EnhancerDB
  1. Home
  2. Enhancers
  3. vista43865[chr4:872986-873338]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43865[chr4:872986-873338]
Back to top
Tissue distribution of vista43865
Back to top
Transcription factor that possibly regulate vista43865[chr4:872986-873338]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 873034 873045 ELK4 JASPAR yes 49187817
chr4 873034 873045 FLI1 JASPAR yes 49187818
chr4 873035 873048 ELF1 JASPAR yes 49187819
chr4 873035 873049 ZIC1 JASPAR yes 49187820
chr4 873035 873050 ZIC3 JASPAR yes 49187821
chr4 873035 873050 ZIC4 JASPAR yes 49187822
chr4 873036 873043 SPI1 JASPAR yes 49187823
chr4 873036 873044 EHF JASPAR yes 49187824
chr4 873036 873044 FEV JASPAR yes 49187825
chr4 873069 873073 NFE TRANSFAC yes 49187826
chr4 873073 873083 NEUROD2 JASPAR yes 49187827
chr4 873073 873083 OLIG2 JASPAR yes 49187828
chr4 873073 873083 OLIG3 JASPAR yes 49187829
chr4 873088 873092 NFE TRANSFAC yes 49187830
chr4 873095 873104 SRY JASPAR yes 49187831
chr4 873137 873145 RHOXF1 JASPAR yes 49187832
chr4 873147 873159 YY1 JASPAR yes 49187833
chr4 873172 873187 LEF1 JASPAR yes 49187834
chr4 873181 873202 IRF1 JASPAR yes 49187835
chr4 873186 873204 IRF2 JASPAR yes 49187836
chr4 873187 873208 IRF1 JASPAR yes 49187837
chr4 873189 873204 STAT2 JASPAR yes 49187838
chr4 873190 873204 STAT1 JASPAR yes 49187839
chr4 873191 873206 IRF9 JASPAR yes 49187840
chr4 873194 873209 FOXP1 JASPAR yes 49187841
chr4 873197 873218 ZNF263 JASPAR yes 49187842
chr4 873229 873250 IRF1 JASPAR yes 49187843
chr4 873230 873245 FOXP1 JASPAR yes 49187844
chr4 873231 873243 FOXC2 JASPAR yes 49187845
chr4 873233 873241 FOXO3 JASPAR yes 49187846
chr4 873235 873256 IRF1 JASPAR yes 49187847
chr4 873237 873242 ETS2 TRANSFAC yes 49187848
chr4 873237 873252 PRDM1 JASPAR yes 49187849
chr4 873243 873254 ELK4 JASPAR yes 49187850
chr4 873243 873254 FLI1 JASPAR yes 49187851
chr4 873243 873256 ELF3 JASPAR yes 49187852
chr4 873244 873254 ELK1 JASPAR yes 49187853
chr4 873244 873254 ELK3 JASPAR yes 49187854
chr4 873244 873254 ERF JASPAR yes 49187855
chr4 873244 873254 ERG JASPAR yes 49187856
chr4 873244 873254 ETS1 JASPAR yes 49187857
chr4 873244 873254 ETV1 JASPAR yes 49187858
chr4 873244 873254 ETV3 JASPAR yes 49187859
chr4 873244 873254 ETV4 JASPAR yes 49187860
chr4 873244 873254 ETV6 JASPAR yes 49187861
chr4 873244 873254 FEV JASPAR yes 49187862
chr4 873244 873254 FLI1 JASPAR yes 49187863
chr4 873244 873255 ELF5 JASPAR yes 49187864
chr4 873244 873255 ETV2 JASPAR yes 49187865
chr4 873244 873255 SPDEF JASPAR yes 49187866
chr4 873244 873256 EHF JASPAR yes 49187867
chr4 873244 873256 ELF1 JASPAR yes 49187868
chr4 873244 873256 ELF4 JASPAR yes 49187869
chr4 873244 873257 ELF1 JASPAR yes 49187870
chr4 873244 873258 SPIC JASPAR yes 49187871
chr4 873245 873252 SPI1 JASPAR yes 49187872
chr4 873245 873253 EHF JASPAR yes 49187873
chr4 873245 873253 FEV JASPAR yes 49187874
chr4 873260 873270 ALX3 JASPAR yes 49187875
chr4 873260 873270 EMX1 JASPAR yes 49187876
chr4 873260 873270 HOXB2 JASPAR yes 49187877
chr4 873260 873270 HOXB3 JASPAR yes 49187878
chr4 873260 873270 MEOX2 JASPAR yes 49187879
chr4 873260 873270 MNX1 JASPAR yes 49187880
chr4 873261 873269 LMX1A JASPAR yes 49187881
chr4 873261 873269 LMX1B JASPAR yes 49187882
chr4 873261 873269 NKX6-1 JASPAR yes 49187883
chr4 873261 873269 NKX6-2 JASPAR yes 49187884
chr4 873261 873269 PDX1 JASPAR yes 49187885
chr4 873261 873269 VAX1 JASPAR yes 49187886
chr4 873261 873269 VAX2 JASPAR yes 49187887
chr4 873261 873269 VSX1 JASPAR yes 49187888
chr4 873276 873294 NR3C1 JASPAR yes 49187889
chr4 873287 873302 AR JASPAR yes 49187890
chr4 873291 873302 FOXA1 JASPAR yes 49187891
SNP sites on vista43865[chr4:872986-873338]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 873023 rs77689311 C T no 7343014
chr4 873171 rs137997855 C T no 7343015
chr4 873181 rs57445359 G T
IRF1 LEF1
7343016
chr4 873245 rs115049296 T C
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV6 FEV FLI1 FOXP1 IRF1 PRDM1 SPDEF SPI1 SPIC
7343017
chr4 873286 rs35541465 CCTTA C
NR3C1
7343018
chr4 873286 rs56346593 CCTTA C
NR3C1
7343019
chr4 873313 rs75067454 C T no 7343020
Genes possibly regulated by vista43865[chr4:872986-873338]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 778745 819986 - CPLX1 ENSG00000168993.10 819986 0.81 1.0 4444 47000
chr4 843064 926161 - GAK ENSG00000178950.12 926161 0.59 1.0 4445 47177
chr4 926175 952444 + TMEM175 ENSG00000127419.12 926175 0.67 1.0 4446 47163
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43865[chr4:872986-873338]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results