EnhancerDB
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  3. vista43880[chr4:1129933-1130282]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43880[chr4:1129933-1130282]
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Tissue distribution of vista43880
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Transcription factor that possibly regulate vista43880[chr4:1129933-1130282]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1129942 1129950 TBX5 JASPAR yes 49188636
chr4 1129942 1129950 TBX5 JASPAR yes 87796436
chr4 1129942 1129951 ZEB1 JASPAR yes 49188637
chr4 1129942 1129951 ZEB1 JASPAR yes 87796437
chr4 1129942 1129954 NHLH1 JASPAR yes 49188638
chr4 1129942 1129954 NHLH1 JASPAR yes 87796438
chr4 1129943 1129953 ID4 JASPAR yes 49188639
chr4 1129943 1129953 NHLH1 JASPAR yes 49188640
chr4 1129943 1129953 TCF3 JASPAR yes 49188641
chr4 1129943 1129953 TCF4 JASPAR yes 49188642
chr4 1129943 1129953 ID4 JASPAR yes 87796439
chr4 1129943 1129953 NHLH1 JASPAR yes 87796440
chr4 1129943 1129953 TCF3 JASPAR yes 87796441
chr4 1129943 1129953 TCF4 JASPAR yes 87796442
chr4 1129944 1129953 SNAI2 JASPAR yes 49188643
chr4 1129944 1129953 SNAI2 JASPAR yes 87796443
chr4 1129945 1129950 USF2 TRANSFAC yes 49188644
chr4 1129945 1129950 USF2 TRANSFAC yes 87796444
chr4 1129971 1129986 TFAP2A JASPAR yes 49188645
chr4 1129971 1129986 TFAP2C JASPAR yes 49188646
chr4 1129971 1129986 TFAP2A JASPAR yes 87796445
chr4 1129971 1129986 TFAP2C JASPAR yes 87796446
chr4 1129976 1129997 ZNF263 JASPAR yes 49188647
chr4 1129976 1129997 ZNF263 JASPAR yes 87796447
chr4 1129977 1129991 PLAG1 JASPAR yes 49188648
chr4 1129977 1129991 PLAG1 JASPAR yes 87796448
chr4 1129984 1130005 ZNF263 JASPAR yes 49188649
chr4 1129984 1130005 ZNF263 JASPAR yes 87796449
chr4 1129986 1129991 ETS2 TRANSFAC yes 49188650
chr4 1129986 1129991 ETS2 TRANSFAC yes 87796450
chr4 1129995 1130006 E2F6 JASPAR yes 49188651
chr4 1129995 1130006 E2F6 JASPAR yes 87796451
chr4 1129996 1130001 SP1 TRANSFAC yes 49188652
chr4 1129996 1130001 SP1 TRANSFAC yes 87796452
chr4 1130017 1130027 ID4 JASPAR yes 49188653
chr4 1130017 1130027 TCF3 JASPAR yes 49188654
chr4 1130017 1130027 TCF4 JASPAR yes 49188655
chr4 1130017 1130027 ID4 JASPAR yes 87796453
chr4 1130017 1130027 TCF3 JASPAR yes 87796454
chr4 1130017 1130027 TCF4 JASPAR yes 87796455
chr4 1130018 1130027 SNAI2 JASPAR yes 49188656
chr4 1130018 1130027 SNAI2 JASPAR yes 87796456
chr4 1130019 1130024 USF2 TRANSFAC yes 49188657
chr4 1130019 1130024 USF2 TRANSFAC yes 87796457
chr4 1130039 1130048 NFIX JASPAR yes 49188658
chr4 1130039 1130048 NFIX JASPAR yes 87796458
chr4 1130039 1130049 NFIA JASPAR yes 49188659
chr4 1130039 1130049 NFIA JASPAR yes 87796459
chr4 1130041 1130047 NFIC JASPAR yes 49188660
chr4 1130041 1130047 NFIC JASPAR yes 87796460
chr4 1130070 1130078 GATA5 JASPAR yes 49188661
chr4 1130070 1130078 GATA5 JASPAR yes 87796461
chr4 1130087 1130101 STAT1 JASPAR yes 49188662
chr4 1130087 1130101 STAT1 JASPAR yes 87796462
chr4 1130091 1130096 ETS2 TRANSFAC yes 49188663
chr4 1130091 1130096 ETS2 TRANSFAC yes 87796463
chr4 1130116 1130127 CEBPA JASPAR yes 49188664
chr4 1130116 1130127 CEBPA JASPAR yes 87796464
chr4 1130116 1130128 HLF JASPAR yes 49188665
chr4 1130116 1130128 HLF JASPAR yes 87796465
chr4 1130117 1130128 CEBPB JASPAR yes 49188666
chr4 1130117 1130128 CEBPB JASPAR yes 87796466
chr4 1130121 1130131 GBX2 JASPAR yes 49188667
chr4 1130121 1130131 MNX1 JASPAR yes 49188668
