EnhancerDB
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  3. vista43850[chr4:50610-50903]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43850[chr4:50610-50903]
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Tissue distribution of vista43850
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Transcription factor that possibly regulate vista43850[chr4:50610-50903]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 50604 50617 SCRT2 JASPAR yes 49187119
chr4 50604 50617 SCRT2 JASPAR yes 87763795
chr4 50604 50619 SCRT1 JASPAR yes 49187120
chr4 50604 50619 SCRT1 JASPAR yes 87763796
chr4 50612 50622 ID4 JASPAR yes 49187121
chr4 50612 50622 TCF4 JASPAR yes 49187122
chr4 50612 50622 ID4 JASPAR yes 87763797
chr4 50612 50622 TCF4 JASPAR yes 87763798
chr4 50614 50619 USF2 TRANSFAC yes 49187123
chr4 50614 50619 USF2 TRANSFAC yes 87763799
chr4 50627 50638 CEBPA JASPAR yes 49187124
chr4 50627 50638 CEBPA JASPAR yes 87763800
chr4 50643 50647 NFE TRANSFAC yes 49187125
chr4 50643 50647 NFE TRANSFAC yes 87763801
chr4 50660 50681 IRF1 JASPAR yes 49187126
chr4 50660 50681 IRF1 JASPAR yes 87763802
chr4 50663 50667 YY1 TRANSFAC yes 49187127
chr4 50663 50667 YY1 TRANSFAC yes 87763803
chr4 50668 50681 POU2F2 JASPAR yes 49187128
chr4 50668 50681 POU2F2 JASPAR yes 87763804
chr4 50668 50682 POU1F1 JASPAR yes 49187129
chr4 50668 50682 POU1F1 JASPAR yes 87763805
chr4 50669 50681 POU3F1 JASPAR yes 49187130
chr4 50669 50681 POU3F2 JASPAR yes 49187131
chr4 50669 50681 POU3F1 JASPAR yes 87763806
chr4 50669 50681 POU3F2 JASPAR yes 87763807
chr4 50670 50682 POU2F1 JASPAR yes 49187132
chr4 50670 50682 POU2F1 JASPAR yes 87763808
chr4 50671 50680 POU3F4 JASPAR yes 49187133
chr4 50671 50680 POU5F1B JASPAR yes 49187134
chr4 50671 50680 POU3F4 JASPAR yes 87763809
chr4 50671 50680 POU5F1B JASPAR yes 87763810
chr4 50678 50682 TEAD2 TRANSFAC yes 49187135
chr4 50678 50682 TEAD2 TRANSFAC yes 87763811
chr4 50679 50697 NFYA JASPAR yes 49187136
chr4 50679 50697 NFYA JASPAR yes 87763812
chr4 50680 50683 MYB TRANSFAC yes 49187137
chr4 50680 50683 MYB TRANSFAC yes 87763813
chr4 50684 50700 ZNF143 JASPAR yes 49187138
chr4 50684 50700 ZNF143 JASPAR yes 87763814
chr4 50706 50712 MZF1 JASPAR yes 49187139
chr4 50706 50712 MZF1 JASPAR yes 87763815
chr4 50708 50718 ALX3 JASPAR yes 49187140
chr4 50708 50718 EN2 JASPAR yes 49187141
chr4 50708 50718 ESX1 JASPAR yes 49187142
chr4 50708 50718 GBX1 JASPAR yes 49187143
chr4 50708 50718 GSX1 JASPAR yes 49187144
chr4 50708 50718 HOXA2 JASPAR yes 49187145
chr4 50708 50718 LBX2 JASPAR yes 49187146
chr4 50708 50718 ALX3 JASPAR yes 87763816
chr4 50708 50718 EN2 JASPAR yes 87763817
chr4 50708 50718 ESX1 JASPAR yes 87763818
chr4 50708 50718 GBX1 JASPAR yes 87763819
chr4 50708 50718 GSX1 JASPAR yes 87763820
chr4 50708 50718 HOXA2 JASPAR yes 87763821
