EnhancerDB
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  3. vista43886[chr4:1339085-1339471]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista43886[chr4:1339085-1339471]
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Tissue distribution of vista43886
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Transcription factor that possibly regulate vista43886[chr4:1339085-1339471]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 1339086 1339100 JUN JASPAR yes 49188922
chr4 1339089 1339100 FOSL2 JASPAR yes 49188923
chr4 1339089 1339100 JUNB JASPAR yes 49188924
chr4 1339090 1339101 FOS JASPAR yes 49188925
chr4 1339090 1339101 FOSL1 JASPAR yes 49188926
chr4 1339090 1339101 JUND JASPAR yes 49188927
chr4 1339091 1339105 JUN JASPAR yes 49188928
chr4 1339092 1339099 JUN TRANSFAC yes 49188929
chr4 1339092 1339103 BATF JASPAR yes 49188930
chr4 1339094 1339112 NFYA JASPAR yes 49188931
chr4 1339099 1339109 ESX1 JASPAR yes 49188932
chr4 1339099 1339109 GBX1 JASPAR yes 49188933
chr4 1339099 1339109 GBX2 JASPAR yes 49188934
chr4 1339099 1339109 HESX1 JASPAR yes 49188935
chr4 1339099 1339109 LBX2 JASPAR yes 49188936
chr4 1339099 1339109 LHX2 JASPAR yes 49188937
chr4 1339099 1339109 RAX JASPAR yes 49188938
chr4 1339100 1339108 DLX6 JASPAR yes 49188939
chr4 1339100 1339108 MSX2 JASPAR yes 49188940
chr4 1339106 1339110 H4TF2 TRANSFAC yes 49188941
chr4 1339128 1339148 TP53 JASPAR yes 49188942
chr4 1339130 1339134 LFA1 TRANSFAC yes 49188943
chr4 1339130 1339150 TP63 JASPAR yes 49188944
chr4 1339131 1339149 TP53 JASPAR yes 49188945
chr4 1339132 1339147 TP53 JASPAR yes 49188946
chr4 1339132 1339151 REST JASPAR yes 49188947
chr4 1339159 1339170 FOSL2 JASPAR yes 49188948
chr4 1339175 1339196 LUN1 TRANSFAC yes 49188949
chr4 1339192 1339206 PLAG1 JASPAR yes 49188950
chr4 1339199 1339204 SP1 TRANSFAC yes 49188951
chr4 1339200 1339205 SP1 TRANSFAC yes 49188952
chr4 1339203 1339208 SP1 TRANSFAC yes 49188953
chr4 1339211 1339216 USF2 TRANSFAC yes 49188954
chr4 1339212 1339222 ETV3 JASPAR yes 49188955
chr4 1339226 1339246 ESR1 JASPAR yes 49188956
chr4 1339230 1339248 NR3C1 JASPAR yes 49188957
chr4 1339244 1339256 YY1 JASPAR yes 49188958
chr4 1339248 1339259 CEBPB JASPAR yes 49188959
chr4 1339249 1339262 NFKB1 JASPAR yes 49188960
chr4 1339249 1339262 NFKB2 JASPAR yes 49188961
chr4 1339284 1339303 REST JASPAR yes 49188962
chr4 1339288 1339298 SP1 JASPAR yes 49188963
chr4 1339298 1339303 SP1 TRANSFAC yes 49188964
chr4 1339307 1339311 NFE TRANSFAC yes 49188965
chr4 1339358 1339368 SP1 JASPAR yes 49188966
chr4 1339360 1339365 SP1 TRANSFAC yes 49188967
chr4 1339405 1339424 PAX5 JASPAR yes 49188968
chr4 1339409 1339420 NFE2L2 JASPAR yes 49188969
chr4 1339412 1339418 SOX10 JASPAR yes 49188970
chr4 1339423 1339429 SOX10 JASPAR yes 49188971
chr4 1339429 1339444 FOXP1 JASPAR yes 49188972
chr4 1339430 1339445 FOXP1 JASPAR yes 49188973
