EnhancerDB
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  3. vista43866[chr4:873387-873975]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43866[chr4:873387-873975]
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Tissue distribution of vista43866
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Transcription factor that possibly regulate vista43866[chr4:873387-873975]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 873445 873460 LEF1 JASPAR yes 49187892
chr4 873446 873460 TCF7L2 JASPAR yes 49187893
chr4 873461 873474 NR2F1 JASPAR yes 49187894
chr4 873464 873472 NR4A2 JASPAR yes 49187895
chr4 873464 873479 HNF4A JASPAR yes 49187896
chr4 873465 873479 NR2F1 JASPAR yes 49187897
chr4 873465 873479 RXRG JASPAR yes 49187898
chr4 873465 873480 HNF4G JASPAR yes 49187899
chr4 873465 873480 NR2C2 JASPAR yes 49187900
chr4 873480 873495 SCRT1 JASPAR yes 49187901
chr4 873482 873495 SCRT2 JASPAR yes 49187902
chr4 873496 873501 GATA1 TRANSFAC yes 49187903
chr4 873501 873512 FOS JASPAR yes 49187904
chr4 873502 873513 FOSL2 JASPAR yes 49187905
chr4 873503 873514 BATF JASPAR yes 49187906
chr4 873507 873522 STAT1 JASPAR yes 49187907
chr4 873509 873520 STAT1 JASPAR yes 49187908
chr4 873509 873520 STAT3 JASPAR yes 49187909
chr4 873509 873524 HSF1 JASPAR yes 49187910
chr4 873510 873518 STAT6 TRANSFAC yes 49187911
chr4 873510 873523 HSF1 JASPAR yes 49187912
chr4 873514 873525 NFKB1 JASPAR yes 49187913
chr4 873531 873536 H4TF1 TRANSFAC yes 49187914
chr4 873537 873558 ZNF263 JASPAR yes 49187915
chr4 873542 873553 E2F6 JASPAR yes 49187916
chr4 873549 873560 E2F6 JASPAR yes 49187917
chr4 873573 873580 USF1 JASPAR yes 49187918
chr4 873574 873579 MYC TRANSFAC yes 49187919
chr4 873574 873579 USF1 TRANSFAC yes 49187920
chr4 873574 873579 USF2 TRANSFAC yes 49187921
chr4 873625 873639 GLIS2 JASPAR yes 49187922
chr4 873631 873646 PRDM1 JASPAR yes 49187923
chr4 873641 873662 IRF1 JASPAR yes 49187924
chr4 873644 873657 DUXA JASPAR yes 49187925
chr4 873645 873656 BATF JASPAR yes 49187926
chr4 873645 873656 DUX4 JASPAR yes 49187927
chr4 873645 873659 IRF7 JASPAR yes 49187928
chr4 873645 873659 IRF8 JASPAR yes 49187929
chr4 873645 873660 IRF9 JASPAR yes 49187930
chr4 873647 873668 IRF1 JASPAR yes 49187931
chr4 873649 873664 STAT2 JASPAR yes 49187932
chr4 873650 873664 STAT1 JASPAR yes 49187933
chr4 873651 873663 IRF1 JASPAR yes 49187934
chr4 873651 873665 IRF8 JASPAR yes 49187935
chr4 873651 873666 IRF9 JASPAR yes 49187936
chr4 873658 873663 GATA1 TRANSFAC yes 49187937
chr4 873671 873686 HNF4G JASPAR yes 49187938
chr4 873672 873686 NR2F1 JASPAR yes 49187939
chr4 873672 873687 HNF4A JASPAR yes 49187940
chr4 873684 873695 JUNB JASPAR yes 49187941
chr4 873685 873696 FOS JASPAR yes 49187942
chr4 873685 873696 FOSL1 JASPAR yes 49187943
chr4 873685 873696 JUND JASPAR yes 49187944
chr4 873686 873697 FOSL2 JASPAR yes 49187945
chr4 873686 873697 JUNB JASPAR yes 49187946