chr4 50708 50718 LBX2 JASPAR yes 87763822
chr4 50709 50713 H1TF2 TRANSFAC yes 49187147
chr4 50709 50713 NFE TRANSFAC yes 49187148
chr4 50709 50713 SRF TRANSFAC yes 49187149
chr4 50709 50713 H1TF2 TRANSFAC yes 87763823
chr4 50709 50713 NFE TRANSFAC yes 87763824
chr4 50709 50713 SRF TRANSFAC yes 87763825
chr4 50709 50717 BSX JASPAR yes 49187150
chr4 50709 50717 DLX6 JASPAR yes 49187151
chr4 50709 50717 MSX1 JASPAR yes 49187152
chr4 50709 50717 MSX2 JASPAR yes 49187153
chr4 50709 50717 BSX JASPAR yes 87763826
chr4 50709 50717 DLX6 JASPAR yes 87763827
chr4 50709 50717 MSX1 JASPAR yes 87763828
chr4 50709 50717 MSX2 JASPAR yes 87763829
chr4 50717 50726 ZEB1 JASPAR yes 49187154
chr4 50717 50726 ZEB1 JASPAR yes 87763830
chr4 50721 50738 RARA JASPAR yes 49187155
chr4 50721 50738 RARA JASPAR yes 87763831
chr4 50730 50744 POU4F1 JASPAR yes 49187156
chr4 50730 50744 POU4F1 JASPAR yes 87763832
chr4 50737 50745 FOXL1 JASPAR yes 49187157
chr4 50737 50745 FOXL1 JASPAR yes 87763833
chr4 50741 50745 TEAD2 TRANSFAC yes 49187158
chr4 50741 50745 TEAD2 TRANSFAC yes 87763834
chr4 50743 50746 MYB TRANSFAC yes 49187159
chr4 50743 50746 MYB TRANSFAC yes 87763835
chr4 50762 50783 ZNF263 JASPAR yes 49187160
chr4 50762 50783 ZNF263 JASPAR yes 87763836
chr4 50766 50787 ZNF263 JASPAR yes 49187161
chr4 50766 50787 ZNF263 JASPAR yes 87763837
chr4 50805 50809 H1TF2 TRANSFAC yes 49187162
chr4 50805 50809 NFE TRANSFAC yes 49187163
chr4 50805 50809 SRF TRANSFAC yes 49187164
chr4 50805 50809 H1TF2 TRANSFAC yes 87763838
chr4 50805 50809 NFE TRANSFAC yes 87763839
chr4 50805 50809 SRF TRANSFAC yes 87763840
chr4 50807 50815 HOXA5 JASPAR yes 49187165
chr4 50807 50815 HOXA5 JASPAR yes 87763841
chr4 50809 50820 NRL JASPAR yes 49187166
chr4 50809 50820 NRL JASPAR yes 87763842
chr4 50809 50824 MAFK JASPAR yes 49187167
chr4 50809 50824 MAFK JASPAR yes 87763843
chr4 50818 50825 SPI1 JASPAR yes 49187168
chr4 50818 50825 SPI1 JASPAR yes 87763844
chr4 50824 50839 FOXP1 JASPAR yes 49187169
chr4 50824 50839 FOXP1 JASPAR yes 87763845
chr4 50826 50841 FOXP1 JASPAR yes 49187170
chr4 50826 50841 FOXP1 JASPAR yes 87763846
chr4 50861 50879 SRF JASPAR yes 49187171
chr4 50861 50879 SRF JASPAR yes 87763847
chr4 50865 50875 EN2 JASPAR yes 49187172
chr4 50865 50875 ESX1 JASPAR yes 49187173
chr4 50865 50875 GBX1 JASPAR yes 49187174
chr4 50865 50875 GBX2 JASPAR yes 49187175
chr4 50865 50875 HESX1 JASPAR yes 49187176
chr4 50865 50875 LBX2 JASPAR yes 49187177
chr4 50865 50875 LHX2 JASPAR yes 49187178
chr4 50865 50875 MIXL1 JASPAR yes 49187179
chr4 50865 50875 MNX1 JASPAR yes 49187180
chr4 50865 50875 RAX JASPAR yes 49187181
chr4 50865 50875 EN2 JASPAR yes 87763848
chr4 50865 50875 ESX1 JASPAR yes 87763849
chr4 50865 50875 GBX1 JASPAR yes 87763850
chr4 50865 50875 GBX2 JASPAR yes 87763851
