EnhancerDB
  1. Home
  2. Enhancers
  3. vista43873[chr4:1027686-1027967]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43873[chr4:1027686-1027967]
Back to top
Tissue distribution of vista43873
Back to top
Transcription factor that possibly regulate vista43873[chr4:1027686-1027967]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1027750 1027760 SP1 JASPAR yes 49188353
chr4 1027750 1027760 SP1 JASPAR yes 87791511
chr4 1027752 1027758 MAZ TRANSFAC yes 49188354
chr4 1027752 1027758 MAZ TRANSFAC yes 87791512
chr4 1027755 1027765 SP1 JASPAR yes 49188355
chr4 1027755 1027765 SP1 JASPAR yes 87791513
chr4 1027756 1027764 SP1 TRANSFAC yes 49188356
chr4 1027756 1027764 SP1 TRANSFAC yes 87791514
chr4 1027756 1027765 SP1 TRANSFAC yes 49188357
chr4 1027756 1027765 SP1 TRANSFAC yes 87791515
chr4 1027756 1027774 RARA JASPAR yes 49188358
chr4 1027756 1027774 RARA JASPAR yes 87791516
chr4 1027757 1027762 SP1 TRANSFAC yes 49188359
chr4 1027757 1027762 SP1 TRANSFAC yes 87791517
chr4 1027758 1027763 SP1 TRANSFAC yes 49188360
chr4 1027758 1027763 SP1 TRANSFAC yes 87791518
chr4 1027758 1027764 SP1 TRANSFAC yes 49188361
chr4 1027758 1027764 SP1 TRANSFAC yes 87791519
chr4 1027762 1027767 SP1 TRANSFAC yes 49188362
chr4 1027762 1027767 SP1 TRANSFAC yes 87791520
chr4 1027765 1027785 ESR1 JASPAR yes 49188363
chr4 1027765 1027785 ESR1 JASPAR yes 87791521
chr4 1027766 1027770 ESR1 TRANSFAC yes 49188364
chr4 1027766 1027770 ESR1 TRANSFAC yes 87791522
chr4 1027769 1027787 ESR1 JASPAR yes 49188365
chr4 1027769 1027787 ESR1 JASPAR yes 87791523
chr4 1027799 1027804 ETS2 TRANSFAC yes 49188366
chr4 1027799 1027804 ETS2 TRANSFAC yes 87791524
chr4 1027821 1027835 SPIC JASPAR yes 49188367
chr4 1027821 1027835 SPIC JASPAR yes 87791525
chr4 1027821 1027842 ZNF263 JASPAR yes 49188368
chr4 1027821 1027842 ZNF263 JASPAR yes 87791526
chr4 1027823 1027844 IRF1 JASPAR yes 49188369
chr4 1027823 1027844 IRF1 JASPAR yes 87791527
chr4 1027825 1027840 STAT2 JASPAR yes 49188370
chr4 1027825 1027840 STAT2 JASPAR yes 87791528
chr4 1027830 1027851 ZNF263 JASPAR yes 49188371
chr4 1027830 1027851 ZNF263 JASPAR yes 87791529
chr4 1027833 1027854 ZNF263 JASPAR yes 49188372
chr4 1027833 1027854 ZNF263 JASPAR yes 87791530
chr4 1027834 1027855 ZNF263 JASPAR yes 49188373
chr4 1027834 1027855 ZNF263 JASPAR yes 87791531
chr4 1027835 1027842 SPIB JASPAR yes 49188374
chr4 1027835 1027842 SPIB JASPAR yes 87791532
chr4 1027835 1027850 PRDM1 JASPAR yes 49188375
chr4 1027835 1027850 PRDM1 JASPAR yes 87791533
chr4 1027837 1027858 ZNF263 JASPAR yes 49188376
chr4 1027837 1027858 ZNF263 JASPAR yes 87791534
chr4 1027842 1027863 ZNF263 JASPAR yes 49188377
