EnhancerDB
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  3. vista43870[chr4:926994-927308]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43870[chr4:926994-927308]
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Tissue distribution of vista43870
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Transcription factor that possibly regulate vista43870[chr4:926994-927308]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 926994 926998 NFE TRANSFAC yes 49188203
chr4 926998 927002 YY1 TRANSFAC yes 49188204
chr4 927023 927036 SMAD2 JASPAR yes 49188205
chr4 927028 927040 PKNOX1 JASPAR yes 49188206
chr4 927028 927040 TGIF1 JASPAR yes 49188207
chr4 927029 927039 FIGLA JASPAR yes 49188208
chr4 927029 927039 ID4 JASPAR yes 49188209
chr4 927029 927039 TCF3 JASPAR yes 49188210
chr4 927029 927039 TCF4 JASPAR yes 49188211
chr4 927030 927039 SNAI2 JASPAR yes 49188212
chr4 927031 927036 USF2 TRANSFAC yes 49188213
chr4 927065 927070 SP1 TRANSFAC yes 49188214
chr4 927070 927081 USF1 JASPAR yes 49188215
chr4 927070 927081 USF2 JASPAR yes 49188216
chr4 927071 927081 SREBF2 JASPAR yes 49188217
chr4 927073 927078 USF2 TRANSFAC yes 49188218
chr4 927076 927089 NR2F1 JASPAR yes 49188219
chr4 927077 927085 CREB1 JASPAR yes 49188220
chr4 927080 927084 ESR1 TRANSFAC yes 49188221
chr4 927103 927107 ESR1 TRANSFAC yes 49188222
chr4 927106 927118 YY1 JASPAR yes 49188223
chr4 927110 927121 CEBPB JASPAR yes 49188224
chr4 927111 927124 NFKB1 JASPAR yes 49188225
chr4 927111 927124 NFKB2 JASPAR yes 49188226
chr4 927127 927142 MEF2C JASPAR yes 49188227
chr4 927128 927143 MEF2A JASPAR yes 49188228
chr4 927129 927141 MEF2A JASPAR yes 49188229
chr4 927129 927141 MEF2B JASPAR yes 49188230
chr4 927129 927141 MEF2D JASPAR yes 49188231
chr4 927141 927160 PAX5 JASPAR yes 49188232
chr4 927160 927165 SP1 TRANSFAC yes 49188233
chr4 927222 927227 SP1 TRANSFAC yes 49188234
chr4 927223 927228 SP1 TRANSFAC yes 49188235
chr4 927252 927260 SP1 TRANSFAC yes 49188236
chr4 927259 927271 MEF2D JASPAR yes 49188237
chr4 927261 927275 FOXF2 JASPAR yes 49188238
chr4 927261 927275 ONECUT2 JASPAR yes 49188239
chr4 927261 927275 ONECUT3 JASPAR yes 49188240
chr4 927261 927276 FOXP1 JASPAR yes 49188241
chr4 927262 927277 FOXA1 JASPAR yes 49188242
chr4 927262 927278 POU4F3 JASPAR yes 49188243
chr4 927263 927274 FOXB1 JASPAR yes 49188244
chr4 927263 927274 FOXC1 JASPAR yes 49188245
chr4 927263 927275 FOXC2 JASPAR yes 49188246
chr4 927264 927276 FOXI1 JASPAR yes 49188247
chr4 927288 927293 MYB TRANSFAC yes 49188248
SNP sites on vista43870[chr4:926994-927308]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 927030 rs150782302 TAC T
FIGLA ID4 PKNOX1 SMAD2 SNAI2 TCF3 TCF4 TGIF1
7343363
chr4 927030 rs868353137 TAC T
FIGLA ID4 PKNOX1 SMAD2 SNAI2 TCF3 TCF4 TGIF1
7343364
chr4 927158 rs112172867 G A
PAX5
7343365
chr4 927230 rs192239619 C T no 7343366
chr4 927269 rs578024483 A AAAC
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 MEF2D ONECUT2 ONECUT3 POU4F3
7343367
chr4 927272 rs565580157 T C
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXI1 FOXP1 ONECUT2 ONECUT3 POU4F3
7343368
Genes possibly regulated by vista43870[chr4:926994-927308]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 843064 926161 - GAK ENSG00000178950.12 926161 0.59 1.0 4445 99167
chr4 926175 952444 + TMEM175 ENSG00000127419.12 926175 0.67 1.0 4446 99181
chr4 952675 980683 - DGKQ ENSG00000145214.9 980683 0.68 1.0 4447 46625
chr4 972861 987228 - SLC26A1 ENSG00000145217.9 987228 0.91 1.0 4448 40080
chr4 980785 998316 + IDUA ENSG00000127415.8 980785 0.63 1.0 4449 46523
chr4 1003724 1020685 + FGFRL1 ENSG00000127418.10 1003724 0.87 1.0 4450 23584
Expression level of Genes
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miRNAs possibly regulated by vista43870[chr4:926994-927308]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results