chr4 1339431 1339446 FOXP1 JASPAR yes 49188974
chr4 1339431 1339452 IRF1 JASPAR yes 49188975
chr4 1339432 1339447 FOXP1 JASPAR yes 49188976
chr4 1339432 1339453 IRF1 JASPAR yes 49188977
chr4 1339433 1339448 FOXP1 JASPAR yes 49188978
chr4 1339433 1339454 IRF1 JASPAR yes 49188979
chr4 1339434 1339449 FOXP1 JASPAR yes 49188980
chr4 1339434 1339455 IRF1 JASPAR yes 49188981
chr4 1339435 1339450 FOXP1 JASPAR yes 49188982
chr4 1339435 1339456 IRF1 JASPAR yes 49188983
chr4 1339436 1339451 FOXP1 JASPAR yes 49188984
chr4 1339436 1339457 IRF1 JASPAR yes 49188985
chr4 1339437 1339452 FOXP1 JASPAR yes 49188986
chr4 1339437 1339458 IRF1 JASPAR yes 49188987
chr4 1339438 1339453 FOXP1 JASPAR yes 49188988
chr4 1339438 1339459 IRF1 JASPAR yes 49188989
chr4 1339439 1339454 FOXP1 JASPAR yes 49188990
chr4 1339439 1339460 IRF1 JASPAR yes 49188991
chr4 1339440 1339455 FOXP1 JASPAR yes 49188992
chr4 1339440 1339461 IRF1 JASPAR yes 49188993
chr4 1339441 1339456 FOXP1 JASPAR yes 49188994
chr4 1339441 1339462 IRF1 JASPAR yes 49188995
chr4 1339442 1339457 FOXP1 JASPAR yes 49188996
chr4 1339442 1339463 IRF1 JASPAR yes 49188997
chr4 1339443 1339458 FOXP1 JASPAR yes 49188998
chr4 1339443 1339464 IRF1 JASPAR yes 49188999
chr4 1339444 1339459 FOXP1 JASPAR yes 49189000
chr4 1339444 1339465 IRF1 JASPAR yes 49189001
chr4 1339445 1339460 FOXP1 JASPAR yes 49189002
chr4 1339445 1339466 IRF1 JASPAR yes 49189003
chr4 1339446 1339461 FOXP1 JASPAR yes 49189004
chr4 1339447 1339462 FOXP1 JASPAR yes 49189005
chr4 1339447 1339468 IRF1 JASPAR yes 49189006
chr4 1339448 1339463 FOXP1 JASPAR yes 49189007
chr4 1339449 1339464 FOXP1 JASPAR yes 49189008
SNP sites on vista43886[chr4:1339085-1339471]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 1339119 rs532482982 CAGA C no 7345904
chr4 1339135 rs138914105 AGGCCCAGGCACGGT A
REST TP53 TP63
7345905
chr4 1339135 rs372435925 AGGCCCAGGCACGGT A
REST TP53 TP63
7345906
chr4 1339184 rs183011168 G A,C
LUN1
7345907
chr4 1339217 rs186979449 G T
ETV3
7345908
chr4 1339299 rs146850786 G T
REST SP1
7345909
chr4 1339302 rs191872918 G A
REST SP1
7345910
chr4 1339310 rs182539383 G A
NFE
7345911
chr4 1339337 rs187718546 G A no 7345912
chr4 1339424 rs566074938 CT C
PAX5 SOX10
7345913
Genes possibly regulated by vista43886[chr4:1339085-1339471]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 1205236 1243741 - CTBP1 ENSG00000159692.11 1243741 0.69 1.0 4453 4656
chr4 1283639 1333935 + MAEA ENSG00000090316.11 1283639 0.63 1.0 4454 44554
chr4 1341054 1381837 + UVSSA ENSG00000163945.11 1341054 0.69 1.0 4455 98417
chr4 1385340 1389780 + CRIPAK ENSG00000179979.7 1385340 0.71 1.0 4456 54131
chr4 1396720 1400119 - NKX1-1 ENSG00000235608.1 1400119 1.0 0.0 4457 39352
Expression level of Genes
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miRNAs possibly regulated by vista43886[chr4:1339085-1339471]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results