chr4 1027842 1027863 ZNF263 JASPAR yes 87791535
chr4 1027856 1027861 ETS2 TRANSFAC yes 49188378
chr4 1027856 1027861 ETS2 TRANSFAC yes 87791536
chr4 1027858 1027866 EHF JASPAR yes 49188379
chr4 1027858 1027866 EHF JASPAR yes 87791537
chr4 1027869 1027875 SP1 TRANSFAC yes 49188380
chr4 1027869 1027875 SP1 TRANSFAC yes 87791538
chr4 1027891 1027910 CTCF JASPAR yes 49188381
chr4 1027891 1027910 CTCF JASPAR yes 87791539
chr4 1027903 1027915 GLI2 JASPAR yes 49188382
chr4 1027903 1027915 GLI2 JASPAR yes 87791540
chr4 1027909 1027915 SOX10 JASPAR yes 49188383
chr4 1027909 1027915 SOX10 JASPAR yes 87791541
chr4 1027931 1027935 H4TF2 TRANSFAC yes 49188384
chr4 1027931 1027935 H4TF2 TRANSFAC yes 87791542
chr4 1027931 1027950 CTCF JASPAR yes 49188385
chr4 1027931 1027950 CTCF JASPAR yes 87791543
chr4 1027935 1027950 ZIC4 JASPAR yes 49188386
chr4 1027935 1027950 ZIC4 JASPAR yes 87791544
chr4 1027936 1027950 ZIC1 JASPAR yes 49188387
chr4 1027936 1027950 ZIC1 JASPAR yes 87791545
chr4 1027942 1027947 SP1 TRANSFAC yes 49188388
chr4 1027942 1027947 SP1 TRANSFAC yes 87791546
chr4 1027943 1027953 SP1 JASPAR yes 49188389
chr4 1027943 1027953 SP1 JASPAR yes 87791547
chr4 1027946 1027951 SP1 TRANSFAC yes 49188390
chr4 1027946 1027951 SP1 TRANSFAC yes 87791548
chr4 1027946 1027952 SP1 TRANSFAC yes 49188391
chr4 1027946 1027952 SP1 TRANSFAC yes 87791549
chr4 1027955 1027965 SP1 JASPAR yes 49188392
chr4 1027955 1027965 SP1 JASPAR yes 87791550
chr4 1027962 1027973 E2F1 JASPAR yes 49188393
chr4 1027962 1027973 E2F1 JASPAR yes 87791551
chr4 1027963 1027968 SP1 TRANSFAC yes 49188394
chr4 1027963 1027968 SP1 TRANSFAC yes 87791552
SNP sites on vista43873[chr4:1027686-1027967]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1027785 rs558324403 C A
ESR1
7343851
chr4 1027837 rs576581499 T C
IRF1 PRDM1 SPIB STAT2 ZNF263
7343852
chr4 1027843 rs150953831 C T
IRF1 PRDM1 ZNF263
7343853
chr4 1027846 rs555234996 T A
PRDM1 ZNF263
7343854
chr4 1027903 rs572161747 G A
CTCF GLI2
7343855
chr4 1027942 rs144190735 C T
CTCF SP1 ZIC1 ZIC4
7343856
Genes possibly regulated by vista43873[chr4:1027686-1027967]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 952675 980683 - DGKQ ENSG00000145214.9 980683 0.68 1.0 4447 52997
chr4 972861 987228 - SLC26A1 ENSG00000145217.9 987228 0.91 1.0 4448 59542
chr4 980785 998316 + IDUA ENSG00000127415.8 980785 0.63 1.0 4449 53099
chr4 1003724 1020685 + FGFRL1 ENSG00000127418.10 1003724 0.87 1.0 4450 76038
chr4 1050038 1107350 - RNF212 ENSG00000178222.8 1107350 0.86 0.97 4451 20617
Expression level of Genes
Back to top
miRNAs possibly regulated by vista43873[chr4:1027686-1027967]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results