chr4 873686 873697 NFE2L2 JASPAR yes 49187947
chr4 873686 873700 JUN JASPAR yes 49187948
chr4 873687 873698 BATF JASPAR yes 49187949
chr4 873719 873723 YY1 TRANSFAC yes 49187950
chr4 873724 873737 NFKB1 JASPAR yes 49187951
chr4 873725 873735 NFKB1 JASPAR yes 49187952
chr4 873725 873735 RELA JASPAR yes 49187953
chr4 873725 873735 REL JASPAR yes 49187954
chr4 873725 873736 NFKB1 JASPAR yes 49187955
chr4 873726 873736 RELA JASPAR yes 49187956
chr4 873728 873733 H4TF1 TRANSFAC yes 49187957
chr4 873732 873746 POU1F1 JASPAR yes 49187958
chr4 873733 873745 POU3F2 JASPAR yes 49187959
chr4 873734 873738 YY1 TRANSFAC yes 49187960
chr4 873734 873746 POU2F1 JASPAR yes 49187961
chr4 873742 873746 YY1 TRANSFAC yes 49187962
chr4 873742 873757 STAT1 JASPAR yes 49187963
chr4 873743 873751 FEV JASPAR yes 49187964
chr4 873744 873755 STAT1 JASPAR yes 49187965
chr4 873744 873755 STAT3 JASPAR yes 49187966
chr4 873749 873759 REL JASPAR yes 49187967
chr4 873749 873760 NFKB1 JASPAR yes 49187968
chr4 873752 873756 YY1 TRANSFAC yes 49187969
chr4 873787 873796 ZEB1 JASPAR yes 49187970
chr4 873788 873798 ID4 JASPAR yes 49187971
chr4 873788 873798 NHLH1 JASPAR yes 49187972
chr4 873788 873798 TCF3 JASPAR yes 49187973
chr4 873788 873798 TCF4 JASPAR yes 49187974
chr4 873789 873798 SNAI2 JASPAR yes 49187975
chr4 873790 873795 USF2 TRANSFAC yes 49187976
chr4 873791 873806 TFAP2A JASPAR yes 49187977
chr4 873791 873806 TFAP2C JASPAR yes 49187978
chr4 873793 873808 TFAP2C JASPAR yes 49187979
chr4 873794 873805 TFAP2A JASPAR yes 49187980
chr4 873794 873805 TFAP2B JASPAR yes 49187981
chr4 873794 873805 TFAP2C JASPAR yes 49187982
chr4 873802 873806 H4TF2 TRANSFAC yes 49187983
chr4 873852 873863 GCM1 JASPAR yes 49187984
chr4 873858 873862 H4TF2 TRANSFAC yes 49187985
chr4 873908 873919 GCM1 JASPAR yes 49187986
chr4 873914 873918 H4TF2 TRANSFAC yes 49187987
chr4 873916 873937 REST JASPAR yes 49187988
chr4 873919 873929 NFATC3 JASPAR yes 49187989
chr4 873964 873975 GCM1 JASPAR yes 49187990
chr4 873970 873974 H4TF2 TRANSFAC yes 49187991
SNP sites on vista43866[chr4:873387-873975]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 873417 rs58036322 T G no 7343021
chr4 873598 rs569933832 G A no 7343022
chr4 873634 rs114972061 G A
GLIS2 PRDM1
7343023
chr4 873750 rs181165461 T G
FEV NFKB1 REL STAT1 STAT3
7343024
chr4 873767 rs546800669 TG T no 7343025
chr4 873832 rs115785203 C G no 7343026
chr4 873901 rs144026795 G A no 7343027
Genes possibly regulated by vista43866[chr4:873387-873975]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 778745 819986 - CPLX1 ENSG00000168993.10 819986 0.81 1.0 4444 46599
chr4 843064 926161 - GAK ENSG00000178950.12 926161 0.59 1.0 4445 47814
chr4 926175 952444 + TMEM175 ENSG00000127419.12 926175 0.67 1.0 4446 47800
Expression level of Genes
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miRNAs possibly regulated by vista43866[chr4:873387-873975]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results