chr4 50865 50875 HESX1 JASPAR yes 87763852
chr4 50865 50875 LBX2 JASPAR yes 87763853
chr4 50865 50875 LHX2 JASPAR yes 87763854
chr4 50865 50875 MIXL1 JASPAR yes 87763855
chr4 50865 50875 MNX1 JASPAR yes 87763856
chr4 50865 50875 RAX JASPAR yes 87763857
chr4 50866 50870 H1TF2 TRANSFAC yes 49187182
chr4 50866 50870 NFE TRANSFAC yes 49187183
chr4 50866 50870 SRF TRANSFAC yes 49187184
chr4 50866 50870 H1TF2 TRANSFAC yes 87763858
chr4 50866 50870 NFE TRANSFAC yes 87763859
chr4 50866 50870 SRF TRANSFAC yes 87763860
chr4 50866 50874 BARX1 JASPAR yes 49187185
chr4 50866 50874 BSX JASPAR yes 49187186
chr4 50866 50874 DLX6 JASPAR yes 49187187
chr4 50866 50874 ISX JASPAR yes 49187188
chr4 50866 50874 LBX1 JASPAR yes 49187189
chr4 50866 50874 LHX9 JASPAR yes 49187190
chr4 50866 50874 MSX1 JASPAR yes 49187191
chr4 50866 50874 MSX2 JASPAR yes 49187192
chr4 50866 50874 NKX6-2 JASPAR yes 49187193
chr4 50866 50874 PRRX1 JASPAR yes 49187194
chr4 50866 50874 RAX2 JASPAR yes 49187195
chr4 50866 50874 SHOX JASPAR yes 49187196
chr4 50866 50874 UNCX JASPAR yes 49187197
chr4 50866 50874 BARX1 JASPAR yes 87763861
chr4 50866 50874 BSX JASPAR yes 87763862
chr4 50866 50874 DLX6 JASPAR yes 87763863
chr4 50866 50874 ISX JASPAR yes 87763864
chr4 50866 50874 LBX1 JASPAR yes 87763865
chr4 50866 50874 LHX9 JASPAR yes 87763866
chr4 50866 50874 MSX1 JASPAR yes 87763867
chr4 50866 50874 MSX2 JASPAR yes 87763868
chr4 50866 50874 NKX6-2 JASPAR yes 87763869
chr4 50866 50874 PRRX1 JASPAR yes 87763870
chr4 50866 50874 RAX2 JASPAR yes 87763871
chr4 50866 50874 SHOX JASPAR yes 87763872
chr4 50866 50874 UNCX JASPAR yes 87763873
chr4 50886 50907 IRF1 JASPAR yes 49187198
chr4 50886 50907 IRF1 JASPAR yes 87763874
chr4 50888 50903 IRF9 JASPAR yes 49187199
chr4 50888 50903 IRF9 JASPAR yes 87763875
chr4 50889 50903 IRF7 JASPAR yes 49187200
chr4 50889 50903 IRF7 JASPAR yes 87763876
chr4 50892 50913 IRF1 JASPAR yes 49187201
chr4 50892 50913 IRF1 JASPAR yes 87763877
chr4 50896 50911 PRDM1 JASPAR yes 49187202
chr4 50896 50911 PRDM1 JASPAR yes 87763878
chr4 50896 50914 NR3C1 JASPAR yes 49187203
chr4 50896 50914 NR3C1 JASPAR yes 87763879
SNP sites on vista43850[chr4:50610-50903]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 50705 rs10434451 C A no 7339904
chr4 50705 rs992268685 C A no 7339905
chr4 50706 rs1025444527 C G
MZF1
7339906
chr4 50706 rs10434452 C G
MZF1
7339907
chr4 50876 rs2780413 G A
SRF
7339908
chr4 50876 rs983009717 G A
SRF
7339909
Genes possibly regulated by vista43850[chr4:50610-50903]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 53179 88099 + ZNF595 ENSG00000197701.7 53179 0.76 0.96 4434 97724
Expression level of Genes
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miRNAs possibly regulated by vista43850[chr4:50610-50903]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results