chr4 1130121 1130131 GBX2 JASPAR yes 87796467
chr4 1130121 1130131 MNX1 JASPAR yes 87796468
chr4 1130122 1130130 BARX1 JASPAR yes 49188669
chr4 1130122 1130130 BSX JASPAR yes 49188670
chr4 1130122 1130130 ISL2 JASPAR yes 49188671
chr4 1130122 1130130 LMX1B JASPAR yes 49188672
chr4 1130122 1130130 MSX1 JASPAR yes 49188673
chr4 1130122 1130130 MSX2 JASPAR yes 49188674
chr4 1130122 1130130 BARX1 JASPAR yes 87796469
chr4 1130122 1130130 BSX JASPAR yes 87796470
chr4 1130122 1130130 ISL2 JASPAR yes 87796471
chr4 1130122 1130130 LMX1B JASPAR yes 87796472
chr4 1130122 1130130 MSX1 JASPAR yes 87796473
chr4 1130122 1130130 MSX2 JASPAR yes 87796474
chr4 1130131 1130137 ZNF354C JASPAR yes 49188675
chr4 1130131 1130137 ZNF354C JASPAR yes 87796475
chr4 1130159 1130165 SOX10 JASPAR yes 49188676
chr4 1130159 1130165 SOX10 JASPAR yes 87796476
chr4 1130165 1130176 FOXP2 JASPAR yes 49188677
chr4 1130165 1130176 FOXP2 JASPAR yes 87796477
chr4 1130173 1130177 NFE TRANSFAC yes 49188678
chr4 1130173 1130177 NFE TRANSFAC yes 87796478
chr4 1130174 1130179 GATA2 JASPAR yes 49188679
chr4 1130174 1130179 GATA2 JASPAR yes 87796479
chr4 1130181 1130197 RFX4 JASPAR yes 49188680
chr4 1130181 1130197 RFX4 JASPAR yes 87796480
chr4 1130203 1130208 TFAP2A TRANSFAC yes 49188681
chr4 1130203 1130208 TFAP2A TRANSFAC yes 87796481
chr4 1130203 1130209 MZF1 JASPAR yes 49188682
chr4 1130203 1130209 MZF1 JASPAR yes 87796482
chr4 1130205 1130210 ETS2 TRANSFAC yes 49188683
chr4 1130205 1130210 ETS2 TRANSFAC yes 87796483
chr4 1130231 1130246 MEF2A JASPAR yes 49188684
chr4 1130231 1130246 MEF2A JASPAR yes 87796484
chr4 1130232 1130247 MEF2C JASPAR yes 49188685
chr4 1130232 1130247 MEF2C JASPAR yes 87796485
chr4 1130233 1130245 MEF2A JASPAR yes 49188686
chr4 1130233 1130245 MEF2B JASPAR yes 49188687
chr4 1130233 1130245 MEF2D JASPAR yes 49188688
chr4 1130233 1130245 MEF2A JASPAR yes 87796486
chr4 1130233 1130245 MEF2B JASPAR yes 87796487
chr4 1130233 1130245 MEF2D JASPAR yes 87796488
chr4 1130234 1130244 MEF2A JASPAR yes 49188689
chr4 1130234 1130244 MEF2A JASPAR yes 87796489
chr4 1130235 1130239 YY1 TRANSFAC yes 49188690
chr4 1130235 1130239 YY1 TRANSFAC yes 87796490
chr4 1130248 1130263 FOXP1 JASPAR yes 49188691
chr4 1130248 1130263 FOXP1 JASPAR yes 87796491
chr4 1130250 1130265 FOXP1 JASPAR yes 49188692
chr4 1130250 1130265 FOXP1 JASPAR yes 87796492
chr4 1130253 1130264 FOXP2 JASPAR yes 49188693
chr4 1130253 1130264 FOXP2 JASPAR yes 87796493
chr4 1130275 1130286 NRL JASPAR yes 49188694
chr4 1130275 1130286 NRL JASPAR yes 87796494
chr4 1130275 1130290 MAFK JASPAR yes 49188695
chr4 1130275 1130290 MAFK JASPAR yes 87796495
SNP sites on vista43880[chr4:1129933-1130282]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1129975 rs4974627 C G
TFAP2A TFAP2C
7344419
chr4 1130048 rs537976674 GTGCTCTGC G
NFIA NFIX
7344420
chr4 1130178 rs149723109 C T
GATA2
7344421
chr4 1130203 rs75307101 T A
MZF1 TFAP2A
7344422
chr4 1130240 rs560365877 T G
MEF2A MEF2B MEF2C MEF2D
7344423
Genes possibly regulated by vista43880[chr4:1129933-1130282]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1050038 1107350 - RNF212 ENSG00000178222.8 1107350 0.86 0.97 4451 77417
chr4 1160720 1202750 - SPON2 ENSG00000159674.7 1202750 0.83 0.99 4452 27532
Expression level of Genes
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miRNAs possibly regulated by vista43880[chr4:1129933-1130282]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results