190251781 HESX1 JASPAR yes 71107929
chr3 190251771 190251781 LBX2 JASPAR yes 71107930
chr3 190251771 190251781 LHX2 JASPAR yes 71107931
chr3 190251771 190251781 MIXL1 JASPAR yes 71107932
chr3 190251771 190251781 MNX1 JASPAR yes 71107933
chr3 190251771 190251781 RAX JASPAR yes 71107934
chr3 190251772 190251780 BARX1 JASPAR yes 8658730
chr3 190251772 190251780 BSX JASPAR yes 8658731
chr3 190251772 190251780 DLX6 JASPAR yes 8658732
chr3 190251772 190251780 ISX JASPAR yes 8658733
chr3 190251772 190251780 LBX1 JASPAR yes 8658734
chr3 190251772 190251780 LHX9 JASPAR yes 8658735
chr3 190251772 190251780 MSX1 JASPAR yes 8658736
chr3 190251772 190251780 MSX2 JASPAR yes 8658737
chr3 190251772 190251780 NKX6-2 JASPAR yes 8658738
chr3 190251772 190251780 PRRX1 JASPAR yes 8658739
chr3 190251772 190251780 RAX2 JASPAR yes 8658740
chr3 190251772 190251780 SHOX JASPAR yes 8658741
chr3 190251772 190251780 UNCX JASPAR yes 8658742
chr3 190251772 190251780 BARX1 JASPAR yes 71107935
chr3 190251772 190251780 BSX JASPAR yes 71107936
chr3 190251772 190251780 DLX6 JASPAR yes 71107937
chr3 190251772 190251780 ISX JASPAR yes 71107938
chr3 190251772 190251780 LBX1 JASPAR yes 71107939
chr3 190251772 190251780 LHX9 JASPAR yes 71107940
chr3 190251772 190251780 MSX1 JASPAR yes 71107941
chr3 190251772 190251780 MSX2 JASPAR yes 71107942
chr3 190251772 190251780 NKX6-2 JASPAR yes 71107943
chr3 190251772 190251780 PRRX1 JASPAR yes 71107944
chr3 190251772 190251780 RAX2 JASPAR yes 71107945
chr3 190251772 190251780 SHOX JASPAR yes 71107946
chr3 190251772 190251780 UNCX JASPAR yes 71107947
chr3 190251773 190251784 PHOX2A JASPAR yes 8658743
chr3 190251773 190251784 PROP1 JASPAR yes 8658744
chr3 190251773 190251784 PHOX2A JASPAR yes 71107948
chr3 190251773 190251784 PROP1 JASPAR yes 71107949
SNP sites on vista43636[chr3:190251387-190251779]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 190251511 rs570027804 C T
CEBPB SMAD2 STAT3
7291821
chr3 190251546 rs115019260 T C
CEBPB STAT3
7291822
chr3 190251678 rs577789355 G A
CEBPB STAT3
7291823
chr3 190251691 rs112903217 G A
CEBPB STAT3
7291824
Genes possibly regulated by vista43636[chr3:190251387-190251779]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 190146444 190167665 - TMEM207 ENSG00000198398.2 190167665 1.0 0.94 4377 16278
chr3 190231840 190375843 + IL1RAP ENSG00000196083.5 190231840 0.91 0.99 4378 80453
Expression level of Genes
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miRNAs possibly regulated by vista43636[chr3:190251387-190251779]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results