EnhancerDB
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  3. vista43881[chr4:1170900-1171323]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43881[chr4:1170900-1171323]
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Tissue distribution of vista43881
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Transcription factor that possibly regulate vista43881[chr4:1170900-1171323]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1170900 1170912 TFAP2A JASPAR yes 49188696
chr4 1170900 1170912 TFAP2B JASPAR yes 49188697
chr4 1170900 1170912 TFAP2C JASPAR yes 49188698
chr4 1170900 1170912 TFAP2A JASPAR yes 87797912
chr4 1170900 1170912 TFAP2B JASPAR yes 87797913
chr4 1170900 1170912 TFAP2C JASPAR yes 87797914
chr4 1170963 1170967 NFE TRANSFAC yes 49188699
chr4 1170963 1170967 NFE TRANSFAC yes 87797915
chr4 1170967 1170979 NHLH1 JASPAR yes 49188700
chr4 1170967 1170979 NHLH1 JASPAR yes 87797916
chr4 1170968 1170978 NHLH1 JASPAR yes 49188701
chr4 1170968 1170978 NHLH1 JASPAR yes 87797917
chr4 1170975 1170979 LFA1 TRANSFAC yes 49188702
chr4 1170975 1170979 LFA1 TRANSFAC yes 87797918
chr4 1171002 1171021 CTCF JASPAR yes 49188703
chr4 1171002 1171021 CTCF JASPAR yes 87797919
chr4 1171004 1171023 PAX5 JASPAR yes 49188704
chr4 1171004 1171023 PAX5 JASPAR yes 87797920
chr4 1171006 1171016 FIGLA JASPAR yes 49188705
chr4 1171006 1171016 FIGLA JASPAR yes 87797921
chr4 1171008 1171013 USF2 TRANSFAC yes 49188706
chr4 1171008 1171013 USF2 TRANSFAC yes 87797922
chr4 1171020 1171034 CREB3L1 JASPAR yes 49188707
chr4 1171020 1171034 CREB3L1 JASPAR yes 87797923
chr4 1171051 1171062 TBX2 JASPAR yes 49188708
chr4 1171051 1171062 TBX2 JASPAR yes 87797924
chr4 1171068 1171083 RUNX2 JASPAR yes 49188709
chr4 1171068 1171083 RUNX2 JASPAR yes 87797925
chr4 1171096 1171110 JUN JASPAR yes 49188710
chr4 1171096 1171110 JUN JASPAR yes 87797926
chr4 1171099 1171110 JUNB JASPAR yes 49188711
chr4 1171099 1171110 JUNB JASPAR yes 87797927
chr4 1171100 1171111 FOSL1 JASPAR yes 49188712
chr4 1171100 1171111 JUND JASPAR yes 49188713
chr4 1171100 1171111 FOSL1 JASPAR yes 87797928
chr4 1171100 1171111 JUND JASPAR yes 87797929
chr4 1171102 1171108 JUN TRANSFAC yes 49188714
chr4 1171102 1171108 JUN TRANSFAC yes 87797930
chr4 1171112 1171124 GLI2 JASPAR yes 49188715
chr4 1171112 1171124 GLI2 JASPAR yes 87797931
chr4 1171130 1171140 NFIA JASPAR yes 49188716
chr4 1171130 1171140 NFIA JASPAR yes 87797932
chr4 1171131 1171140 NFIX JASPAR yes 49188717
chr4 1171131 1171140 NFIX JASPAR yes 87797933
chr4 1171132 1171138 NFIC JASPAR yes 49188718
chr4 1171132 1171138 NFIC JASPAR yes 87797934
chr4 1171155 1171158 MYB TRANSFAC yes 49188719
chr4 1171155 1171158 MYB TRANSFAC yes 87797935
chr4 1171164 1171179 RFX5 JASPAR yes 49188720
chr4 1171164 1171179 RFX5 JASPAR yes 87797936
chr4 1171190 1171199 RUNX2 JASPAR yes 49188721
chr4 1171190 1171199 RUNX2 JASPAR yes 87797937
chr4 1171193 1171205 NHLH1 JASPAR yes 49188722
chr4 1171193 1171205 NHLH1 JASPAR yes 87797938
chr4 1171194 1171203 SNAI2 JASPAR yes 49188723
chr4 1171194 1171203 SNAI2 JASPAR yes 87797939
chr4 1171194 1171204 ID4 JASPAR yes 49188724
chr4 1171194 1171204 NHLH1 JASPAR yes 49188725
chr4 1171194 1171204 TCF3 JASPAR yes 49188726
chr4 1171194 1171204 TCF4 JASPAR yes 49188727
chr4 1171194 1171204 ID4 JASPAR yes 87797940
chr4 1171194 1171204 NHLH1 JASPAR yes 87797941
chr4 1171194 1171204 TCF3 JASPAR yes 87797942
chr4 1171194 1171204 TCF4 JASPAR yes 87797943
chr4 1171195 1171210 RFX5 JASPAR yes 49188728
chr4 1171195 1171210 RFX5 JASPAR yes 87797944
chr4 1171265 1171285 RREB1 JASPAR yes 49188729
chr4 1171265 1171285 RREB1 JASPAR yes 87797945
chr4 1171268 1171273 SP1 TRANSFAC yes 49188730
chr4 1171268 1171273 SP1 TRANSFAC yes 87797946
chr4 1171269 1171274 SP1 TRANSFAC yes 49188731
chr4 1171269 1171274 SP1 TRANSFAC yes 87797947
chr4 1171277 1171287 RELA JASPAR yes 49188732
chr4 1171277 1171287 REL JASPAR yes 49188733
chr4 1171277 1171287 RELA JASPAR yes 87797948
chr4 1171277 1171287 REL JASPAR yes 87797949
chr4 1171277 1171288 NFKB1 JASPAR yes 49188734
chr4 1171277 1171288 NFKB1 JASPAR yes 87797950
SNP sites on vista43881[chr4:1170900-1171323]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1170909 rs568888147 G A
TFAP2A TFAP2B TFAP2C
7344609
chr4 1171077 rs1383658 T C
RUNX2
7344610
chr4 1171112 rs1383659 A G
GLI2
7344611
chr4 1171200 rs145153914 G A
ID4 NHLH1 RFX5 SNAI2 TCF3 TCF4
7344612
chr4 1171320 rs61167830 G A no 7344613
Genes possibly regulated by vista43881[chr4:1170900-1171323]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1050038 1107350 - RNF212 ENSG00000178222.8 1107350 0.86 0.97 4451 36450
chr4 1160720 1202750 - SPON2 ENSG00000159674.7 1202750 0.83 0.99 4452 68573
chr4 1205236 1243741 - CTBP1 ENSG00000159692.11 1243741 0.69 1.0 4453 27582
Expression level of Genes
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miRNAs possibly regulated by vista43881[chr4:1170900-1171323]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results